Tachysurus vachellii: 132848953
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Entry
132848953 CDS
T09596
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132848953 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132848953 (exosc4)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132848953 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
132848953 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132848953
NCBI-ProteinID:
XP_060731046
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All DBs
Position
7:complement(23641115..23643839)
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYMEQGNTKALAVVYGPHEVRG
SRSKSLHDRAVINCQYSMATFSTAERKRRPHGDRKSSEMSLHLKQTFEAAVLTQLYPRSQ
IDIYVKILQSDGGNYSACVNAATLALVDAGIPMRDYVCACTAGFVEDTPLADLCHAEESG
GGTTMSLALLPRSENIALVQMDARLHQDHLPALMEAATVACKGLSKVLDSVVRQHLQEVS
VQTRD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctggactcgaactactgtccgatcagggctaccggttggatgggcgaaaggccaca
gagctgaggaaagtgcaggcgcgcatgggggtgttcgcgcaggcggacggatctgcgtac
atggagcaggggaacactaaagcactggcggtggtgtacggaccacatgaggttcgaggg
tccagaagtaaatctcttcacgaccgagcggtcattaactgccagtacagcatggccacg
ttcagcacggcagagagaaaaagacgaccgcacggcgatcgcaaatccagcgagatgagt
cttcacctgaaacagacctttgaagctgccgtcctcacccagctgtacccacgatcccag
atagacatctatgttaagatcctccagtcagatggtggaaactacagtgcatgtgttaat
gcagctactctggccctggtggatgctggtatccccatgcgtgattacgtgtgcgcctgc
acggccggttttgtggaggacacgccgctggctgatctgtgccatgccgaggagagcggc
ggtggcaccacaatgtccctggcacttctacctcgaagtgagaacatcgcactggtgcag
atggatgcccgtctccaccaggaccacctaccagctctgatggaggctgcaacggtggcc
tgtaagggacttagcaaagtgttggacagtgttgtgcgccaacacctgcaggaggtttct
gtgcagacacgagactaa
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