Tachysurus vachellii: 132850144
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Entry
132850144 CDS
T09596
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132850144 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132850144 (usp9)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132850144 (usp9)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132850144 (usp9)
Ubiquitin system [BR:
tvc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132850144 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
DUF2259
DUF2014
Motif
Other DBs
NCBI-GeneID:
132850144
NCBI-ProteinID:
XP_060732314
LinkDB
All DBs
Position
8:13307153..13336374
Genome browser
AA seq
2608 aa
AA seq
DB search
MTATTRGSPMGGNESQEQGQAPDGQSQPPLPQNQTSTPTSSNETSPVSPPDEQVQGDCTG
QLEEEEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVTKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQIL
HDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKNMEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEAEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRSNDKWVIPALKQIREICSLFGEAPQNLRRKMPINLTS
LASQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKVEHTDFDPQTVRP
GSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKL
MGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRVYMMD
DLELIGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLK
ASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGK
HITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGDIIDPA
DDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVES
CLPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAICLDH
AKLGESSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLRSGGLP
LVLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVAEGNIPV
SPINQATHDQALVLQSALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDIGVIR
AVQKIVWASGCGSIQLVFSSIEEISNIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALIP
TALDALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTV
LGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKRTGET
GVEETILEGHIGVTKELLAFQTAEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKS
GEFPPEQAIPVCSTPATITAGFELLVALAVGCVRNLRQIVDTLTDMYYSGCEALTEWEYL
PPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQ
DNESNVDPRDEVFSYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQ
GCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQ
QVIQQNEPSEPEAPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGSEGETNRWYKFDD
GDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKD
GELVKYISELSVSSKPNQIKMPPAIECSVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEMAKISIQLTARFLFSTGFHTKKAVRGPASDWYDALCILLRHSK
NVRCWFAHNALFSYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLHDGPYPSPVASPGP
SSQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVP
STFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLANPYGDP
SLTQPIMPLHQMVAEILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLVEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNAQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRKLSSPQQLL
PGEVTGQQQHTEQDEQEAPDDQDSSPPEDTSLYPHSPGTQYQQQNNLPHGQPYTGPAAQH
MNNPQRPGPRAQENWEPPEEVPPAQTKE
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgactgccacgacccgtggctcccccatgggggggaatgaaagtcaggagcagggccaa
gctccggacggtcagtctcagcccccattgccccaaaaccagacgtccactcccacatca
tccaacgagacctctccagtgagtcctccagatgagcaggtccagggagactgtaccggc
cagctggaggaggaggaggagccggctttccctcacgcagacctggccaaactggatgac
atgataaacagaccccgctgggttgttccggttttgccaaagggtgaattagaagttctt
cttgaagctgctattgatctttgtaaaaaaggactcgatgtcaagtgcgaagcctgccag
agattttttcgcgatggtttgacaatatcgttcaccaaaatactgactgatgaggctgtc
agtggatggaaatttgaaatccataggtgcataatcaacaacacccatcgtctgatggaa
ctatgtgtgaccaagctctctcaggattggtttccccttctagagctcttggccatggcc
accaacccccactgcaagtttcacatttacaatggtacccggccctcagagacggtgcct
gctggggtgcagctggccgaagatgagctcttcgctcgtccgcctgaccctcgctctccc
aagggctggctggtggatttaataaacaagtttggcacattaaacgggtttcaaattctg
cacgatcgattcatgagcggtcaagctctgaacgttcagatcatcgccgcactcataaag
ccttttgggcagtgctacgagtttctcactttgcacacggtgaagaagtacttccttccc
gttatagaaatggttcctcagttccttgaaaacctcactgatgaggagctgaaaaaggaa
gccaaaaatgaagccaaaaatgatgctctgtctatgataatcaagtctttgaagaacctg
gcttcacgagtaccagggcaagaggaaacagtgaagaacatggagatctttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaacgcactaaatgaa
gtaaataaggtgatttcaagtgtctcgtactacacacaccgtcacggcaacccagaagag
gcagagtggctcactgccgagcgcatggcggagtggattcagcaaaacaacattttatcc
attgtgctgagggatagccttcatcagccccagtatgtggagaagctagagaagattctg
cgctttgtcattaaggagaaagctcttacacttcaagacctggataacatttgggctgcc
caggctggaaagcatgaggctattgtcaagaatgtccatgatcttctcgcaaaattggca
tgggatttctcacctgaacaactagaccatctttttgactgttttaaggaaagctggaca
aatgcgagtaaaaagcaacgagagaagctactggaactaattcgtaggctggcagaagat
gataaagatggtgtgatggcacacaaagtgctcaatctgctgtggaacctggcccatagt
gatgacgttcctgtggatatcatggatcaagctctcagcgctcatattaagatcttggac
tacagctgttctcaggaccgggatacccagaagatccagtggattgatcgcttcattgaa
gagttgcgatcaaatgataaatgggtcatacctgcactgaagcaaattcgagagatctgc
agtctgtttggagaggctcctcagaatctcagaaggaaaatgcctattaacttaacaagc
ttagcaagtcaaacgcagaggagcccacacgttttctatcgccatgaccttattaaccaa
cttcagcacaatcatgcactggtcactctagtagctgagaatctgtctgcatacatggaa
aatatgagacagttctccaaagtagagcacacagactttgaccctcagaccgtcaggcct
ggaagtcgatacagtcatgtgcaggaggtgcaggagcgcctgaactttttgaggttcttg
ttgaaggacgggcagctgtggctctgtgcccctcaggccaaacagatctggaagtgccta
gcagagaatgcggtgttcttgtgtgatcgtgaagcctgtttcaaatggtactccaaactg
atgggggacgagccggaccttgatcccgacataaacaaggacttttttgagaacaacgtg
ctccagctcgatccttctcttctgaccgaaaacggcatgaaatgttttgagcgtttcttt
aaagcagtgaactgcagagagggcaagctggtggccaagcgcagagtctacatgatggat
gacctggagctgattggactggattacctgtggagggttgtgatccaaggaagtgatgac
attgcgaaccgagcaattgatttgcttaaagagatttatacaaaccttggaccaaaatta
caagcaaatcaggtggagatccatgaagattttattcagtcttgctttgaccgactcaaa
gcctcctatgacacgctgtgtgtgctggatggagataaggatagtattaactgtgccagg
caggaggccatccgcatggtgcgcgttcttactgtgcttagggagtacatcactgaatgt
gacagtgactaccacgaggagaggaccattttgccaatgtccagagcatttcgtgggaaa
cacattacccttatcgtgcgatttccaaaccaaggtcggcaggtggatgatctggacatc
tggtcccacaccaatgacaccattggttctgtgagacgctgcattctcaatcgaataaag
gctaacagcgcacacaccaagattgagctcttcattggcggggacataatcgatcctgct
gatgacaggaaattgattgggcaactcaacctcaaagacaaaacacttatcacagccaag
ctcacgcaggtcagtgccaatatgccttcaagcccagacagctcctctgactcttccacc
ggctcccctgggaaccatggcaaccactatagtgatggaccaaacccagaagttgaaagc
tgccttcctggagtgataatgtccctgcacttgcgctacatctctttcttgtggcaagtt
gctgacctgggctgtaatctcaacatgcctcttctgcgtgatggagctcgggttcttatg
aagctcatgccaccagataatactacagtggaaaacctgcgagctatctgcctggatcat
gccaaacttggagaaagcagccttagccccacccttgactctcgcttttttggaccatca
ccttcacaagtcctttacttgatagaggtggtttatgccctactgatgccagctagtggc
acactgggagaggatgcaagtgatttccagtacaatttcttgaggagtggcggtctaccg
ttggtattgagcatgctgacccgaaataatttccttccaaatgctgacatggagacgcgc
cgaggagcctatctcaatgcactaaaaatagctaagctcctgcttacagctgtaggcttt
ggtcatgtgaaggctgtggctgaagcttgccagcctgtggcagaggggaacatcccagtg
tcacctataaaccaggccactcatgaccaggcgctggtgcttcagagcgcgctgcaaaac
atcccaaatccctcggccgagtgcatgctgcgcaacgtggccatccgtctggctcagcag
atctctgatgagaattttttccaggcctctaagtatatcccagacatcggtgtgatcaga
gcagttcagaagattgtctgggcctctggttgtggttctattcaactagttttcagttcc
attgaggagatcagcaacatctacgaaaagactaatgcagggaatgagccagatgcagag
gatgagcaggtgtgctgtgaggccttagaggtcatgaccctttgctttgctcttatcccg
actgcgctagatgcacttagtaaagagaaagcctggcagactttcatcattgatttactg
ttgcactgtcagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggcc
actcggtgttgcatgggtcacaggcctcttctgttctttattaccctcctcttcacagtt
ttaggtagcactgcaaaagaacgagccaagcacgctggtgattactttacactcttgagg
cacttgctcaactacgcatataatagcaatatcaacctccctaatgctgaagttcttctt
aacaatgagattgattggttgaaaagaatcaaggatgaggttaagagaactggagagact
ggggtggaagaaaccatattagaaggtcacattggtgtcacaaaggagctactggctttc
cagacagcagaaaagaagtactatataggttgcgaaaagggaggcgctaacctcatcaag
gagctgatagatgacttcatcttcccagcctctaatgtgtatctgcagtacatgaagagt
ggcgagttccccccggagcaggccatacctgtgtgtagcacccctgccacaatcacagct
gggtttgaactcctggtagcacttgctgttggatgtgtgcgcaacctcagacagattgtt
gacaccctaactgacatgtactactcgggttgtgaggcacttacagaatgggagtacttg
ccaccagtgggcccaaggcccacaaaaggctttgttgggctgaagaacgcaggtgccact
tgctatatgaactcagtaatccaacagctttatatgatcccacccatcagaaatggcatc
ttggctatagagggcacaggcagtgatgtggatgatgacatgtctggagatgagaaacaa
gataatgagagcaacgtggatccacgtgatgaggttttcagttatcaccaccagtttgat
gacaagccatcgctcagtaagtcggaggacagaaaagagtacaacattggagttctgcgt
cacctgcaggtgatctttggacaccttgcttcttccagactgcagtactatgttcccagg
ggcttttggaaacagttcaggttgtggggtgagccagtgaacctgagagaacaacatgat
gccctggagttcttcaactcgcttgtggatagtttagatgaggctttaaaagcattgggc
caccctgccatgctgagtaaagtcctcggtggttcctttgctgatcagaagatctgtcag
ggttgccctcataggtatgagtgtgaggaatcctttacaacactgaatgtagatatcaga
aatcatcagaatctgcttgattccatggagcagtatgtgaagggtgacttgcttgagggt
gctaatgcttaccactgtgaaaaatgcaacaagaaagtggacacagtgaagcgcttgctc
attaagaaactacctcctgtactggccatccagttgaagcgatttgattacgactgggaa
cgggagtgtgctattaaatttaacgattactttgagtttccccgggagctggacatggag
ccctatacagtagcaggagtagccaagctggaaggttctgacgtccaccctgagaatcag
caggtcattcagcaaaatgaaccctcagagccagaggcaccatgcagttcacgctatagg
cttgtgggagtgctggtgcactcaggccaggccagtggaggtcactactactcttatatt
atccagaggaatggcagtggaagcgaaggtgaaaccaatcgctggtacaagtttgacgat
ggtgatgtcacagagtgcaagatggacgatgatgaagagatgaagaaccagtgctttggg
ggagaatacatgggtgaagtgtttgaccacatgatgaagcgcatgtcgtaccgtagacag
aagcgctggtggaacgcatacatcctcttctatgagcgcatggactccctggacaaagac
ggtgagctggtgaagtacatctctgagctgtcagtaagcagcaagccaaaccagatcaag
atgccaccagccatcgaatgcagcgtacgcaagcagaatgtgcagttcatgcacagccgt
atgcagtacagcctggaatactttcagttcattaagaaactcctaacctgtaatagcgtc
tatctgaacccaccaccaggacaagaccatcttttgcctgaagcagaagaaatggctaag
attagcattcagctcacagctcgattcctcttcagcacaggatttcataccaagaaagca
gtccgtggcccggccagtgattggtatgatgccctgtgcatcctccttcgacacagcaag
aatgtacgctgctggtttgcacacaacgccctattttcctacccaaaccgattctcggag
tacctgctcgagtgccctagtgctgaggtgcggggtgctttctccaagctcattgtattt
attgcacatttctctctgcatgatggaccttacccatcacctgttgcctcaccaggacca
tctagccagggctgtgataatctgagcttaagtgaccacttgttacgtgctgtgcttaac
ctgttacggagagaggtgtccgagcatggccgtcacctgcagcagtacttcaaccttttt
gtcatgtacgcaaacctaggtttggcagagaagacacagctgttgaaacttggtgtgcca
tccacctttatgctggtggctctggatgagggcccaggcccacccattaagtaccagtat
gctgagttggggaagctgtatacagtggtgtctcagctggtgcgttgctgtgacgtaacg
tctcgtatgcagtcttcaatcaacggtaaccctcctcttgctaacccgtatggggatccc
agcctgactcaacccatcatgcctctgcatcagatggtggctgagatactgtttgtgcgt
accagttacgtgaagaagatcattgaggattgcagtaactctgaggagaccatcaaactg
ttgcgcttctgctgctgggaaaacccacagttctcctccactgtgctcagtgaactgctg
tggcaggttgcttactcctacacatatgagctaaggccttacctggacttgctgctacag
atcttgcttgtggaagactcttggcaaactcacaggatccacaatgtgctcaaggggatc
ccagacgatcgtgacggcctgtttgacaccatacagcgttctaaaaatcactaccagaag
agagcttaccagtgcatcaagtgcatggtggcactgttcagcaattgctcagtcgcctat
cagatccttcagagtaatggagacctgaagagaaagtggacatgggctgtagagtggctt
ggtgatgagttagagcgcaggccatataccggcaatgcccagtacacatataacaactgg
tcacctcctgttcagagcaatgagacctccaatggctacttcctggagcgttcccacagt
gcccgcatgactttagccaaggcttgtgagctgtgcccagaggagtgtcacttaacgaag
cacgaggtggtgtctgaagaggacgcaggccggaagctgtcctcgccacagcagcttttg
ccaggggaagtgacaggccaacagcaacacactgagcaggatgagcaggaagcccctgat
gaccaggactcctctccaccagaagacacgtctctgtatccccactctccagggacacag
tatcaacagcaaaacaaccttccccacggtcagccatacactggccctgcagcacagcat
atgaacaatcctcagcgtccaggtccacgagcacaagaaaactgggagcccccagaagag
gtgccacctgcccagacaaaagagtag
DBGET
integrated database retrieval system
