Tachysurus vachellii: 132848876
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Entry
132848876 CDS
T09596
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132848876 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132848876 (rabgef1l)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132848876 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
132848876 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
132848876
NCBI-ProteinID:
XP_060730919
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All DBs
Position
1:16674586..16682854
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AA seq
475 aa
AA seq
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MSSSTARRGIYVDQAALLCNKGCGFYGNLAWGGLCSKCWRVENPNSRAKQIEEDQKLAER
LQREEEAAYAGINQGAQSGNLSTSLSKPEAKRNTQKSHPVPSGKNFFSTLAKTKSRDVNV
PSQPPPTSTSINQQPVAESDQATRQFIDFLKTLHKPGRDIFKQCHAFCHSVAYKKDLGAE
DLSESVQDFYHNLSERLNSLFKGSPERVEAIMDEVEKYITLQLYEQAFCPESADDEAKDL
TIQKRIRALHWVTVQMLGAPVKQEIPAVSDSLDKAITDIIEMDSKRVPRDKLAYVTRCSK
DIFRAIKYSNKDAASADDFLPVLIYVVLRANPPRLQSNIQYITRFCNPRRLMSGEDGYYF
TNLCCAIAFIEKLDAQSLNLSTEEFELYMSDHVSPDRPQARGCSYPSSSSSQSDPRAGRL
ENDLIEWGDGMEASVQDVLKELHLDSCTPSTSAIDSDNIESEGLPPPLQPQVFAG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagcactgcacgacgagggatctacgtggatcaggcggccctgctgtgcaat
aaaggctgtggtttttatggcaatttggcctggggaggtctctgttccaaatgttggcgt
gtggagaatcccaactcacgagccaagcagattgaggaggaccagaaactagccgagaga
ctgcaaagagaagaagaggcagcttacgcaggtatcaaccagggggcacaatcagggaac
ttgtccacaagtctgagcaaacccgaagcgaaaaggaacactcaaaaatcacaccctgtc
ccatcaggaaagaattttttctccacgcttgcaaagacaaaaagcagagatgtcaacgtt
cccagccagccacctcctacgtcaaccagcatcaaccagcagcccgtcgccgaatcagac
caagccacaagacagttcatcgatttcctcaagacgctgcataagcctggacgggatatt
tttaaacagtgccatgctttctgtcacagtgtagcttacaagaaggatcttggtgcagag
gatctttccgaatctgtgcaagatttttaccataacttgtctgagcgcttaaacagcctc
ttcaaaggaagtccagagagagtagaagcaataatggacgaagtggagaagtacataacg
ctgcagttgtatgaacaagctttctgtcctgaatctgcagatgacgaggccaaagatttg
accatccagaagagaatcagggctttacactgggttacggttcagatgctgggagcccca
gtaaaacaggagattcctgctgtgtcagacagtctggacaaggccattacagatataatt
gagatggactccaagcgtgtacccagggataagttggcttacgtcaccagatgcagcaag
gacatcttcagagccattaagtacagcaacaaagatgccgcgtcagctgacgacttcctt
ccggtgctaatctacgtggtgctgagggccaacccaccccggttgcagtccaacatccag
tacatcacccgattctgcaaccccaggcgtcttatgagcggcgaggatggatattatttc
accaacctgtgctgtgccatagcattcatagagaagctggatgctcagtctctaaacctg
tctacagaggaatttgaactctacatgtctgaccacgtgtcccctgacaggccacaggcc
cgtggatgctcttatccctcatcctcttcatcacagagtgaccccagagccggcaggttg
gagaacgacctcatcgaatggggagacggaatggaggcctctgttcaggatgttctgaaa
gagcttcacctggattcttgtaccccatccacctctgcgatcgactcggacaacatagag
agcgaggggcttccgcctcctctgcagccccaggttttcgctgggtag
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