Tachysurus vachellii: 132850070
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Entry
132850070 CDS
T09596
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132850070 (sox1a)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132850070 (sox1a)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132850070
NCBI-ProteinID:
XP_060732196
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All DBs
Position
8:10512816..10514378
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AA seq
345 aa
AA seq
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MYSMMMETDLHSPGPQTNTNPGQTGPNTGNKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAATGAGVGLGVGMSAAGVGQRLESPGGHGGSAGAGYSHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYGQHPGSGAHHHHHPHAHHHHPHNPQPMHRYDMSALQYSPISS
SQSYMSASPPGYGGISYSQHQNAGVPSSAAIGTLSSLVKTEPNVSPPVSTHSRGPCQGDL
REMISMYLPAGETGEPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttgcactccccgggtccacagactaatacaaac
ccggggcagacaggtccgaacacggggaacaaagctaaccaagagcgcgtcaaacgtcct
atgaatgcttttatggtgtggtcccgcgggcagcgccggaaaatggctcaggaaaatccg
aaaatgcacaactctgagatcagcaagagactcggcgcagagtggaaggtgatgtcagaa
gctgaaaagcggccctttatcgacgaggcaaaacggctgcgcgccctgcacatgaaagag
catccggattacaaataccgaccgaggcgcaaaaccaagacgctgcttaaaaaggacaag
tactctctggctggcggtctgctcggcggagcggccacgggagcgggagttggtctcgga
gtgggcatgagcgcagctggagtaggccagaggctagaaagccccgggggtcacggaggc
tcggccggcgccggttactcgcacatgaacggctgggcaaacggtgcgtattcaggccaa
gtcgctgccgctgccgctgctgctgctatgatgcaggaggcacagcttgcctatggtcag
catccaggcagcggggcacaccaccaccaccacccgcatgcccaccaccatcatccgcac
aacccgcagccaatgcaccgttacgacatgagcgctctgcagtacagccccatatccagt
tcacagagttacatgagcgcgtcgccgcccggctacggagggatttcttattcccaacac
caaaatgcgggtgttccgtcgtcggccgccatcggaacgctgagctctttggtcaagacc
gagccgaacgtaagtcctccagttagcacgcactccagaggcccgtgccagggagacttg
agggagatgattagcatgtatttaccggctggagagaccggagagccgtccgttcaaagc
agactgcacgctttaccgcaacactatcagagcacgacggccggagtaaacggaactgtc
ccgctcacgcacatttga
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