Tachysurus vachellii: 132850058
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Entry
132850058 CDS
T09596
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132850058 (ift88)
Cilium and associated proteins [BR:
tvc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
132850058 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_14
TPR_19
TPR_7
TPR_16
CFAP70_TPR_C
TPR_11
ANAPC3
TPR_17
TPR_9
TPR_10
RMD1-3
ARM_TT21_5th
DUF6340
TPR_CcmH_CycH
TPR-S
TPR_15
DUF6584
CFAP70_mid_TPR
TPR_MalT
ARM_TT21_C
ARM_TT21_2nd
RPN7
TTC22_N
DUF2225
HAT_PRP39_C
DUF2989
Coatomer_E
TPR_Psidin_N
RNPP_C
Foie-gras_1
DUF5588
Nab2
Motif
Other DBs
NCBI-GeneID:
132850058
NCBI-ProteinID:
XP_060732171
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All DBs
Position
8:complement(10321128..10333227)
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AA seq
853 aa
AA seq
DB search
MYKSMMENVHLVAEEEEDLYSGYNDYNPTFDSEDLDNDVGFQQAVRTSHGRRPPMTAKFP
STAVGGRPIGTAFGLRTAMSPSIGRPMTGAVQDVTARPMTALRAAGYTSSLTKGSTFDPL
GQSRGPAPPLEAKNEETPEEKIKILEKKVNDLIEESCMAHANGDLQLALEKAKEAGRKER
VLLRQREQSGTADHINLDLTYSVLFNLANQYANNDMNTEALNTYQVIVKNKMFNNAGRLK
VNMANIYFKQKNYPMAIKFYRMALDQISNVHTEMRIKIMQNIGVAFIRMGQYSDAITSFE
HIMSESPNIKTGFNLILCYYAAGDRKMMKKSFQKLICVPLGIDEEEKYISSNDDPHTSLL
IEAIKNDQLHQMERERKALAEKYIMTSAKLIAPAIESTFAAGFDWCVDMVKGSQYVELAN
DLEINKAITYLRQRNFNQAVDTLKAFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAEL
AMNADRYNPAALINKGNTVFVKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLGRLE
EALDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLISVTPTDPHVLSKLGEL
YDSEGDKSQAFQYYYESFRYFPSNIHVIEWLGAYYIDTQFCEKAIQYFERATLIQPNHVV
WHLMVASCYRRSGNYPRALETYKDIHRKFPENAECLRFLVRLCTDMGLKEVQDYATKLKK
VERMKEIREQRVKSGRENGARSRREGSASSVNQKESSPKAMHTPSNKVSDMDIKPDSGQS
SHGASAKGERLGVKLRSLPGPHEPYEASTPADIDASYVDPLGPQMERPKTAAKKRTEEDE
FADEELGDDLLPE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagtctatgatggagaacgttcatcttgtagccgaggaggaagaagatctgtat
tcaggatacaatgactacaatcccacatttgactcagaggatctggacaatgatgttggg
tttcagcaagctgtgaggacgagtcatggcagacgaccacctatgactgcaaaatttccc
agcactgctgttggaggcagacctataggaacagcttttggtctccgtacagctatgagt
ccctcaataggaaggcctatgactggggcagtgcaggatgtgactgcacgtcccatgact
gcattgcgagctgcaggatacacatcctctttaactaaaggctccacttttgatccactt
ggacaatcaagaggtccagctcccccattagaagcaaaaaatgaagaaacaccagaagag
aagattaagatattggaaaagaaagtgaatgatttgattgaggagagctgtatggcccat
gcaaatggtgatcttcagctggctctagagaaggcaaaagaagctggtagaaaagaaagg
gtgctgttgagacaaagagagcaatctggcactgcagatcatatcaatttggatttaacc
tattcagtgctgtttaatttggcaaaccagtatgctaacaatgacatgaatacagaagcc
ttgaacacttaccaggtcattgtgaagaacaagatgtttaacaatgcaggacggttgaaa
gtgaatatggctaatatctactttaaacagaagaattatcccatggcaattaaattttat
cgtatggctttagaccaaatctctaatgtacacacagagatgaggattaaaatcatgcag
aacattggtgttgcattcatacgcatgggccagtactcagacgccataacttcctttgag
cacattatgagcgagagtcccaacattaagacgggcttcaacctaattctatgctactat
gccgctggagaccgtaaaatgatgaaaaaatctttccagaaactaatctgtgtgcccctg
ggcattgatgaggaagaaaagtacatctcttcaaatgatgacccccatacaagcttactg
attgaagccatcaaaaacgatcagctgcatcaaatggagcgagagagaaaagctctggct
gagaagtacatcatgacttcagcaaagcttattgctccagctattgagtccacttttgca
gcgggatttgactggtgtgtagatatggttaaaggttcacagtatgtggagctggccaat
gatctagagattaacaaagccatcacctacctgagacagaggaactttaaccaggcagtg
gacacactgaaagcctttgagaagaaagatagccgggtgaagagcgctgctgctacaaac
ctttcctttctctattttttggagaaggattttgaccaagctgatcgctatgccgagttg
gccatgaatgctgatcgctacaatcctgctgccctcattaataaaggcaacacagttttt
gtgaagcaagactacgagaaagcagctgaattttataaagaagcactgcggaacgactca
tcctgcacagaggctctatataatttagggttgacctataagaaactggggcgtctggaa
gaagctcttgactgcttcctgaagctccatgccatccttaggaacagtgcacaagttatg
tatcagctggccaatctatatgaaatgttggaggatcctcaccaggctattgagtggctc
atgcagctgatcagtgtcacccccactgaccctcatgtacttagcaaactaggagagttg
tatgacagcgaaggcgacaagtcacaagccttccagtactattatgagtctttcagatac
tttccatcaaacattcatgtcattgaatggttgggagcatattatattgacacccagttt
tgtgaaaaagcaattcagtattttgaaagagcaacactcatccagccgaatcacgttgtg
tggcatttaatggtcgctagctgttataggagaagtggaaattatccgagagcactcgag
acctacaaagacattcatcggaaattccctgaaaatgcggaatgtctacgattcctcgtg
aggttgtgcacggatatggggttaaaggaggtacaagattatgccaccaaactcaaaaaa
gtggaaaggatgaaggagatcagagaacagagggtgaagtcaggaagggagaacggtgct
cgaagccggagagaaggcagtgccagcagtgtgaatcaaaaagagagtagtccaaaggcc
atgcacactccctctaacaaagtcagtgatatggatatcaagccagacagtggacagagc
agccatggtgcaagtgccaaaggggaaagactaggtgtcaagctgaggtcacttccagga
ccccatgaaccttatgaagcaagcaccccagcagacattgatgcttcttatgttgaccct
ttggggccacaaatggaaagaccgaagactgcagcaaagaaacgcacagaggaagatgag
tttgctgacgaagagttgggggatgacctactaccagaatga
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