KEGG   Tachysurus vachellii: 132849935
Entry
132849935         CDS       T09596                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
tvc  Tachysurus vachellii
Pathway
tvc04137  Mitophagy - animal
tvc04144  Endocytosis
tvc04145  Phagosome
tvc04148  Efferocytosis
tvc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132849935 (rab5b)
   04145 Phagosome
    132849935 (rab5b)
   04137 Mitophagy - animal
    132849935 (rab5b)
   04148 Efferocytosis
    132849935 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    132849935 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvc04131]
    132849935 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132849935 (rab5b)
   04031 GTP-binding proteins [BR:tvc04031]
    132849935 (rab5b)
Membrane trafficking [BR:tvc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    132849935 (rab5b)
 Endosome - Lysosome transport
    132849935 (rab5b)
Exosome [BR:tvc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132849935 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   132849935 (rab5b)
  Exosomal proteins of colorectal cancer cells
   132849935 (rab5b)
  Exosomal proteins of melanoma cells
   132849935 (rab5b)
GTP-binding proteins [BR:tvc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    132849935 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 132849935
NCBI-ProteinID: XP_060731940
LinkDB
Position
8:complement(6669909..6678499)
AA seq 214 aa
MTTRGNARTNGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKSDLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSSRSCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaccacccgtgggaacgctaggactaatgggaaccttccccagaccaagatctgccag
ttcaagttggtgctgctgggagacatggcagtgggcaagtccagcctggtccttcgcttc
gtcaagggccagtttgatgagttccaggaaaccaccattggagctgctttcttggctcag
tcagtttgcctggacgacacgacagtgaagtttgagatttgggacacagctggacaggaa
cgctaccacagcctggcacctatgtactaccgcggagcccaagcagccatcgtagtgttt
gatattacaaaaccggagacgtttgagcgagcgaaggcctgggtgaaggaactccagagg
caggccagtcccaacatcgttattgcactggcaggaaacaagtcagacctcgctgacaag
agactggtggagtacgaggaagctcagacgtacgctgaagacacaggattgttgttcatg
gagacttctgccaagactgctatgaacgtgaatgagttattcctggccattgcgaagaag
atgccgaaaacagacactcagaacccgacacacgccgcccgacacaggggagtcaacttg
caggacccagacgcccaatccagcaggagctgctgcgggaactag

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