Tachysurus vachellii: 132848699
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Entry
132848699 CDS
T09596
Symbol
pcdh7b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132848699 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132848699 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132848699 (pcdh7b)
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132848699 (pcdh7b)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132848699 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
LYRIC
Fibulin_C
MLANA
Mid2
Motif
Other DBs
NCBI-GeneID:
132848699
NCBI-ProteinID:
XP_060730631
LinkDB
All DBs
Position
7:15989100..16129888
Genome browser
AA seq
1251 aa
AA seq
DB search
MRNTGTTDCLCYCFLLLQLLTQPSAKQVLRYRLAEEGPADVRVGNVASDLGIVAGSGDVT
FTLESGSEYFKIDNITGDLSTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSVRRIGSGGSTNVDSHMGKRRFDDSASRSSVFELQVADTTDGEKQPQLIIKGALDR
EQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPIL
QLKAMDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMAR
DRGQPPKTDKATMVINIKDENDNVPNIDIRKIGRIYLRDGVANVAEDVVVDTPIALVQVS
DRDKGPNGVVTCTVVGDVPFQLKPASEIEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAV
DSGSPSLSANNSLIVKVGDINDNPPMFSKSTMEVSFPENNAPGERVLTVVALDADSGKNA
EIAYSLDSSVNGIFSIDPDTGDIRVNKILDREQTERYEFKVIAKDKGVPVLQGSATVVVL
VADKNDNEPKFMQDVFTFYLEENLQPNSPVGMVTVMDADKGHNAEMSLYIEEEEEIFSIE
NNTGTIFSTVAFDREQKTTYTFRVKAVDGGDPSRTATATVSLFVMDKNDNPPTVTFPPNS
SYTLLPPSSNMKTVVRTVMATDTDTGLNAELRYSIVGGNPFKLFEIDPATGVILLVSKLE
QKHYGLHRLVVQVNDSGVPSQSTTTLVHVYVNETLSNSTIVESKIAKSLGTPLNADIAGD
PNYDLGKQRLSIAIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQH
DKNKKPKKDKNKRKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPG
SPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSDYS
SQTLNKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLDESETPSSKSSTGPGWEPCPS
LRMPMRGLRRMAVSVRQSIWKMEKKNNKNSRPLPDVAMTGKCTRECDEYGHSDACWMPVR
TSPERRPKATPPKLSTFNSSSAGCSGAEPATSSDPLANGEPSHLLGDRNRNLLNKKMASS
SSSSSAYDAFGSAAFSANNETSRPVEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataccggcacgacggactgcctctgctactgttttctgctactgcagctgctg
actcagccctcggctaagcaagtgctgcgctaccgcctggctgaggaaggtcccgccgat
gtgcgcgttgggaacgtggcttccgacctcggcatcgttgccggctccggggatgtgact
ttcacccttgagtctggctctgaatacttcaagattgacaacatcaccggcgacctgagc
accaacgagaggcgcattgaccgcgagaagctgcagcagtgccagatgatcttcgacgag
aatgagtgctttatagacttcgaggtgtccgtgatagggcccgcgcagagctgggtagac
ctgttcgagggcaaggtcatcattctggacataaacgacaacacgccgtctttcccgtcg
cctgtgctcactttgtccgtagaggaaaacaggccgatcggaacgctttatctgttgccc
acggccacggacagggatttcggcagaaacgggatagagaggtacgagttgattcaggat
agcggagaaagctccgtgcgccggataggctctggagggtccactaacgtcgactctcat
atgggcaaaagaagatttgacgactctgcgagtcggagtagcgtgtttgaacttcaggtc
gcagatactacagacggagagaaacagccgcagctgattattaaaggcgcactggacaga
gaacagcgcgactcttacgagctgactctgcgcgtcagggatggcggcgaccccccgcgc
tcctctcaagccatcctcagagtgatgattacagatgtgaatgacaacagcccgcgtttt
gagaaaagcgtgtatgaagcagatctacctgagaacagctccccaggcgcccccattctc
cagcttaaggcaatggatgctgatgttggggttaacggccagattgaatatgttttcggg
gctgcaactgaatcagtgcgacgactgctgcggttagacgagagcacaggctggcttagt
gtattacacaggattgatcgtgaggaagtaagtcagctgcggttcacggtcatggcccgt
gaccgtggtcagcctcccaagacagacaaggcaacaatggttatcaacattaaagatgaa
aacgacaacgtcccaaatatcgacataagaaaaattggacgcatttacttgagagatggt
gtggcaaatgtagcagaagacgtagtggtagacacacctatagcattagtgcaagtgtct
gatcgcgacaagggaccgaatggtgtggtgacatgcactgtggttggtgatgtgcccttc
caactgaagcctgcgagtgagatagaaggtgacatgaacaaaaagaaatatttcctgcac
acatcagctccactcgactatgaagctgtgcaggagtacaacgtcgtcatagtcgctgtg
gattcaggcagccccagtctgtctgcaaacaactcgttaatagtgaaagtcggagacata
aacgacaatccacctatgtttagcaaaagcacaatggaggtctcatttccagagaacaat
gctcctggtgaacgtgtacttactgttgtggccttggatgcagacagtggtaaaaatgca
gaaatcgcatactcactggactcttctgtaaacggaatattttccattgatccagacacc
ggtgacattcgtgtcaacaaaatacttgatagagagcagacagagcgctatgagttcaaa
gtaatcgccaaagacaaaggtgtgcctgttttacagggctcagctacagtggtggtactg
gtggcagacaagaatgacaatgagccaaagtttatgcaggatgtttttactttctattta
gaggagaaccttcaacccaacagccctgtaggcatggtaacagtaatggatgcagacaag
ggacataatgctgagatgagtctctatattgaggaagaggaagaaattttctccatcgag
aacaacacaggaaccattttttctactgtagctttcgaccgtgaacagaaaaccacctac
acgttccgcgttaaggctgttgatggtggagatccatctcgaacagccacagccactgtt
tcactttttgtcatggacaaaaatgataacccaccaacagtcacttttccccctaacagc
tcatatactctgttacctccatccagcaatatgaaaacagtagtccggacagttatggct
actgatactgacacaggcctcaatgctgaactccgctacagcatagtaggaggcaacccc
ttcaagttatttgaaattgaccctgcaactggtgttatattattagttagtaagctagaa
cagaaacactacggccttcaccgccttgtagtgcaggttaatgacagtggggttccatca
cagagcaccaccacactagtgcatgtctatgtcaatgaaacactctccaactccaccata
gttgaatccaaaatcgccaagagccttggtacaccgcttaacgcagatattgcaggagac
cccaactatgacttgggcaagcagcgattaagcattgctatcggagtggtgtctggcatc
atgactgtcatcctcatcatcctcattgtggtcatggctcgctactgcaggcccaagaac
aagaatgggtatgaggctggtaagaaagaccatgaggacttcttcaccccacagcagcat
gacaagaacaagaaacccaaaaaggacaagaacaaaaggaagtctaagcagcctctgtac
agcagcattgtcacagtcgaggcatcaaaacctaacggacagcgctatgatggcgtcaat
gagaaactctctgacagcccaggaatggggcgttatcgctctgttaatggtgggcctgga
agcccagaccttgcccgccactacaagtccagctcacctctacctactgttcagcttcat
ccacagtcacccacagcagggaaaaagcaccaggctgttcaggatctgcctccagccaac
acgtttgtggggaccggagataacatctccattggatctgaccactgctctgattacagc
agccaaaccctgaacaaatacaacaagcagccattccgccgagtgacgttctcggtggtg
agccagccccaggaccctcaccagggctctctgcagagctgctacgacagtggccttgac
gagtcggagacgcccagcagcaagagctccacaggccccggctgggagccctgcccctcc
ctgaggatgcctatgagaggactacgccggatggcagtgtcggtgaggcagagcatatgg
aaaatggagaaaaagaacaataaaaactctcggcccctgccggatgtagccatgacgggg
aagtgtacgcgcgagtgtgacgagtacggccactcagacgcctgctggatgccggtgcgc
acttcacccgagcgcaggcccaaagccacccctcccaaactctccaccttcaactcgagc
tcagctggatgcagcggcgctgaaccggccacaagctccgatccactcgccaacggagag
ccctcgcacctgctcggagaccgcaaccgcaatctcctcaacaagaaaatggcctcctcc
tcttcctcctcctcagcctacgacgctttcggctcagccgccttctctgctaacaacgaa
acgtctcggcccgtcgaagagattcctctggcacccacaggcgaatataaacccacgcaa
tgcgggacgctcaccaggcgtgaggtttacctgtga
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