Tachysurus vachellii: 132849884
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Entry
132849884 CDS
T09596
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132849884 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132849884 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132849884 (ranbp2)
03110 Chaperones and folding catalysts [BR:
tvc03110
]
132849884 (ranbp2)
04121 Ubiquitin system [BR:
tvc04121
]
132849884 (ranbp2)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132849884 (ranbp2)
Chaperones and folding catalysts [BR:
tvc03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132849884 (ranbp2)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132849884 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Pro_isomerase
IR1-M
Zn_ribbon_RanBP
WH1
TPR_16
TPR_2
TPR_1
KaiA
TPR_CcmH_CycH
ARM_TT21_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
132849884
NCBI-ProteinID:
XP_060731876
LinkDB
All DBs
Position
8:5269351..5297841
Genome browser
AA seq
3084 aa
AA seq
DB search
MRRSKADVERYISSVESVSPSQKEKPTKGFLFAKLYFEAKEYELAKRHVSAYLTVQVRDP
KAHRFLGQLYELEDEIEKAVGCYKRSVDLNPAQRDLILKVAELLCSKPELDSRAEFWVEK
AAKLLPGHPAVFDLKEKLLSAQGQRGWNQLYDLLQSELQLRPSDAHVNGRLVQLYCLDGR
LEEAAKHCLAVERAGVLRHSLDWNTTVVHTLQEYVAQPSVLSNEKTYREVQKELLLAHSN
LLRLTLSKKDCKESVTALQIFDHAMQSLKNTATKAMDELLEVFTEMRAHLYLYAGTLLLK
MAVEKEQQWRAVVDLAALCYLLAYQVPRPKIKPEKGDRTSLKPLDALACYRQSQAGHMLL
NLNQDVEPFLTEVVEVFGNRSGQTTLFETLFSSQDLVDLSYIGNDTISNISTKSPDIQEL
SNWDCGSILHCGDLQHLTWLGLQWSMMGQRPAVKDWLKQLFPRLTLETFKLDTNTPESIC
LLDLEVFLCGVVFTCHTQLQEMAKISATSQLHEPRCSPLQLMKLLSSERQREWWDAVYSL
IHKKAVPNTSAKLRMVVQHGLNTLRAREKHGLQPALLIHWAKHLSTMGDGVNSYYDQKEY
IGRSVHYWNVVLPLLEKIEKRRRIPEPLDPLFMHFASKDIQVSEIKNYEEEAMITFATLL
DIEGKTDQAILKLEKLNCISSYWHLARIYQRLSEEAGNGVEETQDMCINFLQQFKKYLSK
VYHASADDMERLPVSLEEIMDLLNDVNQQLGEGGDAVDGILERHPMTSSPRSLTEPAVAT
TPKFSVSSPAKSVLSPSKRSVFSPKTPPHWVEDQKSLLQILCQQVEALKNEVHDLRHNSP
GTTESPFHRVYGGNYTAETFQEPFSAAQSFHGVPLTVATTGPSVYYNQSPAYNSQYLLRT
AANVTPSKAPVYGMNRLPQPHMYAYQQPTHTPPLQTSACMYPQDQVFGTSIRFEPPATNL
LSPYNEEFCSHVSQPSTNPSLPEPGYFTKPAVIPAQSCKSSEGKSVDLKVSFGPQIPVEA
TKVGPGAASQMTPTVAAFKFNSNFKSNDGDFTFSSAEVKNSESLLGLLTSDIPPRTDGHS
ALLSQLQDPTASQTGVFTFGSKNSLGFSFVDGVQDKTTLFGKSDQAYDVSKPVTREESDE
KCVESDDSTHIEEDEDGPHFEPIVPLPNKIDVKTGEEEEEEIFCNRAKLFRFETETKEWK
ERGIGSIKILKHKTSGKYRLLMRREQVLKICANHYITADMVLKANAGSDKSWVWYAMDYA
DEMPKTEQLAIRFKTADEAALFKQKFEEAQRAILKHSKIQGQLKENDSKPSVLEDCRKNV
DLKTLFAKKEGEWDCSVCCVRNDSSSKSCVACSSPNPSVDLKSETKSGAFTFGLRGSSKD
TSGSASFKAFGSQSPFSFKFGTQSTVSQSSQGDAKSGQLEPSADHPISVQSSDSSVQKFS
SSSGVTNFSFGSGFGAQFVKKPGQWDCSTCAVRNEASTSICVSCQTLNASSKNTAATEST
TQSMTLQIPNELKENDSKSSSTSVEKNVDLKTLFAKKEGEWDCNVCCVRNDSSSKECAAC
SSPNPCVESKPGLKPAEGLKSVSVSATGAFTFGLVGGSKDASSEASFKAFGSQIPFSFKF
GTQPSSECESKSQEISNSSNQKINSSSLPSFSFGSGFGSQFKKTDPSDRSSCAERNEPTP
ITCVENQNKTTAVTESTKQSVNSLCSLGSGLAKFVKKVGQWDCDTCLVRNEAAAKSCVSC
NAPNNNRNNEAQWDCDTCLVRNEGTSSHCVSCQKPKPNALSSFSFSTDSQANHPGSSEFT
ASFEASTCQFGQGKKETTTTEVETSSSSSKFSFSVPGLTSGFKFGLKGSESKPADSGSAA
MFLKNIAEQHREKEKDASSSVKSLNNPSDECPLFTGKENAFSFADLAKTSQGNFQFGQKD
PSFKGFAGAGEQLFTSFLQSQKSETSDQEEEDVYKTEENDDIQFEPVVKMPEKVDIVTGE
EDEECLYTTRVKLFRFDHETHQWKERGVGNLKFLKNNQNGRLRVLMRREQVLKVCANHWI
TTTMNLKPLSGSDCAWVWLANDFSDGDPKLEQLAAKFKTPELAEDFKQKFEECQRLLLDI
PLQTPHKLANSDRTANLIQKAEEMKSGLKDLKSFLTYDGVKGKNEESSVKTVNNISALMI
KPHNESTGQTLEWDNYDLQDDVHDESADTSVYASPLASSPLQKNLFRFGESSTGFSFSFQ
PILSPSKSPAKLNQSGASVGTDEEQEISQEEERDGQYFEPVVPMPDVVELLNGEENEQVV
FSHRAKLYRYDKDLSQWKERGIGDIKILQNFDTKRTRLVMRRDQVLKLCANHWISSDMKL
ELMKGTEKAWIWSAFDFAEGEGKVEQLAVRFKLLETANSFKDFFEKAKDAQEKQTLLASA
SSPRETLTSPATLCGKAAIAVLEEMTEEKSEQPSESSHAPTVSLSPHNTSKTVVSPPKFV
FGTDSVQKIFGSPVSSKQIVPGPAASPEDQLSGSDLSSKTAERETVTPFKVPERVSSETH
DIRSAANSCDYDIEIVFEQQPTKEQAELARKLMLPPTFFIYKNNTGYVSDDTDDEDYEMA
VRNLKGKLYPDSATHEPAQASRATEEPECVLVWEKKPTLEEERKAKSLQLPLTFFCGTSS
DADSEPDRAEDFGTELRKVQQAQCEIIGQEKTSEHCSEQPTTADNGRPIDLSTKTQENET
PPDSNTTQDAPLSFIFGSHSTSTFADLAKNSGEFLFAKKDSNFSWANAGAAVFTTTATAS
RNEDEDGSDEDVSNNDIHFEPIVSLPEVEVKSGEEDEKILFKQRAKLYRWDRDLKQWKER
GVGDLKILFHPVKMNYRVLMRREQVLKVCANHTITKYIELKPMNTSNNALVWTALDYTEG
DCKLEQFAAKFKTPEVTESFRKTFTDCQQCISQVDTAQSRPSNPTVFLTIAADNELIGKI
TIELFANIVPKTAENFRVLCTGEKGFGYRNSIFHRIVPDFMCQGGDITKHDGTGGKSIYG
NKFEDENFEVRHTGPGIVSMANRGRNSNNSQFFITLKKSEHLDFKHVAFGIVKDGMDVVE
QMGNLGSRKGEPSKRITVEECGEL
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaagtaaggcggacgttgaacgctacatttcctcagtagagagcgtctctcct
tcacagaaagagaaaccaacaaagggatttttatttgcaaagttatattttgaggccaag
gagtatgaacttgctaaaagacatgtatccgcatatctaacagttcaggtcagagatccc
aaagcccatcgattccttggtcaactttatgaactagaagatgaaattgaaaaagctgtt
gggtgttacaagcgctcggtggatctgaacccggctcagcgtgacctgattctgaaagtg
gctgagctgctgtgcagtaagccggagcttgacagcagggcggaattctgggtggagaag
gctgcaaagcttttgccaggtcacccagcggtctttgacctaaaggagaaattgctgagt
gcacaaggacagagaggctggaatcagctttacgatctgctgcagtctgagctccagctg
cgcccttctgatgcccatgttaatgggagactggtgcagctctactgcctagatggacgt
ttggaagaagcggcaaagcactgcctggctgtggaaagagctggggtcttaagacacagc
ctagactggaacaccactgttgtccacactcttcaggaatatgtggctcaacccagtgta
ttgtctaatgagaagacctatcgtgaggtccaaaaggagctcttactggctcacagtaat
ctgctcaggcttacactttctaaaaaagattgcaaggaaagtgtgactgcacttcagatt
tttgaccacgcaatgcagtctttaaagaatactgcaacaaaagctatggacgagctcctt
gaagtattcacagaaatgagagctcatctatatctttatgctgggaccctactgctgaaa
atggctgtggaaaaagaacagcagtggagagctgttgttgatttagcagctctctgttac
ctgctggcttatcaggttccaagaccaaagataaagcctgagaaaggtgaccgcacatca
ctgaaacctctagacgcattagcttgctatcgtcaaagccaagcaggtcacatgctgcta
aatctaaaccaagatgtggagccatttttgacggaggtggttgaggtgtttgggaacaga
agcgggcaaaccaccctatttgagacacttttcagttcgcaagaccttgtggatctctcg
tacattggcaatgacaccatctccaacatcagcacaaagtcaccggacatacaagagctg
tctaattgggactgtggttccatattgcactgtggagatttacagcacctgacatggctt
ggattgcaatggtcaatgatgggccagagacctgcagtgaaagactggcttaagcagctg
tttcctcgtctcactctggagacctttaagctggacaccaacactccagagtcaatctgt
ctgcttgaccttgaggtgtttctgtgtggtgtagtattcacgtgtcacactcaacttcaa
gaaatggcaaagatttctgctacttcacagttgcatgagccaagatgttcaccattgcag
cttatgaaactcttgtcctcggagagacagagagagtggtgggatgcagtctacagcctc
attcacaaaaaagcagtacctaatacatctgcaaaactgcgaatggttgtccaacatggc
ctgaacacactgcgagcaagagagaaacatggtcttcagcctgcactgctcatccactgg
gccaaacatctcagtacaatgggtgatggtgtaaactcctattatgaccagaaagaatac
ataggccgtagcgtgcactactggaatgtcgtgctccccttgcttgagaaaattgagaag
agacgcagaattcctgaacctcttgatcctttattcatgcatttcgctagtaaggacata
caggtttctgaaattaaaaactatgaagaggaggcaatgataacattcgctacacttctt
gacatcgaaggcaaaactgatcaggctatcttgaagcttgagaagctcaactgcatttct
tcctactggcatcttgctcgtatctatcagagactttctgaagaggcaggaaatggagtt
gaggaaacacaagacatgtgcataaactttctccagcagtttaagaagtacttatcaaag
gtttaccatgcgagtgcagatgacatggagaggctccctgtgtcacttgaggaaattatg
gacttgcttaacgatgtcaatcagcagcttggagagggtggagacgctgtggatggaatt
cttgaaagacatccaatgacttcaagcccacgatcactcacagaacctgctgtggctact
actcctaaattctcagtgtcctctccagccaaaagtgtgctctctccctccaagagatca
gtgttttctcccaaaacaccccctcattgggtggaggatcagaagtcacttttacagatt
ctctgtcaacaagtcgaagccttgaagaacgaggttcatgatctgaggcacaattcacct
ggaacaacagagtccccatttcatagagtgtatggagggaattacacagcagagacattt
caggagcccttttcagcagcacaatcatttcacggagtgccacttactgttgctacaaca
ggtccttcagtatactacaaccagtccccagcatataattcacagtaccttcttcgcact
gctgctaatgtaacaccatccaaggcccctgtctatgggatgaatcgtctcccccagcca
catatgtatgcctaccagcagccaacacatacaccacctcttcaaacatcagcatgcatg
taccctcaagatcaggtttttggtacctctatccggtttgagccaccagcaacaaacttg
ctgtcaccatacaatgaagaattctgcagtcatgtttctcaaccatctaccaatccatca
ttgccagaacccgggtacttcactaagccggctgtaatacctgctcagtcctgtaagagc
agtgaaggcaagtctgtggacttaaaggtgagctttggtccacaaattccagttgaagcc
actaaggttgggcctggggctgcctcacaaatgactcccaccgtagctgctttcaaattc
aattcaaatttcaaatccaacgatggtgactttactttctcatctgcagaggtgaaaaat
agtgaaagcctattgggactcctaacttcagatattcctcccagaaccgacggccattca
gccttactatctcagttgcaagacccaacagcaagtcaaacaggggtctttacttttggg
agtaaaaattctttagggttttcatttgttgatggggtgcaggataaaacaactctcttt
ggaaaatccgaccaagcatatgatgtgagcaaaccagtgactcgggaggaaagtgatgaa
aaatgtgttgagagtgatgacagcacccacattgaagaggatgaggatgggccacatttt
gagcccattgtccctctgcctaataaaattgatgtaaaaactggggaggaagaagaagaa
gaaatcttctgtaacagagcaaaattgttccgttttgagacagaaacaaaagagtggaaa
gaaagaggcattggttctatcaaaatcctaaaacacaaaacatcaggtaaatatcgattg
ttgatgaggcgagagcaagttctgaaaatatgtgcaaatcactacatcaccgcagacatg
gttctgaaagcaaatgctgggtctgataaatcatgggtatggtatgctatggactatgct
gatgaaatgccaaagactgaacagctggctattcgctttaagactgcagatgaagcagca
ttattcaaacagaaatttgaggaagctcagagagctatacttaaacattcaaaaattcaa
ggtcaactgaaggaaaatgactccaagccttctgtacttgaggactgtagaaaaaatgtt
gatttgaaaaccctttttgcaaagaaagaaggtgaatgggattgcagtgtatgctgtgtg
agaaacgactcttcatctaaaagttgtgttgcttgtagcagtcctaatccttccgttgat
ttaaaatctgagactaaatcaggagcctttacttttggacttcgtggaagttctaaggac
accagtggtagtgccagcttcaaggcatttggatcccagagtcccttctcttttaaattt
ggaacacaatcaactgtttctcaatccagtcagggtgatgcaaagtctggtcagttagaa
ccttctgcagatcatcctatatctgtgcaaagttcagattcctctgtccaaaaatttagt
agctcttcaggtgttacaaatttttcatttgggtctggatttggtgctcagtttgttaag
aaaccaggacagtgggattgttccacatgtgcagtgaggaatgaggcttctacaagtatt
tgtgtttcatgtcaaaccttgaatgcttcatccaaaaacactgctgctacagaatctacc
acacagtctatgacacttcaaattccaaacgaattaaaggaaaacgactccaagtcttct
agcacctctgtggaaaaaaatgttgatctgaaaaccctttttgcaaagaaggaaggtgaa
tgggattgtaatgtctgctgtgtaagaaatgactcctcatctaaagaatgtgccgcatgt
agcagtcccaatccttgtgttgaatcaaaacctggattgaaaccagctgagggattgaaa
agtgtctctgtttctgcaacaggagcatttacttttggacttgttggaggttctaaggat
gccagtagtgaggccagcttcaaggcttttggatcccaaattcccttttcctttaaattt
ggaacacagccgtctagtgagtgtgaatcaaaatctcaggaaatttcaaattcctctaac
caaaaaatcaacagctcaagtcttccgagtttttcatttgggtctgggtttggctcccag
tttaagaagaccgacccttcggatcgttcctcatgtgcagaaaggaatgagcctactcca
atcacttgtgttgaaaaccagaacaaaaccactgctgtaacagaatctaccaaacagtct
gttaactctctctgctcattaggctctggacttgctaagtttgtcaaaaaagtgggtcaa
tgggattgtgatacctgcttggtcagaaatgaggcggctgcaaaaagctgtgtttcttgt
aatgctccaaataacaacagaaataatgaagcacagtgggactgtgatacctgtctagtc
agaaatgaaggcacatctagtcattgtgtttcctgccagaaacctaaaccaaatgcactt
tcatcttttagctttagtactgacagtcaggctaaccatcctggaagtagtgaattcaca
gccagctttgaagctagtacttgtcagtttggtcagggtaagaaagagacaacaacaact
gaagttgaaacatcttcaagcagttcaaagttctctttttcagtgccagggttaactagt
ggattcaaatttggtcttaagggatctgaatcaaaaccagctgacagtggatctgctgca
atgtttctgaaaaacattgccgaacaacacagagaaaaagaaaaagatgcatcatcgtct
gtcaagtcattgaataatcctagtgatgaatgtccactgtttacaggaaaggagaatgca
ttcagttttgcagacttggcaaagacttcacaaggaaactttcaatttggccagaaggat
cccagttttaaaggctttgcaggggctggggagcaactttttacctcatttctgcaaagc
caaaagtcagaaacctctgatcaagaagaggaagatgtgtataaaactgaagaaaatgat
gatattcagtttgaacctgtggttaagatgcctgagaaagttgacattgttacgggggaa
gaggatgaggaatgtctgtacacaacacgtgttaagcttttcaggtttgatcatgaaact
catcagtggaaagaacgaggggttggaaacctaaaatttcttaaaaataatcaaaatgga
aggcttagagttctaatgaggcgggagcaagtgctgaaggtatgtgctaatcactggatc
actactacaatgaacttgaagcccctttctggttcagattgtgcctgggtgtggttagca
aatgacttttcagatggagatcctaagttggaacagttggctgctaagtttaaaactcca
gaacttgcagaagattttaagcaaaaatttgaggagtgtcaacgactcctcttggacatt
cctctacagactcctcataaactggctaattcagaccgaacagcaaatctcatacagaaa
gctgaggaaatgaaatctggtcttaaggaccttaaatcattcttgacttatgacggagta
aaaggcaagaacgaggaaagcagtgttaaaacagtaaacaatatctcagcactcatgatc
aaaccccacaatgagagcactggacagactttggaatgggataattatgatttgcaagat
gatgttcatgatgaaagtgctgacacatctgtatatgcttctccactagcaagcagtccg
ttgcaaaaaaatttgttccgttttggagaatcatctactgggtttagtttcagcttccag
cccattcttagtccatcaaaatccccagctaagctgaatcaaagtggggcatctgtcgga
acagatgaggaacaagaaataagtcaagaagaggaaagagatggacagtattttgaacca
gttgtgccaatgcctgatgtggttgagcttttaaatggagaagagaatgagcaggtagtg
ttcagtcacagagcaaagttgtatcgctatgataaagatctcagccagtggaaagaaagg
ggtataggagacatcaaaattttgcaaaactttgatacaaagcgcactaggcttgttatg
agacgtgaccaggttcttaaattgtgtgccaaccactggatatcctcagatatgaaactt
gagctgatgaaaggaacagaaaaagcatggatctggagtgcttttgactttgctgaagga
gaaggaaaagttgaacagttggctgtacgctttaaattgctggagactgcaaattctttt
aaagatttttttgagaaagctaaggatgcccaggaaaagcaaacacttcttgcctctgct
tcttctccaagagaaaccttgacctcccctgcaaccctgtgtggtaaagctgcaattgca
gtgcttgaggaaatgactgaagaaaagtctgaacaaccttctgaaagcagtcatgcacct
acagtgtctctcagtccacacaacacctctaaaactgtggtctctccccccaagtttgtc
tttgggacagattctgtgcagaaaatatttggaagcccagtatcctctaaacaaattgtt
cctggaccagctgcgagtcctgaagatcagttatcaggcagtgatttaagctccaaaact
gctgaaagggaaacagtaactccattcaaagtaccagaaagagtttcctctgagacccat
gatataaggagtgctgccaatagttgtgactatgatatcgaaattgtgtttgaacaacag
cccactaaggagcaggcagaactcgcccgaaagctaatgctgccgccaacattttttatt
tacaaaaataatacaggatatgtgagtgatgatacagatgatgaagattatgagatggct
gtaagaaatctaaagggaaaactgtatcctgattctgccacacatgaacctgctcaagcc
agtagagctacagaggaaccagagtgtgtgcttgtctgggagaagaaaccaacactggag
gaggagagaaaggccaagagcctccagctgcctctcacattcttctgtggtactagtagt
gatgcagactctgagcctgacagggcagaggactttggaacggaactacgaaaggtccag
caagctcagtgtgaaataatcgggcaagaaaaaaccagtgagcactgctctgaacagcct
actacagctgataatggtcgtcctattgacctctctacaaaaacccaggaaaatgaaacc
ccacctgattcaaatacaactcaagatgcccctttatcttttatttttggttctcacagt
acatctacatttgcagacttggcaaagaattctggggaatttctctttgcaaaaaaagac
tcaaacttctcctgggccaatgcaggggcagcagtctttaccaccactgcaactgcttct
cgaaatgaggatgaggatggaagcgatgaagatgtttctaacaatgacattcactttgag
cccattgtttccttacctgaggtcgaggtgaagtctggtgaagaagatgagaagattctt
ttcaagcagagggcaaaactgtacagatgggaccgtgatttgaaacagtggaaagagcgt
ggagttggtgatctgaagatcctcttccatccagtgaaaatgaactaccgtgtcctgatg
aggcgtgaacaggttttaaaagtctgtgctaaccacaccatcacaaagtatatcgagctg
aaacccatgaacacctctaataacgcactggtttggacggctttggactatacagagggt
gattgcaagttggagcagtttgctgccaaatttaagacccctgaagtcacagaatccttc
agaaaaacctttacggattgtcagcagtgcatatctcaagtggacacagcccagtctaga
ccaagcaacccaacagtatttctcactatagctgctgacaatgagctaatcggcaagatc
acaatagagctttttgccaacatcgtccccaaaactgcagaaaacttcagagttttgtgc
actggagagaaaggatttggctacaggaattccatatttcacaggatcgtccctgatttc
atgtgtcagggtggtgatattactaaacatgatggtacaggtggaaagagtatctacggg
aataagtttgaggatgaaaactttgaagtgcgtcacacaggaccaggtatagtgtccatg
gccaatcgaggcaggaactcaaacaactctcagtttttcatcacgttaaaaaaatctgag
catttagacttcaaacatgtcgcttttggcatcgtcaaagacggcatggatgtggtggag
caaatgggaaacctgggctccaggaaaggtgaaccaagcaaaaggataacagttgaagaa
tgcggagagctgtag
DBGET
integrated database retrieval system
