Tachysurus vachellii: 132850189
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Entry
132850189 CDS
T09596
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
tvc
Tachysurus vachellii
Pathway
tvc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132850189 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132850189 (lmo7a)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132850189 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
PDZ_6
PDZ
LIM
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
132850189
NCBI-ProteinID:
XP_060732422
LinkDB
All DBs
Position
8:complement(14660651..14693490)
Genome browser
AA seq
1378 aa
AA seq
DB search
MINFSQSFGHQRKTCMCRKSDWALSVGPGTERSRASARRSLAHPQRTPNVIPTTQPLMLT
QDTFGAQRFQLPDFWPRPDPTSGPRLIRCKRHPLLGREHPNDPYNVSEDILPDLENDDMF
SRRTCAFYSNTELAKMKYGGILSLHHRSEPCIRLVTQHSDVKSKYPDIEKDDVATRRLQH
QCKQRPLSGAPDIYHPVPIPDLWVQQQKLQAKISPPVQVASPMYPKQKGTEHQKSDDMVV
RKLGIAHVQNPTEVSQRSLGTQTGPSVPSVCNEEDLQKWQAIREASRLRYKKKLMVERLL
QKNSDSDGAKSLSDIQVEQALQQVQYEDLQKVRAKVKENEDRWQDDLTKWKNRRKSVNLD
IMKKKEEREQIEILTSGSGTRKSRTFKEMEEERESREPGYRSRFASLSTSDDQDVFEEPT
HKTRVLPSRSNTVDNPYSLRRSKVRSLPSLLDDEPKTGSMPTDEADAPSGPVQSSSGSSL
LDDPVPISVISKPRLLEPTSNTQSTRTSTIISSPKLEAKSSSKPITESNISAKPTPAPRQ
GQSQASLYKPVSTEMKQPIAPQVSASLPRSYQRSDSARITSVVTPRPFGASATKVASLPR
AYTVGDSQKYFNGETKSSRHTTINSQTSSVQSSNENEGQEEEQVVPPTQTSSAVTPVSRV
APQPKVFPVNSTQQESYNEMRISLNQKPNSSNDFGFQTNWDSTGAVVKSIKQDSPAELCH
LQVGDKILAVNGQKVADMSYEQWKRSMDEALKDGSLFMDIRRQGKNNWGKDLPSLPFKRH
KVINLTSTDPLGSPEPYANMSLDFTSRRGMDPNVKPLNVSSQPVNRLPSTGINGGINEEP
VLLRNEEPISLKNLKRRSEFFEQGGSENQITDLPVPSHSASSTRWSWDPEEERRRQEKWQ
KEQDRQLQEKYQRDQEKLKEEFEKAQQEAVTEGTKQYQEDLRSLEMEREASRLKEEEEKR
RREEERKRREEQVRLEEERKRREQQERLVEERKRREQQERVEEERKRREQEEQLEEERKR
REEQKKREEQKRLEEKRQKEEEELKQREEEKKRREQEALRLQRKREEEEERRRQEAQQRL
QANDVEYTFPELSYSHRAKSKSTPELDDIEKNDIKGVYSKHRGLAGWLLEEELRRKKDPH
ILRQQAASELELERRNLLSAMRYSNPERAVSSGLGESTLNKAYQNRKEPVSQAEVERQQI
IQDMKKKTSLLPDNKWIRQSSVNNVNKQPAYIPLRRGESLDNLDVTKNHQSWRSSWTPET
TSSIPDYSRPYSSLSSSRPLLPQSTSSASTKTENQPSSRNRSVSGRKTCTFCDMPLGKGA
AMIIESLGLCFHLQCFKCCQCKADLGGSESGAEVRIRNKQLFCNSCYMRLKTGQPTAM
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgataaatttctcccaaagttttggacaccagaggaagacatgcatgtgcagaaaatca
gactgggctctcagcgtcggccctggtacagaaagatccagggcttcagccagaagaagt
ctggctcatcctcagaggactccgaatgtgattccgaccacacagccactcatgctcact
caagacacctttggagcccaaagatttcagctccctgatttttggcccaggccggacccc
acttcaggcccaagactcattaggtgcaagagacacccactattagggcgagaacaccct
aatgacccatacaatgtatctgaggacattctccctgacttggaaaatgatgacatgttt
agccgccgcacatgtgccttctactctaacactgagctggccaagatgaaatatgggggt
atactttccttacatcacaggtctgagccatgtatcagattggtcactcagcatagtgat
gtcaaatctaagtacccggacattgagaaagacgatgtggccactcgcaggttacagcat
cagtgtaaacagcgccccctttcaggagcacctgatatctatcaccctgtgcctattcct
gacctctgggtacagcaacagaaactgcaggccaaaatatcccccccagtacaggtggct
tccccgatgtatccaaaacagaaggggaccgaacatcaaaaatcagatgatatggtagtt
aggaagcttggaattgcacatgtccagaatcccactgaggtatctcagaggtcacttgga
actcaaacaggcccgagtgtaccttcagtctgcaacgaggaagatctccaaaaatggcaa
gccatcagagaggccagtcgcctaagatataagaagaagctgatggttgagagactgttg
caaaagaactcagatagtgatggggctaaatcactgagtgacatccaagttgagcaggca
ttacaacaggttcagtacgaagatctgcaaaaggtccgtgccaaggtgaaggagaatgaa
gacaggtggcaggatgatctgacgaaatggaaaaacaggcgcaagagtgttaacttagat
atcatgaagaaaaaagaagagagagagcagatcgagatacttacttcagggagcggcacc
aggaaatcaaggacgttcaaggaaatggaagaggagagggaaagccgagagccaggctac
aggagtcgcttcgcttccttgtccacatctgatgaccaagatgtctttgaagaacccaca
cacaagaccagggttttaccaagccgcagcaatactgtggataatccctactccctgaga
cgatctaaagtgcgctctcttcccagtttgctagacgatgaacctaagactggcagcatg
ccaacagatgaggcagatgcgccatccggtcctgtccagtccagctcagggagcagcctt
ctggatgatccggttccaatcagcgtcattagcaaacccaggctactagagcccaccagc
aacactcaatcaactcgcaccagcactatcatcagcagcccaaaactagaggctaaaagc
agctcaaaaccaattacagaatccaacatctctgctaaacctacccctgcacctaggcaa
ggccaaagtcaggcatccttgtataaaccagtttcaacagaaatgaagcaacccattgca
cctcaggtttctgcttcacttccgaggagctaccagagatcagatagtgcacgcatcact
tctgttgtcactcccagaccatttggtgcctcagctaccaaagttgcatccctgccccgt
gcctatacggtaggtgactctcagaagtactttaatggtgagacaaagagtagtaggcat
actacaattaattcccagaccagttccgtacaaagcagtaatgagaatgaagggcaagaa
gaggagcaagtggttccccctacacagacctcctcagctgtcaccccggtcagccgtgta
gctccacaacccaaagtgtttcctgtcaacagtacacagcaggaaagctacaatgaaatg
aggatcagcctgaaccaaaaacccaacagcagtaatgactttggcttccagactaactgg
gactccacaggagccgttgttaaatctataaaacaagacagtccagcagagctgtgccac
ctgcaggtcggggataagattttggcagtgaatgggcagaaggtggcagacatgagctat
gaacagtggaaaaggagcatggatgaagccctgaaggatggtagcctgtttatggacatt
cgcagacagggaaagaacaactggggcaaagacctaccttcccttccatttaaaagacat
aaggtcatcaatctcaccagtacggatcctctaggttcccctgagccatatgccaacatg
agcctggacttcacctcacgccgaggcatggatcccaatgtgaaacctctgaatgtcagc
tcccagcctgtcaatcgtctgccatccactggcattaatggtggaattaatgaggaacct
gtgcttctgagaaacgaagaacccatttctttaaaaaaccttaaaaggagatcggagttt
tttgaacaaggtggatctgaaaatcagatcacagacctaccagttccctctcactcagcc
tcctctactcgctggtcctgggacccagaggaagagcgcaggcgacaggaaaagtggcaa
aaagagcaggatcgccagctccaggaaaagtatcaacgcgatcaagaaaagctaaaggag
gagtttgaaaaagcccagcaggaggctgtaacagaaggcacaaaacaatatcaagaggat
ctgaggagccttgagatggaacgcgaggcctcaagactcaaagaggaagaggagaagagg
aggagagaggaggagaggaagagaagggaggaacaggtgcgccttgaggaggagaggaaa
agaagggagcaacaggagcgccttgtggaggagaggaaaagaagggagcaacaggagcgt
gttgaggaggagaggaaaagaagagagcaagaggagcaacttgaggaggagaggaaaaga
agagaagagcagaaaaagagggaagaacagaaacgtctggaagaaaagagacagaaggaa
gaagaggagcttaaacaaagggaggaggaaaagaaaagaagagagcaagaggcactaaga
ctgcagaggaaaagagaagaagaggaggagaggaggcgccaagaagcccagcagagactt
caggcaaatgatgtggagtatactttccctgagctatcctactcacacagggccaagtcc
aaatctactccagagctggatgacatagaaaaaaatgatattaaaggtgtgtatagcaag
cacaggggtctggcaggttggcttctggaggaagagttaagaaggaagaaagatcctcat
atcctgagacagcaagctgcatctgagctggaactagagaggagaaacctccttagtgct
atgagatacagtaacccagagagagctgtaagcagtggtctgggtgagagcactttgaat
aaggcctaccagaataggaaagagccggtatctcaggctgaagtagaaaggcagcagatc
attcaggacatgaaaaagaagacttcattgctgccagacaacaaatggatcagacaaagt
agtgtcaacaatgtgaacaaacagccagcctacattcccttgaggaggggtgagtctctg
gacaacctggatgtgacaaagaatcaccaatcctggaggtcatcatggactccggagacc
acttcctccatcccagactatagccgtccttattcatctctgagttccagtaggccattg
ttgccccagtccacatctagcgcctccacaaaaactgagaatcagccatcctcacgaaac
aggtcagtcagtggcaggaaaacgtgtactttctgtgatatgccacttggcaaaggagca
gcaatgatcatcgagtccctggggctctgttttcatttacaatgctttaagtgctgtcaa
tgtaaagctgaccttggtggctcagaaagtggagctgaagtcaggatacgaaacaaacag
cttttctgtaactcctgctatatgcgtctcaaaacagggcagcctacagccatgtga
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