KEGG   Tachysurus vachellii: 132850196
Entry
132850196         CDS       T09596                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
tvc  Tachysurus vachellii
Pathway
tvc04145  Phagosome
tvc04148  Efferocytosis
tvc04510  Focal adhesion
tvc04512  ECM-receptor interaction
tvc04810  Regulation of actin cytoskeleton
tvc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132850196 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132850196 (itgb5)
   04148 Efferocytosis
    132850196 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132850196 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132850196 (itgb5)
   04810 Regulation of actin cytoskeleton
    132850196 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvc04131]
    132850196 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tvc04515]
    132850196 (itgb5)
Membrane trafficking [BR:tvc04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    132850196 (itgb5)
Cell adhesion molecules [BR:tvc04515]
 Integrins
  Integrin beta subunits
   132850196 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin EGF_TEN
Other DBs
NCBI-GeneID: 132850196
NCBI-ProteinID: XP_060732441
LinkDB
Position
8:14823762..14865441
AA seq 804 aa
MWSFQLCFHLALLLAGIILHICTHTARGLNVCVSGSATSCEECLLLHPSCAWCAQENFGR
GRTFMSQCDLSQNLLKKGCKAHYIENPRSISSILKNKPLSSKGLISTGYDVIQIQPQKIS
LSLRPGHQTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMKKLTSNF
RLAFGTFVDKNLSPFSYTAPKYKENPCNGYKPFPNCVPSFGFRNHLSLTDKVDRFNEEVQ
KQVVSRNRDAPEGGFDAILQAAVCKERIGWRKEAYHLLVFATDDVPHLALDGRLAGLVQP
HDGQCHLNDENEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNFTALIPGT
TVEILDQSSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDGKPLSGLSKCAD
LKIGDTVSFNISVAAHSCPPPGTTKSFTIKPVGFKDSLEVSVDYQCDCTCTRFSQANSNH
CSNAGTYTCGTCHCDPGYHGTNCECSEDEVGSLNLAACREAKGKQVCSGRGECSCNYCRC
YESEFGKIYGKFCECDDFSCARHKGILCSGHGDCHCGECKCHAGYIGDNCNCSIETTGCF
SEDGRMCSGRGSCVCGRCQCTEPGAFGDLCEKCPTCGDACAAKRDCIECTLFNTGKFADN
HTCQRMCKDKIIVTETLDTEDPGTVLCLYKTENECVMKFTYSEHTSGQSILTALHEPVCA
ASPDAMTVLLAVVGSILLVGIVLLAMWKLVITIHDRREFARFQSARSRARYEMASNPLYK
HPISTHSVETAFQMYSKSYNGGIH
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtggagttttcagctttgtttccacctcgcacttctgttagccgggattattctgcac
atctgtactcacacagccagaggtcttaatgtgtgtgttagtggcagtgcaacatcgtgt
gaagaatgtcttctgctccacccgagctgcgcctggtgcgctcaagagaattttggaagg
ggaaggacatttatgtcgcaatgtgatttgagccagaacttgctgaaaaagggctgcaag
gctcattatatcgaaaacccaaggagtatcagttctatcctcaagaacaaacccttgagc
tccaaaggcttaatttctaccgggtatgacgtcatccagatccagccacagaagatttca
ctcagtctaaggccgggtcatcagacatcttttgaggtgcaggttcgccctgttgaggat
tatcctgttgatctgtactacttgatggacctttcactatctatgaaggatgacctggat
accattcgcaatctgggaacaaaactagctgaagagatgaagaagctcactagtaacttc
cgtcttgcatttgggacgtttgtggataagaacttgtctcctttttcatacactgctccc
aagtataaggagaacccctgcaacggatacaagccattcccaaactgtgtcccttccttt
gggttccgcaatcacttatctctgactgacaaagtggaccgtttcaatgaggaggtgcag
aagcaggtggtgtcaaggaacagggacgcgcctgagggtggatttgatgctattctacag
gctgctgtctgcaaggagagaattggttggaggaaagaggcctatcacttgctggtcttt
gctacagatgacgtacctcacctggctttggatggcagactggcaggcctcgttcagcct
cacgatggacagtgccacctgaatgatgaaaatgagtacagtgcttcaaccaagatggac
tatccatcattagctctccttggggagaagctggctgaaaacaatattttccttattttt
gcggtgaccaaaagacattatgttctttataagaacttcactgcattgataccaggaact
acagtggagattcttgaccaaagctcaaaaaatataatccagctgattgtcaatgcatat
aataacatccgctctaaggtggagctgagtgtatgggatcatcctgaggacctcagcctg
gccttcactgccacatgtcaggatggcaagccgctttcaggcctgagcaaatgtgctgac
ttaaaaattggagacacggtttcctttaacataagcgtggctgctcatagctgtcctcct
ccaggcaccacgaaaagtttcaccattaaaccagtgggatttaaagatagtctggaagtc
tctgtggattatcagtgtgattgcacatgcacacgcttctctcaggccaacagcaaccac
tgcagtaatgcgggtacctacacgtgcggtacatgccactgtgacccaggctatcatggc
accaactgtgagtgctcggaagatgaagtaggcagcctgaacctggccgcctgtcgtgaa
gctaaaggcaaacaggtgtgcagtgggcgtggggaatgtagctgtaactactgccggtgc
tatgagtccgagtttggcaaaatctacggcaagttctgcgagtgtgatgacttttcctgc
gctcgccataagggcatcctgtgttcaggtcatggtgattgtcactgtggggagtgtaag
tgccatgctggctacattggagacaactgtaactgctcaatagaaacaactggatgtttc
tcagaagatggcaggatgtgtagcggacggggcagctgtgtatgtggccgctgccagtgc
accgagccaggggcatttggggacttgtgtgagaaatgccccacttgtggtgatgcctgt
gctgcaaagagagactgtatcgagtgcaccctcttcaacacagggaaatttgcagacaac
cacacctgccagcgcatgtgcaaggataagatcattgtcacagagactctcgatacagag
gacccaggcactgtactgtgtttgtataagacagagaatgaatgtgtgatgaagttcacc
tactctgaacataccagtggccagtcaatcctcactgctctgcatgagccagtgtgtgct
gcttcccctgatgctatgactgtgctgcttgcggttgtgggcagtatcctgctggtgggc
attgtgctgttggccatgtggaagttagtcatcaccatccatgaccgccgcgagtttgct
cgcttccaaagcgcacgatcgcgggcacgctatgagatggcctcaaatcccctctacaaa
cacccaatatccactcactcagtggagacggcattccagatgtacagcaagtcatataat
ggaggaattcactga

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