Tachysurus vachellii: 132848834
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Entry
132848834 CDS
T09596
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03015
mRNA surveillance pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132848834 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
132848834 (acin1b)
03015 mRNA surveillance pathway
132848834 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132848834 (acin1b)
03041 Spliceosome [BR:
tvc03041
]
132848834 (acin1b)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132848834 (acin1b)
Spliceosome [BR:
tvc03041
]
Complex C
Other components
EJC/TREX
132848834 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
132848834
NCBI-ProteinID:
XP_060730849
LinkDB
All DBs
Position
7:20965441..20990103
Genome browser
AA seq
1440 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLESLQRTSTSH
PGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRMEREAREAAEADDTDSPAGPEEDDHTA
VNDSTSCLPDKHHVASRSFVPEDGGGDQIGPQDPVALGSHRLDAGTASVSHDSADVPTAK
IWRPSFSQEEVATPSPPRAVASLSVRVVGQPERQGVPLIVPRPQQREGTAPVEAGPAHPM
PQLSQSARTQEDSDEDDDDDDDDSDEDDNWGPISRGRKNIHTPPAQRSRRKLQPPQHIPP
HHSPLQLRQPTPPPSPPPELSFPLPDTPKQSPPEQDEPEAPEGAAVSSPVSLQRQESSSS
SRSSSPEPRSQHRPGPLSLLVRKMESEGAFDGGQKKEEEEEGDSTAAAEEQAEAGPGVLV
FSRGVTDVHTSCDSEVVPDHQDSPQVQLPEEPVALPTIPSITESSPLGSVEMKEAEGEQE
ESSQPDEDEKEDNLEGCSEQKEKETEESFNVSSGKREREESPSRVSSDFHHRSPSPSPPA
PTKRARMFSEVPPPECLLSPSKPEQVSVLVSGPQHADVEMETEAPTASPQSSPAKKHEEE
MKEVETDQQGPAEADEETEDSNKAPPSLCPSPPLEKLEAERERESSEETKRATSTEIDHE
RSIERERGRSAEREGEKSRERERERSVESERERSTNVSAEGEKSTDRGKEMSAEEERSTE
REREISTDRQRSTERGSERSEESERFTERGRERSAERERSTVKSTVRERKRLTEKEKKSP
ERHSSPSSQSSSSDSDSESSSSSSSGSSPQDKPSPPSQKDKKKKASSPDDTAEQPSDAAE
KEEPLRDVKQATVAEPTGPVSMELQEQPESESALAHPASQEAPETSESRSDESTTPKAFA
ARKISLTTAKPEGAAVDAESGGGAGRKRRWGSSTAVTAKKPSISITTESLKSLIPDLKPL
QEAVVDLHPDEGRFSGDEDSGQQPERDEDQGLQIRRTVTQVVPSETQENGQKEKEEDEDE
DEEQTEGEKEKPPKKQRRESSSEVAMETQEGDTKKVTPNDSVVRRSISQQKVAVSITIDD
PVRTGRQLSPPRGKTSNIIHVCNLVRPFTLGQLKELLNRTGTVVEDGFWIDKIKSHCYVT
YSSTEEAVATREALHGVKWPSSNPKVLRVDFCEQKELDFHKGLLTGEDPRATAASSRPTA
PPPLVAPTREKERERERDGTATNVRDQWAEREREMERRERTRSEREWDRDKVRDFNRDER
EVARRSRSRDRERRRKERGKSKEKKSEKKDKPEEPPAKLLDDLFRKTKAAPCIYWLPLTE
EQATQKNLERAERMKEREKRRKELQEEEDKKREEERKERARGRERDGGNTASSGGGSSRP
PEGEKDKERERERERERDRGREKEGEKRRDSNRGRGNDSKPVGGSRRSRSHSNPSRDRRR
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaagatgttacgctagatgggaaaccgcttcattcgcttcgtgtggcg
gatttaaaagctgccttggagcaacgagggctggccaaaagtgggcagaaaaatgcgctc
atcaagcgactaaaaggggcactcatgttggagagcctgcagcgaacctccacctctcat
cccggcttgcagcccaactcgcagataggggaggagatgagccagaacagttttattaaa
cagtacctggccaaacagcaagaactcctgcgtcagagaatggagagagaggcacgtgag
gcagccgaggcagatgatacagacagccccgcaggccctgaggaggatgatcacacagct
gtcaacgacagcacctcctgcttgccagacaagcatcacgtagcatctcggtcttttgtg
cctgaggatggaggaggtgatcagataggtccacaggatccagttgctctgggaagccac
aggctggatgcaggcactgcatcagtatcacatgattccgctgatgtccccacagccaag
atctggcggccctctttttcccaggaggaggttgccactccctcccctccccgtgcagtt
gcctctctttcagtacgtgttgttggtcagccagagcgccagggcgtacccctaattgtc
cctcgcccacagcaaagagaaggaactgcccctgtagaagcaggccctgcccatccaatg
ccacagctcagccagtctgctcgcactcaagaggacagtgatgaagacgatgacgacgac
gacgatgacagcgatgaggacgacaactggggtcctatatctcgtggaagaaagaacatc
cacacaccaccagcacagcgttcgcggcgtaagcttcagcctcctcaacacattccaccg
catcattctccactgcaactcagacaacccactcctcctccatctccacccccagagctc
tctttccccttgccagacacccccaaacaaagtcccccggagcaggatgaacctgaagcc
ccagaaggggctgctgtgtcctccccagtttccttgcagcgacaagaatcaagctccagc
tccagatccagcagtcctgagcctcgatcccagcacaggcctgggccactcagtctgctg
gtgcgcaagatggaatctgagggggcttttgatggtgggcagaagaaggaggaagaggaa
gagggagactccactgcagcagcagaagaacaagctgaggctggacctggggtgcttgtg
ttttctagaggagtgactgatgttcacaccagctgtgattctgaggtagttcctgatcat
caagattcaccccaagtgcagttgcctgaggagcctgtggctctacccactataccctcg
atcacagaaagcagccctctggggtcagtggagatgaaagaagcagagggagaacaagaa
gaaagttctcagccggatgaagacgagaaggaagacaacctggagggctgtagtgagcag
aaagagaaggagaccgaggagagctttaatgtatcatcagggaaacgtgagcgagaggaa
tcaccgtctcgcgtatcctctgactttcatcatagatcaccttctccttccccacctgct
cctacaaaacgagcacgcatgttttctgaagttccaccacccgaatgcctcctgtctccc
tccaaaccggagcaggtgtctgtccttgtgtcaggaccacagcatgcagatgttgaaatg
gagacagaagctcccactgcttctcctcagtcctcacctgcaaagaagcatgaggaggaa
atgaaggaggtggaaacagatcagcagggacctgcagaggcagatgaagaaacagaagac
agtaacaaggctcctccttcactttgtccatcgccacccctggaaaagctggaagcagag
cgagaaagagagagctccgaggagaccaaaagagcaacatccacagagatagaccatgag
agatccatagaaagggaaagggggagatctgcagaaagagaaggggagaaatccagagag
cgagaaagggagagatctgtggagagtgaaagagagagatctacaaatgtatctgcagag
ggagagaaatccacagacaggggcaaagagatgtctgcagaagaagagagatccacagag
agagaaagagagatatccactgatagacagaggtccacagagagaggaagcgagagatct
gaagaaagtgagagattcacagagagaggaagagagagatctgcagaaagggagagatcc
acagtgaaatccacagtccgagaaagaaagagattgacagagaaggaaaaaaaatcacct
gaacgacactcatccccctccagccagtcttcatcctctgactctgactcagaatcctct
tcctccagttcctcaggctcctccccacaggacaaacccagcccacccagtcagaaggat
aaaaagaagaaagcaagcagcccagatgatacagccgagcagccctctgatgcagcagag
aaggaagaacctttgagggatgtaaagcaggccacggttgctgaacccacaggtcccgtc
tctatggagctccaggaacagcccgagtcggagagtgcactggctcatcctgcctcacag
gaggcgcctgagaccagcgagtctcgttctgatgagagcaccactccaaaagcgtttgct
gcacgcaagatttcactgacaactgctaaaccagagggcgctgcagtggatgcggagtct
gggggtggagctggcaggaagaggaggtggggctccagtacagcagtcactgccaaaaag
ccatcaatcagcatcaccactgaatcactgaagtctctaatcccagacttgaagccgctg
caagaagctgtggtggacctgcatcctgatgaggggcgtttctcaggggatgaggactcg
ggccagcagcctgagcgtgacgaggaccagggacttcagatcaggcgtactgtaacacag
gtggttccatcagaaactcaagagaatggacagaaagaaaaggaggaggatgaagatgag
gatgaggaacagacagaaggagagaaagagaaaccccccaagaaacagaggagagagagc
tcatcagaggttgccatggaaacacaggagggtgacactaagaaggtgacccctaacgac
tcagtggtgcgacgctctatcagtcagcagaaagtggctgtgtccatcaccatcgatgac
ccggtccgcacaggccgccagctctcacctccccgtggcaaaacatccaacatcatccac
gtctgcaacctggttcgcccgtttactttaggccaactgaaagagctgttgaatcggacc
ggtactgtggtggaggacggcttctggatcgataagatcaaatcccactgctatgtaact
tactccagtaccgaggaggctgttgcaacacgtgaagcacttcatggtgtgaaatggcct
tctagcaaccccaaagtgctccgagtggacttctgtgaacagaaggagctggacttccac
aaagggctgctgacgggtgaagatccacgagccactgcagcttcgagccgccctaccgcc
cctcctccactcgtagccccgacccgagagaaagagcgggagcgagagagagatgggact
gcaacaaatgtgagagaccagtgggccgagagggagcgagagatggagcgtagggaaagg
acacgctcggagagggagtgggacagggacaaagtgcgagacttcaacagggacgaacgg
gaagtggccaggaggtctcgatcacgtgaccgggaaaggcgacgcaaggaacgaggaaag
agcaaagagaagaaatcagagaaaaaggataaaccagaggaacctcctgccaaactcctg
gatgatctgttccgcaaaaccaaagcagctccatgcatatattggctgccgcttactgaa
gaacaggcgactcagaagaacctggaacgtgcagagagaatgaaagagcgggagaagagg
aggaaggagctgcaggaggaagaggacaagaaacgcgaagaggagaggaaggagagagcc
cgaggccgggagagagatggcgggaacacagcaagcagtggaggaggctcaagccgtcca
cccgaaggagagaaggacaaagagagggagagggaaagagagcgagagcgtgatcggggt
agagagaaggagggagagaaaaggagggacagcaaccgcggccgaggcaacgactccaag
ccagtgggtggcagcagacgctcacgaagccacagcaacccctccagggacagacgacgt
tga
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