Tachysurus vachellii: 132848795
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Entry
132848795 CDS
T09596
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132848795 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132848795 (sf1)
Spliceosome [BR:
tvc03041
]
Complex A
Other components
Complex A specific factors
132848795 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
132848795
NCBI-ProteinID:
XP_060730779
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All DBs
Position
7:19573768..19586258
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AA seq
661 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFDSGPGAGLMPPPGPPASFPLQNFPQMPGAAFPGFPGA
AGSLPNPQLGLPQSQLDMSLKKRKKSRWSSETPDQKTIIPGMPTVIPPGLSREQERAYIV
QLQIEDLTRKLRTGDLGIPVNPEDSRSPSPEPIYNSEGKRLNTREYRTRKKMEEERHSLI
TEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCA
KIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMDNVKKAVEQIRNILKQGIETP
EDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHIASDCK
FTSTYTPRQGDPPQSAQDKARMDKEYLSLMAELGEAPIPASSGGHSNNPQSGPRGTGPNS
NQPPPNRPPWMNSGPSDNRNYHGMHGGPGGHGGPHNFPPPMPNMGGPPMPPNPNGMPPPW
MQPPPPPMGQGPTPHGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPPPP
TSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQPAASSAAQPPPPMGNPSMVPPPPGVQ
PPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPFGMPPAPPPPPPQ
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagcaaacgcaaccccgctggggaagctgcacccgagtatcggcgctaaa
cggggcttcgactcggggcccggtgctggtttaatgcctccgccggggcctccagcctct
ttcccgctccagaactttccccagatgccgggtgccgctttcccaggatttcccggggct
gctggttcattaccaaacccacaactcggccttcctcaatctcagttagatatgagtctg
aagaagaggaaaaaaagtcgctggagcagtgagaccccggatcagaagaccattatccca
ggaatgcccacagttatccctcccggccttagtcgtgaacaagagagagcttatatagtc
caactgcagatcgaagacctgactcgtaaactgcgtacaggagacctgggaatccctgtt
aatcctgaggacagcaggtctccgtctcctgaaccgatctataacagcgaggggaagcgg
ttgaacacacgtgagtaccgcacccgcaaaaaaatggaagaggagagacattcactcatc
actgagatggttgggctgaacccagagtttaagccccctgctgactataagcctccagcc
accagagtcagtgataaagtgatgattccacaagatgagtatccagaaatcaactttgtt
ggacttctcattggaccacgtggcaacacgctcaagaacattgagaaagagtgctgtgct
aagatcatgatccgtgggaagggttctgttaaggagggcaaagtgggccgtaaagacgga
cagatgctaccaggagaggacgagcctctacatgccttggtcactgccaacaccatggat
aatgttaagaaggccgtagagcagatccgtaatatcctgaagcagggtattgagacccca
gaggatcagaatgacctgagaaagatgcagctgagggagctggcacgactcaatggcact
ctgagagaggatgataacaggatcctgcgcccgtggcaaaattcagagcctcgtagcatt
accaacactactctgtgcacaaagtgtggaggagctggacatattgcatctgactgcaag
tttacaagtacttacaccccgaggcaaggcgatccaccccagtcagctcaggataaggcc
cgtatggataaagagtatctgtctttaatggctgaactgggagaggctccaattcccgca
tccagtggtggacacagcaacaacccccaaagtggcccccgtggaactggacccaactct
aaccagccacctccaaaccgtcctccctggatgaactcgggcccttcagataacaggaac
tatcatggcatgcatggcggtccaggtggtcatggaggcccccacaacttcccaccccca
atgcccaacatgggtgggccacccatgcctcccaaccctaacggcatgcccccgccgtgg
atgcagccaccccctccaccaatgggccagggtccaactcctcatggacaccctatgggt
ttgttaccacctcctatgggcatgatgccacctcctccacctccacccaataatcaacca
cccccacccccatcagggcctctgccgccctggcagcagcaggccccaccccctccgccc
accagtagcatggcaaccagtgccccactgccatggcagcagaacacaactaccacatcc
accccagctacaggtaaccttcctccatggcagcaaccccagccagcagcaagctctgct
gcccaaccccctcctcctatgggaaacccctccatggtgccccctcctcctggagttcag
cccccactgccccctggtgccccccctcccccaccacccccaccccctggctcagcaggc
atgatgtatgcaccccctccacctcctccacccatggaccccaactttgttaccatgatg
ggaatcccaggaatgcctccatttggcatgccacctgccccccctcccccaccaccccaa
aattaa
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