KEGG   Tachysurus vachellii: 132850198
Entry
132850198         CDS       T09596                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tvc03032]
    132850198 (rif1)
DNA replication proteins [BR:tvc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    132850198 (rif1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 132850198
NCBI-ProteinID: XP_060732468
LinkDB
Position
8:14883661..14898498
AA seq 2467 aa
MMATVPMSSSSLLPLLGTLEDIAAGVSEQTDAYLTIANRLSGEDGRQFFPLIVKHFSRLG
KAFQTHISSENEELRQAALQALGFCVFSTHIVSGIPANFAEEILLTLCALVLKSTDKNTC
TRALWVISKQNFSAEVVAKKTPEILKTLEALQTKDIQSVLTDHESLNVVIKLLEQAPVQM
GEGAVLWIKLIVPLVVHSASKVRLRAAAALEMGMPLLLQKQQEVAAIVEPMMSSKLIPEM
QKLFSTKNESNVLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRSSSPSIKKIAFLAW
KSLIDNFALNPDILCSSKRLKLLMQPLSSILVRTEALLLTKLEVWWYLVVKLGPNLSANF
EQVGVPLLLSTLPPDASSVSPATPARNTSHSNGIGLVTPKPGGPSCSSPGASSHLSLNSS
VSTPLSYASIQLLGLEMLLHYFLGSQASAAAAKNNLQLSLEPLTHNLLTSHSFFSKHSST
LISAVRDGFISVGKDAPEALLRLIWTSLVGHVNTTIEAAGNKKERQGSEVLTLLLQALQS
IVSSEALPAPRALALLEATVKAIPQKVLGSAAYQVANMDVLNGTPALFLILLFYKSSMLS
SFVTYEGFFVCLETLVTCGLCGPTSPLAFGESVLGTVSGSVESVENKEHLWRMWSVVVNP
LTDTITQTNEVNQGDALEHNFSAIHSALMFPITHLLPGSGLPQMTQKTMLSTWSRLYKAF
ARCSALVATAEENVCCEELCARISSALDSEALKNLSTLDAVANILMSIIENVDFSPFTPQ
FQQKMKSPHTPLRWVRKRNKALGNLSTFHALFVQSLEVFITLASSEANSTVLSGIGAMLF
SIVSILFTNISLPTVIQESLASLTKPLALLYGPVISSEGQQSKTHTMLAFKLEKLVGDVF
GILQTRSAVQYNDELLEILSPLLCVLFQNKSKHIRSVMTQFWNGTFGNALVLTYPDSLRP
VLNQAKQKSPLILPGFRAVENSEDFSGQCSQSECSQLDTKISGMMVTSVGKRESLLTRAA
ELQQRSSGTPSKPVSVKLDFGSPKPPHKEVLEEEASVDFVFIPPEAKERVLTEHQKEVKR
TKRVDIPAMYNNLDASLDTTVFTQYTQSQEESMDKLPTQEQAEAKEIDMTEAKDLKDKAS
YVIDDQKVQDNINPDLAAQEKATIYRKENQTTEVLFSLDVTASDAGVHQDSESQSPNVSS
SSDMISGTPPKPSSRRQSFITLEKYGEDRPTNSASVTKFTGPLSRTSFSQEPQKSQIDSN
LPSPSYSQPETGKEVSKESAANITEDSTNKSDGLEIEAELSSVATCPSEGTEDDVIPDTQ
NPELTEVADPDKSLDKSSVEVNTEIASPGRKSEVFVASQDSSPVEPRRSGRRRSRPVLPG
EVSDQDSKGKKKLSVNASALNDAQKPAPVKNNLPTRTRRSRVHEENKSESVKLQNLEQKD
ERRDSLVPSLAITNSSRGRKSRSKAITQTEQSPLSSSDDKEESPLNQSHSQSHGRPVRRT
RLSNANADVSDKTHRVENSQEDSPVSVSKHMDSSASDADSQSPARPRRARRSEAAEAQNK
EKPGLRNEQVCDPGHAQTPTTTKVKSGRRKKANEENSECSQVNDLSELQDNSQGRGKYRT
RRSSQALLASGENSESDASDTRDGQKPKRARGYKSPEITPSAVINENAHVDVLGKEDEGS
ISVPMEVPKNDPEACLVVGPLMDILNIIESADKVEAPVAEIQANEHYTSDVKSADDEQQS
DSKIQMDSDKEESVNTVLEERTVVNEALPSSQNSLQSDSKKQMDSDKEESVNTVLEERTV
VNEALPSSQNSLQSDSKKQMDSDKEESVNTVLEERTVVNEALPSSQNSLQLAQNVEVKSL
KPRKCPHSKRSRWRRQSTNCKCLQAGSTPSKEECSNSQDVQNITENMVQLESSSLPPEAV
LNSITSVLPEKESVVLQDNCPTVANAQSSSSSLPIFTEAEVPAVSLVEKPNESISQSSDV
IDAREAEECSKDTIDDAENKHEETEQDKNVSKDKSTQEQPEEDPGAPEVSPSPSQSVEDK
PMYQEQSESPVSQEEIVHSGEETEMPEKEELVPELEGAITALPEGTELDRFPQEEGDDGE
ATQIDNDLQPETALHCEASVPLQTALSEACLDSPPKEKSSDSLCGNTEVRQSPSNSVTRG
VWSPSASPSTSILKKGLKRQCEEDTPSPLIKSRRVSFANPIYQQELADDIDRRSPVIRTS
SPKSKAVGQPKYITTPTKGLLSLSPRNLRTPGYKSSKKCLISEMSQEPRPIPKDCVYPAL
VCCSTPVEAVLPQISSAMWPRGFGQLVRARNIKTVGDLSALSPNEIKLLPIRSPKVSNLK
KALKTYYEQQRKGRPDDLKSFDVMEKMTSEPEETPAAPNEEDQMSGDGQEILSSEMPSTV
EQKQEEPMPVDLLSDVAALGSRLTHDELSRCSPMELGLMHEQLSGMMRSIVDHLQSRLVS
NLEDSLS
NT seq 7404 nt   +upstreamnt  +downstreamnt
atgatggccacggtccccatgtccagttccagcctcctccctctccttggaactctggag
gacatcgcagccggggtgtccgagcagactgatgcctaccttaccattgccaatcgcctc
agtggagaagatggaaggcagttctttcctctaatcgttaagcacttttcacgcctgggt
aaagcttttcagactcacatatccagtgaaaatgaggagctaagacaggctgcgcttcag
gccctgggtttctgtgtattcagcacacacattgtctcgggcattcctgcaaattttgca
gaggagatcttgttgaccctttgtgccctggtgttaaagtccacagacaagaacacctgc
acacgagcattatgggtcatttcaaaacagaacttttctgcagaggttgttgctaagaag
acaccagaaatactcaagactcttgaggctctgcagacaaaagacatccagtcagtgctg
accgatcacgagtcgctaaatgttgttataaagctgcttgaacaggctccagttcagatg
ggtgaaggagcagttttgtggattaagctgattgtacctctggtagttcactcagcctct
aaggtgcggttacgtgcagctgcagcactagaaatgggaatgccccttcttctgcagaaa
cagcaggaggtggctgccattgtagagcctatgatgtcttctaaacttatccctgaaatg
cagaaactgttctccaccaagaatgagagcaatgtgctaaagctctggcctttatttgta
aagcttctaggcaagttgctccataaaggaggtgccttcataaattcgctgctttattta
gaagagctgggcttccgcagctcctctccgagcattaagaaaattgccttcctagcctgg
aaaagcctcattgacaactttgcccttaatccagatattctctgtagcagcaagcgacta
aaactacttatgcagcctctcagctccatccttgtgaggactgaagccttgctgctcacc
aaattagaagtctggtggtatctggtggtcaaactagggcctaacttgtctgctaacttt
gaacaagttggtgtaccactgctgcttagcacacttcctccagatgcctcatcggtgtct
ccagccactcctgctagaaacacaagccatagcaatggcattggattagttactcctaaa
ccaggtggtccctcgtgtagtagtccaggtgctagctctcatctgagcttgaacagcagt
gtaagcacacccctgtcctatgcctcaatccagctgctgggactggagatgcttttgcac
tactttctcggctcacaggccagcgctgctgcagccaagaacaatctacagctcagtctt
gagcctttgactcacaaccttctcaccagtcactcgttcttcagcaagcactcctccaca
ctcatttcagctgttagagatggcttcatctctgtgggcaaagatgctccagaagcattg
ctgagactgatttggactagccttgttggccatgttaatacaacaatagaagctgctggt
aataagaaggagaggcagggttctgaagtactcactctactgctacaggccctgcagtct
attgtgtcttctgaagccctgccagccccacgggctctggctttgttggaagctactgtg
aaagccatacctcagaaggtactaggatctgcagcatatcaagtggctaacatggatgta
ttgaatggtaccccagcgcttttcttgattcttctcttctacaagagcagtatgctctct
tcgtttgtgacttacgaagggttctttgtgtgcttggagacccttgtcacttgtggtctc
tgtgggcccacatcccccctggcctttggagaatctgttttggggaccgtgagtggcagt
gtggagtctgtggaaaacaaagagcatttgtggagaatgtggagtgtagttgtgaaccct
ttaactgataccattacacagacaaatgaggtaaatcaaggagatgccctggagcataat
ttcagtgcaattcatagtgccttgatgtttcctattactcaccttttgcctggctcaggt
cttccacagatgactcagaagaccatgttgagcacttggtctcgactgtacaaggcgttt
gctcgctgctctgctctcgtggccacagctgaagagaacgtgtgctgtgaagagttgtgt
gccaggatatcttctgcactggatagtgaagccctgaagaatttgtccactcttgatgca
gtagcaaatatcttgatgtccattattgaaaatgtggacttctctccatttacccctcag
tttcagcagaaaatgaaatcccctcacaccccgctacgctgggttcggaagaggaacaaa
gctctggggaatctctcaacctttcatgcgctctttgtgcagtctttagaagttttcata
actttggcctcttcagaggcaaacagtacagttttaagtggcattggtgcaatgctcttc
tccattgtctcgattcttttcaccaacatttcactgcccactgttattcaagagtcattg
gcttccctcacaaaacctcttgcgcttctttatggtccagttataagttcagaaggtcaa
cagtcaaagacccacactatgctagcattcaagttggaaaagctggtaggagatgtgttt
ggcatcctgcaaacacgttcggcagtgcagtataatgatgagctgctggagattttgtct
cctttgctctgtgtacttttccaaaacaagagcaaacacatccgctctgtcatgactcag
ttctggaatggcacttttggaaacgctcttgtgctgacgtaccctgacagtctcaggcct
gttttaaatcaagctaagcagaagtctcccttaatattacctggctttcgagcagttgaa
aactcggaggatttcagcggacagtgctcacagagtgaatgttctcaacttgacaccaaa
atcagtgggatgatggtgacctcagtaggaaagagagaatccttactgactagggcagca
gagctacagcagaggagttctggaacaccttccaagcctgtatctgtgaaattggatttc
gggtctccgaagccaccacacaaagaagttcttgaggaggaggcatcagtagattttgtc
tttattccacctgaggcaaaggagagagtacttactgaacatcagaaggaggtcaaaaga
actaaaagggttgacatccctgctatgtacaataatttggatgcctctttggatactaca
gtctttacacagtacacacagagtcaagaggagtccatggacaaactgccaacacaggaa
caagctgaggccaaagaaattgatatgactgaagcgaaggatttaaaggacaaagcatca
tatgtaattgatgatcagaaagtgcaagataacatcaatccagaccttgctgcacaagaa
aaagcaacaatttaccgaaaagaaaaccaaactaccgaagtgctgttttctctggatgtc
accgcttcagatgctggtgtacatcaggattctgagagccaaagcccaaatgtgtccagt
tcttctgacatgatctctggtactccaccaaagcctagcagtcgacgtcagtccttcata
accctagagaaatatggagaggataggccaactaattctgcaagtgttacaaaatttact
ggcccactctctaggacttcttttagtcaggagccacaaaagtcacaaattgactcaaac
ctgccttcaccttcttactcacagccagaaactggtaaagaggtatctaaggaatctgct
gctaatattaccgaggattctactaataagtctgatggactggagatagaggcagagtta
agctcggtagctacatgtccaagtgaaggcacagaagatgatgtgatcccagacacccaa
aacccagagctgactgaggtagctgatcctgacaagtccttagacaaatccagtgtcgag
gtgaatacggaaattgcctcccctggaagaaaatctgaagtttttgttgcttctcaggat
tcaagtccagttgaaccaaggaggtccggtagacgcagaagtaggcctgttctgccaggg
gaagtgtctgatcaggactcaaaaggcaagaaaaagctttctgttaatgcatcagctttg
aatgatgcacagaaacctgcacctgtcaagaacaatttgcctacaagaaccagaagaagt
cgagtccatgaagagaacaagagcgaaagtgtcaaactgcaaaacctcgaacaaaaagat
gaacggagagattcactggtaccatctctggctatcacaaactcatcacggggaagaaaa
agtaggagtaaagctattacccagactgagcagtctcctttaagttcatcagatgataag
gaggagtctcctcttaatcagtcacatagtcagtcacatggtaggcctgtaaggcggacc
agattaagcaatgctaatgcagacgtttcggacaaaacacacagagttgagaactctcag
gaggactctccagttagtgtatccaaacacatggatagttctgcatctgatgctgatagc
cagtcacctgccagaccaagaagagcaagaaggtctgaagcagctgaagcacaaaacaaa
gagaagcctgggcttagaaatgaacaagtttgtgatccaggtcatgctcagacaccaaca
accacaaaagtcaaatcgggtaggcggaagaaggctaatgaagagaattctgaatgctca
caggttaatgacctcagtgagctacaggacaattctcaagggcgtggcaaatatagaact
cgtcggtcatctcaagccttgttagcatctggtgagaactctgagtcagatgcgtctgat
acccgtgacggacaaaaacctaaaagagctagagggtataaatcacctgaaataacccca
agcgcagtgattaatgaaaatgctcatgtggatgtgttgggcaaggaagatgaaggtagc
atttcagttccaatggaggtgcctaaaaatgatccagaagcctgtttagttgttggtcca
ctgatggatatcttgaatatcattgaatctgctgacaaagttgaagcccctgtagctgaa
atccaagcaaatgaacattacacttctgatgtaaaatcagctgatgatgagcaacaaagt
gactctaaaattcaaatggattccgataaagaggagtctgttaacactgttctggaagag
aggaccgttgtgaacgaagcccttccatcttcacagaacagcctacaaagtgactctaaa
aagcaaatggattccgataaagaggagtctgttaacacggttctggaagagaggaccgtt
gtgaacgaagcccttccatcttcacagaacagcctacaaagtgactctaaaaagcaaatg
gattccgataaagaggagtctgttaacactgttctggaagagaggaccgttgtgaacgaa
gctcttccatcttcacagaacagcctacagctagctcaaaacgttgaggtcaagtctctg
aaaccccgtaaatgtcctcatagcaaaagaagtcgttggcgcagacagtccactaactgt
aaatgcctccaagctggcagcacaccttcaaaagaagaatgcagtaattcacaagatgta
cagaatatcactgaaaacatggttcaacttgaatcaagcagcctgccacctgaagcagtg
ttgaacagtattacatctgtcttaccggaaaaagagagtgtggtacttcaagataattgt
cctactgtcgctaatgcacaatcttcttcttcatctttgcccatctttactgaagcagag
gtgcctgctgtaagcctagtggaaaagccaaatgaaagcatttcccagtcctctgatgtg
attgatgcaagagaggcagaggaatgcagcaaagacaccatagatgacgcagagaataaa
catgaggaaactgaacaagataaaaatgtttcaaaagataagtctacccaggaacaacca
gaggaagatccaggtgcaccagaggtctctcccagccctagccaatctgttgaggataaa
ccaatgtaccaggaacagtctgagtctcctgtcagtcaggaggaaattgttcacagcgga
gaagaaactgagatgccagaaaaggaggaacttgtgcctgagctggaaggtgcaattact
gcactcccagagggcactgaactagaccggttcccacaggaagagggagatgatggtgaa
gcaacacaaatagataatgatcttcaacctgagactgcgctacactgtgaagcatctgta
cctctgcaaactgccttatcggaagcatgcttggactctccaccaaaagagaagtcttca
gattcgctctgtggaaacacagaagtgaggcagagtcccagtaatagtgtaacacgtggt
gtatggtcaccatcagcttctccatctacaagcattctgaagaaagggctgaagaggcaa
tgtgaggaagatactccatcacctctcatcaagtctcgcagagtgtccttcgcaaatccg
atataccagcaggaactcgctgatgatattgaccgccgcagtccagtaatacgaaccagc
tctccaaaatcaaaagcagttggacagcctaagtatattacaacgcctacaaaaggcctg
ttgtcccttagccctcgcaaccttcgcactcccggttacaagagttcaaagaaatgcctg
atctcagaaatgagccaggagccccgacctattccaaaggattgtgtttatcctgctctt
gtctgctgttcgactcctgtggaggccgttctgccccagatttcttctgcaatgtggcct
cggggctttggtcagcttgtgcgtgctagaaatattaaaacggttggagatctgagcgct
ctttccccaaacgaaatcaagttgctgcctattcgctcaccgaaagtgtcaaatctcaaa
aaagcactgaaaacctattatgagcagcagcgcaaagggcggccagatgacctgaaaagc
tttgatgtgatggagaaaatgacctctgagcctgaggagacacctgcagctccaaatgag
gaggaccagatgtctggagatggacaagaaatcctctcatcagaaatgccatctacagta
gagcagaaacaagaagaaccaatgcctgtggatctgctatcagatgttgctgctctggga
tctcgtctcacccacgacgagctcagtcgttgttcaccaatggaactgggtctgatgcat
gaacaactcagtggcatgatgaggagtattgtggatcatcttcagtcacgtttagtcagc
aaccttgaggacagtttgtcatga

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