Tachysurus vachellii: 132850043
Help
Entry
132850043 CDS
T09596
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132850043 (pcdh17)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132850043 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
132850043
NCBI-ProteinID:
XP_060732142
LinkDB
All DBs
Position
1:19497547..19556000
Genome browser
AA seq
1131 aa
AA seq
DB search
MALVSRGMYLSVLSFLLLWAQTLTLKNLNFTISEEKNQGVIGNIAKDAGLELREQGKKSN
FRVLENSAPHLIDVDPESGLLFIKQRIDRETLCKRNPKCQLSMEVFANDKEIYMIKVDIQ
DINDNAPSFPSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDV
KSRGDGTKFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVIDSNDNSPVF
EQSSYVVEIPENSPPGTVLIDLNATDPDEGINGQVTYSLSFYGSDRIKELFSIDPKTGVI
KIQGKIDYEENPIIEIDVQAKDQGPNPVPGHCKVTVKVLDKNDNWPSIGFVAVRQGAVSE
AAPPGTVIALVRVTDKDSGRNGQLQCRILGNVPFRLEENSDNFYTVVTDRPLDREVKDEY
NITIMAKDSGNPPLNATKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHD
PDLGQNGTVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSG
NPHLESNTTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHVITTVRAVDNDFGE
SGRLTYEISDGNEEHLFEIDSVTGEVRTAQPLWEEVSSVVELIIKVTDHGKPTLSAMAKL
VVKAYSGPLPEGEPRINAEQHGWDVSLPLIVTLSVISFMLMAAMIAVAIKCKRENKEIRT
YNCRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQ
TRLPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTETPVNRMSIIQTDNFPT
EPNYMGSRQQFVQSSSTFKDPERVSLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMK
ATGLKPQPLEQEEDCVNCTDECRVLGHSDRCWMPQFPAPGMAQAEGLDYRTNLFVPAGME
AVATEPESYEATGNTSGKKTFCTFGKERRDHAVLVANVKPYLKGKRALSPLLQEVPSASC
SPTKGTKGVADGAEVNPSTSHYEGPNGLYTSPGKQSREQGYCALAASDPVAKVLLEARSR
ISQETANEPDGALEHGGGEPSRGGMDAEQVVRDIDKLLQDCRGNEAAVMRK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtgtcgagaggaatgtacctctctgttttgtctttccttctcttgtgggca
caaacccttacgttaaaaaacttgaactttacgatctcagaggaaaagaaccagggtgtg
attggaaacattgccaaagacgcagggctggagctgagggagcagggcaaaaaatccaac
ttcagggtgctggagaattcagctccacacctcatagacgtggaccctgaaagtgggctg
ctctttatcaagcaaaggattgatagagaaacactgtgcaaacgaaaccctaagtgccag
ctctctatggaagtctttgccaatgacaaagagatctacatgattaaggtagacatacag
gacataaacgacaatgcgcccagctttccttctgatcagattgacattgatatttcagag
aatgccgcccccggcacccgctttcccctagccgctgcctacgaccccgacacccgggaa
aacggccttaaaacatatcaaatcacgcgagacgattacagcatattttctctggatgtg
aaatccagaggagatggaactaaatttcctgagctggtcgtccagaggtctttagataga
gaggagcgcagccatcataccctcattataactgctacagatggaggggagtatccaaag
tcgggtacaatgcaaatcaatgtgaaagtaattgattcaaatgacaatagccctgttttt
gagcagtcctcttatgttgtggaaattccagagaattctccgcctggcacggtactgata
gatttaaatgctactgaccctgatgaaggaattaacgggcaggtaacctattctttgagt
ttttatggctcagatagaatcaaagagctgttctctatagaccccaaaacgggcgtcata
aagattcaggggaaaatcgactatgaggaaaacccaattatagaaattgatgtgcaggca
aaggatcaaggtccgaatcctgttcctggccattgcaaagtcactgttaaagtgcttgac
aagaatgacaattggccatcaataggctttgtggcggttcggcagggggcagttagtgaa
gcagcgcccccagggactgtcattgctttggtgagagtgacagacaaggactctggccgc
aacgggcagctccagtgtagaattttaggcaatgtcccctttagacttgaagagaactcg
gacaatttctacacagtggtgacagatagacctctggatcgagaagtgaaggatgaatac
aacattacaatcatggccaaagacagtggtaaccctccactgaacgccacaaaatctttt
acagtcaaaattctggacgagaacgataacgcgccaaggttcacaaagatggtttattta
cttcaggtgcctgaaaacaacatcccaggagaatatcttggttcagttctggctcatgac
ccagatttgggccaaaatggaactgtttcctattcccttcttccatcaaacgtgagcgag
gaatccattaccacatacgtgaacatcaaaccgaccgatggggccatttatgccctaagg
agtttcaattatgagcagaccaaatattttgatttcaaggtccaggctaaggactcaggt
aatccccatctggagagtaacactacagtgcgtgtgagtgtgctcgatgtcaacgacaac
atcccagtcattgtgctgcccctgttgcaaaacgatacggcagagatccacgtcccgcgc
aatgttggcgtaggccatgtgatcacaacggtgagagccgtggacaacgacttcggtgag
agcggccgccttacctacgagatctcggatggcaatgaggagcacttgtttgagattgat
tcagtcactggagaggtgaggacagctcagccactatgggaggaggtgtcttctgtggtg
gagctcatcatcaaagtgacagaccacggaaagcctacgctgtccgccatggccaagctc
gttgtgaaggcgtattcagggccgctgcctgaaggtgagccgcggataaacgccgagcag
cacggctgggacgtgtcgctccctttaattgtcacgctcagcgtcatttccttcatgctg
atggcagccatgatcgcagtcgccatcaagtgcaagcgggagaacaaggagatccgcacc
tacaactgccgcatcgccgagtactcacacccacagctgggcaagggcaaaaagaagaag
atcaacaagaatgacatcatgcttgtgcagagcgaggtggaggaacgcgacaccatgaac
gtgatgaatgtagtgagcagcccctcactggccacctcgccgatgtacttcgattaccag
acacgccttcccctgagctcgcccaggtccgaggtcatgtacctcaaaccgacagccaac
aacctcagcgttccccaaggacacgtgggttgccatacgagtttcaccgggcctgtgact
agcaccacggagactccggttaacagaatgtcgataattcagaccgacaacttccccacc
gagcccaattacatggggagcaggcagcagtttgttcaaagcagttcaacatttaaggac
ccggagcgcgtgagtctgagggacagcggacacggggacagtgaccaggccgacagcgat
caggacaccaataagggctcgtgctgcgacatgtccgccaaggaagctctgaagatgaag
gcaactgggctcaagcctcaacctcttgagcaggaagaggactgtgtgaactgcaccgac
gagtgccgggtcctgggtcactcggaccgctgctggatgccacagtttccggcaccgggc
atggcgcaggctgagggactcgactaccgcaccaacctttttgtacctgcaggaatggag
gctgtggctaccgagccagagagttatgaagcaacgggcaacaccagcggcaagaagacc
ttctgcacttttggcaaggagcggcgtgatcatgcagtcctggtggccaacgtcaagccc
tacctcaagggcaagcgtgcgctcagtccactgctccaagaagtgccctcggcctcgtgc
agccctaccaagggaaccaaaggcgtcgcagacggagctgaggtcaatcctagcaccagc
cactacgaagggcccaatggactttacacttctcctggaaagcagagtagagagcagggg
tactgcgcattagccgcctcggatcctgtagccaaagtgctcctcgaggcacgttcacgc
atcagccaggaaacggcgaacgaaccggatggagcgctggagcacgggggaggagagcca
agccgaggaggcatggatgccgagcaggtggtcagagacatcgataaacttctgcaggac
tgccgaggcaacgaagctgcagtaatgaggaagtga
DBGET
integrated database retrieval system
