Tachysurus vachellii: 132850016
Help
Entry
132850016 CDS
T09596
Symbol
nalcn
Name
(RefSeq) sodium leak channel non-selective protein isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132850016 (nalcn)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
132850016 (nalcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF5914
PsaF
FAM165
Motif
Other DBs
NCBI-GeneID:
132850016
NCBI-ProteinID:
XP_060732080
LinkDB
All DBs
Position
8:8873203..8960879
Genome browser
AA seq
1745 aa
AA seq
DB search
MCSAGTISALLFPLIHSLYSTASPSMLKRKQSSRVEAQPMTDFGPDETLTDSADILWINK
AWVHSLLRACAIISVISVCMNTPKTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGI
VKGDNSYVKDRWCMFDGFMVVFLWVSLVLQVFEIAKLVDQMSTWRMLRIPRALIMIRAFR
IYFRFELPRTRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGPFNYHCVTNDTKIY
NVTWNSLAIPDTHCSPDGEGYQCPMGFDCVNLEDLGLSRQELGYSGFNELGTSIFTVYEA
ASQEGWVFIMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMW
GSRSSTTSTATTQMFHEDASGGWQLVAVDVNKPHGLAPACLQHLMGSSMFHMFILSMVAM
DVIVASSNYYKGKNHKKDYDEFYLAEVAFTMLFDLEALLKIWCLGFTGYISSSLHKFESL
LVVGTTLHIYPDLYHSQLTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASL
LIVMSAISLQMFCFVEDLDRFTTFPRAFMSMFQILTQEGWVDVMDQTLVAVGRVWAPVVA
IYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEK
FPNRPQMVKISKLPSDFTVPRIRESFMKQFIDRQQQDPSCLFRRLPSASSSSCDHSKRSA
IEDNKYIDQKLRKSIFSIHARNLLEKETTVNKILRACTRQRMLSSSFEGQPTKERSILSV
QHHIRQERRSLRHGSTSQRISRGKSLETLTQDHSSTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRMIVRARFNALKTDPVTGAVKSTKYH
QLYDLLGLVTYLDWVMIVVTICSCISMMFESPFTRVMHVPTLQIAEYVFVIFMSIELTLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWLPTNVPPESGAQLLMMLRCLRPLRI
FKLVPQMRKVVREVLKGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPDIIDEKD
CHGIFRINVSISKNLNLRLRPGETKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVDPTHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPENGGLRAKMYDITQHPFFKRGIAVLVLAQSVLLSVKWDVQDT
VVTVPLATMSVIFTFIFVLEVTMKLIAMSPAGYWQSRRNRYDLLVTSLGVIWIILHFSIQ
NAYTYMMGTCVIVLRFFTICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVV
LFGTVKYGENINRHANFSTAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDMLRYWET
DCGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWN
MVDDKREGVIPTSRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHSGGDVTFHDVLS
MLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIL
SLRESQKQDLRRLLNPPSIETTLPSDEANTNNQDNPTQPEQNSGLQTLLSPTLSDRSSYR
QDSTDRPQRKLGQWRLPTGRTSVKSMVCKMNPVNDEASSGSEVKKWWTRQLTVESDESGD
DLIDI
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgctggaacaatttcagctttacttttcccgttgattcactccctctatagc
acggcaagtcccagcatgctgaagaggaagcagagctcgcgcgtcgaagcgcagccgatg
accgactttgggcctgatgaaacgctcacggacagcgctgatattctttggatcaacaaa
gcatgggtgcactctttactgcgagcctgcgcaataatcagtgtcatctccgtctgcatg
aacaccccaaagactttcgagcactatcccccgctgcagtacgtcacctttactctggac
acgctgctcatgttcctctacactgccgagatgatcgccaagatgcacatcaggggcatc
gtcaagggagataactcctacgttaaagaccgctggtgcatgtttgatggtttcatggtg
gtctttctttgggtgtctcttgtgctccaggtgtttgaaatagctaagcttgtggatcag
atgtcaacgtggagaatgctgcgtatacccagggcactcataatgatccgggcatttcgg
atctatttcagatttgagttgccacgcactcgcataaccaacattctcaagcgatctgga
gagcagatctggagcgtgtccatatttttgcttttcttcctgctcctttatggaatcctg
ggggttcaaatgttcggcccgttcaactatcactgcgttacgaatgatacaaagatatat
aatgtcacgtggaacagccttgccattcctgacactcactgctctccagatggggaggga
taccagtgtcccatgggatttgattgcgttaacttggaggacctgggcctcagtcgacag
gagctgggctacagcggcttcaacgagctgggcaccagcatatttacagtgtatgaggct
gcatctcaggagggctgggtcttcatcatgtaccgtgctattgacagcttcccacgctgg
cgttcctacttctacttcatcacgcttatcttcttccttgcttggctggtcaagaatgtc
ttcatagctgtgatcattgagacatttgctgagatccgggttcagtttcaacaaatgtgg
ggctccagaagcagcactacatccacagcgactactcagatgtttcatgaggatgcgtct
ggaggatggcagcttgtggctgtggatgttaataaaccacatggtcttgctcctgcctgc
ctccagcacctgatgggttcgtctatgttccacatgtttatcctgagtatggtggccatg
gatgtgattgtggcctccagcaactattacaagggcaagaaccataaaaaggactatgat
gagttctacctggcggaggttgctttcacaatgctgtttgatctggaggctcttttaaaa
atctggtgtctgggcttcaccgggtacatcagctcttctctacacaagtttgagtctctg
ttagttgtgggcactactctgcacatctaccctgacctctaccactcccagcttacctac
ttccaagtgttgcgagtggtccgcttgatcaagatctctcctgcgctggaggattttgtt
tacaaaatctttggtccaggaaagaagctgggcagtctggtggtgttcacagcgagtcta
ctcatagtcatgtctgctatcagtctacagatgttctgcttcgtggaggacttggatcgc
ttcaccacctttccacgggccttcatgtccatgtttcagatccttactcaggaaggttgg
gtggacgtcatggatcaaaccctggtagcagtgggacgagtgtgggctccagtggtggcc
atttacttcattctttatcacctgtttgctacgctgatcctgctcagtctgtttgtagct
gtgattctggacaatcttgagcttgatgaggacttaaaaaagctaaagcagctgaagcag
agtgaggccaacgctgacacaaaagagaaactcccgttgcgcttgcgtatattcgagaag
ttccccaacagaccacagatggtgaagatctctaagctgccgtcagatttcactgtgccc
aggatcagggagagctttatgaagcagtttatagaccggcagcagcaggaccccagctgt
ctgttccgcaggctgccgtccgcctcatcttcctcctgtgaccactccaagaggtcggcc
attgaggacaataaatacattgatcagaagctgaggaaatcaatattcagcatccatgct
cgcaatctcttggaaaaagaaacaaccgtcaataaaatcctacgagcctgcaccagacag
cgcatgctgagcagctcctttgagggccagccgactaaagagcgttccatcctcagcgtg
cagcatcatattcgccaggagcgcaggtctctcagacacggttccaccagccagaggatc
agcagaggcaaatctctagagacacttactcaagatcattcaagcactgtacgttatcgc
aatgctcagagagaggacagtgagatcaagatgatccaggagaagaaggagcaggctgag
atgaaacgaaaagttcaagaagaggagctgagagagaatcatccttacttcgacaagccg
ctgtttatcgtgggaagagaacaccgtttcagaaacttctgccggatgatcgtgcgggcc
cgcttcaacgccttgaaaacagatcctgtaacaggagcagtgaagagcacaaaatatcat
cagttatatgatctgcttggcttggtcacatatctggattgggtaatgattgtggttacc
atctgttcttgcatctccatgatgtttgagtctccgttcaccagggtcatgcatgtgcca
actcttcagatagctgagtacgtgtttgtcattttcatgagcattgagctgaccctgaaa
atcatggcagacggtctgttcttcacccctactgcagtcatccgagacttcggtggagtc
atggacattttcatctatttagtcagtctgatcttcctgtgctggctaccaaccaacgtg
cctccagaatcaggtgctcagcttctgatgatgctgcgctgcttgcgtcctctgcgcatc
ttcaagctggtgcctcagatgaggaaggtggtgcgagaggtcctcaaaggattcaaagaa
atcttcctggtgtccattcttctcctgacattaatgctggtctttgcgagcttcggagta
cagctctttgctggaaagcttgccaaatgtaatgatcctgatattattgacgagaaagac
tgccatggcatcttcagaattaacgtgagcatctctaaaaacctcaacctaaggctcaga
ccaggagagacaaaacctggattttgggtccctagagtgtgggcaaatcctcgcaacttc
aactttgacaacgtaggcaatgccatgctggctctctttgaagtcttgtctctgaaggga
tgggtggaggtcagagatgtaattatacatcgagtggatccaacccatggcatctacatc
catgtcttcgtgttcctgggctgtatgattggcctcacgctgtttgtaggggttgtaata
gctaactttaatgaaaacaagggtacagctctgctgacagtggaccagaggagatgggaa
gatctgaagagcaggctaaagattgctcagccactacaccttcccccacgtccagagaac
ggtggtctccgtgccaagatgtatgacatcacgcagcaccctttctttaagcgaggcata
gcagtgctggtcttagcccagtctgtgctactgtctgttaaatgggatgtgcaagacaca
gtagtgacggttcccctggcaaccatgtctgtaattttcacattcatcttcgtcctagag
gtcactatgaagctgatagccatgtcgccggctgggtactggcagagccgaaggaacaga
tatgacctgctggttacgtcgctcggcgtcatatggatcattctgcacttttcaatacag
aatgcctatacctacatgatgggcacttgtgtgatagtgctgaggtttttcaccatatgt
gggaaacacgtgactcttaagatgctgcttctgacggtggtggtcagcatgtacaagagc
ttcttcatcatagtgggcatgttcttactgctcctttgttacgcctttgccggagtggtg
ctctttggcactgtcaaatacggagagaacattaacagacatgcaaacttctctactgca
ggaaaggccatcacggtgctgttccgcatcgtcacaggtgaagactggaataagattatg
catgactgcatggtacagccaccgttttgcacaccagacatgctccgctactgggagacg
gactgtggaaactacgccggtgcccttatttacttctgttcgttctacgtcatcatcgcc
tacatcatgctgaacctgctcgttgctatcatcgtggagaacttctctttgttctactcc
acggaggaggatcagttgctaagctacaacgacctgcggcactttcagataatatggaac
atggtggatgacaagcgggagggtgtgattcccacctccagggtgaagtttctgctgcga
ctgctcagaggccggctggaggtggatctggacaaagacaagctgctctttaagcacatg
tgctatgagatggagcgactgcacagtggtggagatgttaccttccatgatgtgctgagc
atgctgtcctaccgctcagtggacatcaggaagagtctgcagctggaagagttgctggca
cgagaacagctggaatacaccatcgaagaggaggtggccaaacagaccatccgcatgtgg
ctgaagaagtgcctcaagcgcatccgagccaagcagcagcagtcatgcagcatcattctg
agtctgcgtgagagtcagaagcaggacctacgtcgcctactcaacccacccagtattgaa
actactttgcctagtgacgaagccaacaccaataaccaggacaaccctacacagcctgag
cagaacagtggcttgcagactctgctgagccctactctgtcagaccgtagcagctacagg
caagactctacagatcgcccccagaggaagctggggcagtggagactgcccacaggacgc
accagcgtgaagtccatggtgtgcaagatgaacccagtaaacgacgaggcctcctcgggc
tcagaggttaaaaagtggtggactcgacagttaaccgtggagagcgacgagagcggtgat
gacctcattgacatttga
DBGET
integrated database retrieval system
