KEGG   Tachysurus vachellii: 132850210
Entry
132850210         CDS       T09596                                 
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
tvc  Tachysurus vachellii
Pathway
tvc04382  Cornified envelope formation
tvc04510  Focal adhesion
tvc04512  ECM-receptor interaction
tvc04514  Cell adhesion molecule (CAM) interaction
tvc04518  Integrin signaling
tvc04810  Regulation of actin cytoskeleton
tvc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132850210 (itga6a)
   04514 Cell adhesion molecule (CAM) interaction
    132850210 (itga6a)
   04518 Integrin signaling
    132850210 (itga6a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132850210 (itga6a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132850210 (itga6a)
   04810 Regulation of actin cytoskeleton
    132850210 (itga6a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    132850210 (itga6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132850210 (itga6a)
   04515 Cell adhesion molecules [BR:tvc04515]
    132850210 (itga6a)
   04090 CD molecules [BR:tvc04090]
    132850210 (itga6a)
Exosome [BR:tvc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132850210 (itga6a)
  Exosomal proteins of breast milk
   132850210 (itga6a)
Cell adhesion molecules [BR:tvc04515]
 Integrins
  Integrin alpha subunits
   132850210 (itga6a)
CD molecules [BR:tvc04090]
 Proteins
  132850210 (itga6a)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha VERL_C DUF648
Other DBs
NCBI-GeneID: 132850210
NCBI-ProteinID: XP_060732500
LinkDB
Position
8:complement(15618991..15635565)
AA seq 1097 aa
MNSMEISGLGISLNLRKFLLLLLWTDACAFNLDTKNVLRKNGDPSSLFGFSLALHRQLQP
VDKRILLIGAPRAKALSNQGANITGGLYSCDITTHLDDCNRIEFDNDADLRVESKENQWM
GVTVQSQGPGGKIVTCAHRYQRRLFVNTPQESRDITGRCYVLSQDFSIDGQSDEDGGNWK
FCEGRARGHERFGACQQGVAATFTNDYHYVIFGAPGAYNWKGIVRVEQKNNTLLEMGYYD
DGPYEVGDESRLDPELVPVPANSYLGFSLDSGHNITEKGKLIVVSGAPRANHSGAVVLLR
KEGEVSTMLSPEYVLEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFQRDGEVGGAVY
VYLNKAGKWRSIVPTRLNGTKDSMFGLAVENIGDINLDSYEDIAVGAPYADAGSGRVYIY
HGSASGINTKPAQILEGKPHGMHMFGYSLAGNMDLDYNSYPDLAVGSLSDAVFVYRARPV
INIKKEIKVTPKEIDLTKKTCGNSICLNVEVCFTYKANPVTYSPKLTISYMLETESQRRK
QGLHSRVSFLDKKPTDQDFQSTGTLELKGQNRKSCHKVQLRLQENIKDKLRAIPIEMSCA
IVSAKRGKSPSSLPELVPVMDSKIPSKTSTEVNFLKEGCGSDNICQSNLQLQYRFCYRES
NQDIFPPLPMQNGIAVVSLSDQKDIALEVAVKNRNGDDAHEAKLMGWFGDSLSYSGFRSQ
KTTDKHVICAANQNGSQVDCELGNPFKRDSEITFYIILSTARISLQTTEVVVELQLETTS
LQGGLEKVRAKAKVVIELLLSVQGVAKPSQVYFGGNVRGESAMNSEEEVGSLIEYEFRVM
NLGKPLKSYGTASINIQWPKESAVGKWLLYLVKITSKGLEKITCSPENEINPNGLIEGST
FSRRKRHTEPSRISEETKRSLFTDNRKHKTLSCAVDAKCVDIKCPLQGLDSSAHIVLRSR
LWNTTFLEDYASYNYLDLIVKASISLDVSAKNIVLKNPETQVRLTIFPENTVAHYGGVPW
WIILVAVLAGILMLALLVLLLWKCGFFKRSKYDDSIPKYHAVRIRKETRHFTDESIMFDP
FEKKQWMTIWSENESYS
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgaatagcatggagatttctggactggggatttctctcaatttgcggaaatttctcctg
ttgctattatggaccgatgcatgcgcatttaacttggacacaaaaaacgtgttgaggaag
aacggtgatcccagtagcctctttggattctctcttgcactgcaccggcagctacaacca
gtggataagagaatacttcttattggagctcccagggctaaagctttatccaatcagggt
gcgaacatcactgggggtttgtacagctgtgacatcaccactcatttggatgactgcaat
cggattgagttcgacaatgatgctgatcttcgtgtggagagtaaagagaatcagtggatg
ggggtcactgtgcagagtcagggaccaggaggaaagattgtgacctgtgctcaccggtac
cagcgacgtctatttgtgaacacaccacaggagtctcgggatattactggccgctgctat
gtactcagtcaggattttagcattgatggccagtcagatgaagatggcggcaactggaaa
ttttgtgaaggtcgtgccaggggtcacgagaggtttggtgcctgtcagcaaggtgtggct
gcaacgttcaccaatgactatcattacgtcatttttggagcaccaggagcttataactgg
aaaggaattgtacgagtggagcagaaaaacaacactctcctggaaatgggctattatgat
gacggcccatatgaggtaggggatgaaagccgtttggatccagagctggtgcctgtacct
gctaacagttacttaggtttttctctggattctggccacaacattactgagaagggcaaa
ctgattgtggtgtctggagctccaagagccaatcacagtggagcagtggtgctgctgagg
aaagagggagaggtgtccacaatgctgtcgcctgagtatgtgctagaaggacctggactt
gcctcttcgtttggatatgacgttgcagttgtggatctcaatggagacggatggcaggac
attgtagtgggagctcctcagttcttccagagagatggtgaggtaggaggagcagtgtat
gtctacctcaacaaggccggaaagtggcgctccatcgtccccacccgtctcaatggaact
aaagactcaatgtttggactggcggtggagaatattggtgacattaatctggattcctat
gaagatattgcagttggtgctccttatgcagatgcaggttctggcagagtgtacatctat
catggatcagcttctggcattaacaccaaaccagctcagattctggaaggtaaacctcat
ggtatgcacatgtttggctattcattggctgggaacatggacttggactacaattcctac
ccagatcttgctgtaggatctctgtctgatgcagtgtttgtgtacagggccagacctgtc
atcaacataaagaaggaaatcaaggttacaccaaaggaaattgacctgacaaagaaaacg
tgtggaaacagtatttgtttaaatgttgaagtctgctttacctataaagcaaatcctgtg
acttacagccccaaactgaccatttcgtacatgcttgagacagaatcacaacgcaggaag
cagggtttgcactctagagtgtcgttcctggataaaaagccaacggatcaagacttccag
tctacaggcactttagagctgaaagggcaaaacaggaaaagttgtcacaaagtccaactc
cgactgcaggagaacatcaaagacaagctgagagctatccccatagagatgtcctgtgcc
attgtgagcgctaagagagggaaaagtccaagctcactaccagagttggtgcctgtgatg
gactccaaaataccaagcaagaccagcactgaggtgaacttcctaaaagaggggtgtgga
tctgacaacatatgccagagtaacctgcagctccaatacagattctgttacagagaatcc
aaccaggacatatttcctccattaccaatgcagaatggtattgctgtggtgtctctgagt
gaccaaaaggacattgctctggaggtagcagtgaagaataggaatggagatgatgctcat
gaagccaaactaatgggatggtttggtgattcgctttcatactctggattcaggtctcag
aaaactacagacaagcatgtgatctgtgcagccaaccagaatggttcacaagtagactgt
gaactgggaaacccattcaaaagagattctgagatcactttttacattatcctgagcact
gccaggatctccctccaaaccaccgaggttgtggttgagctccagctagagacaacaagt
ttgcagggtggtttagagaaagtgagggctaaagctaaagttgtgattgaacttctgctt
tcagtgcaaggggttgccaagccctcacaggtgtattttggagggaatgttagaggagag
agcgccatgaattcagaggaagaagttggaagtttgattgaatatgaatttagggtaatg
aatttaggcaagccactgaaatcttatggcacagcctccattaatatccagtggcctaaa
gaaagtgctgtggggaaatggcttctgtacctggtgaagatcacttcgaaagggctggag
aagatcacctgttcaccagaaaatgagatcaacccaaatggcctaattgaaggatccact
ttttccagaaggaagcgtcacacagagccaagcaggatatctgaagagactaaaagatct
cttttcacagataataggaaacacaaaaccttgtcatgtgctgtggatgccaaatgtgtg
gacatcaagtgccctctacagggattggacagtagtgctcacattgtactgaggtctcgc
ctttggaatacgactttccttgaagattacgcctcatataattatcttgacttgatagtg
aaagcctcaatcagtcttgatgtttctgctaagaacattgtgctgaagaatcctgagaca
caggtgagattgacgatcttccctgaaaatacagtggctcactatggtggagtgccatgg
tggatcattctggtggccgtattagcaggaatactgatgcttgctctgctagtgcttcta
ctctggaagtgtggatttttcaaacgttccaagtatgacgacagcattcctaagtaccat
gctgtgaggatccgtaaggagacgcgacactttacagatgaaagcatcatgtttgaccca
tttgagaagaagcagtggatgactatatggagtgagaatgaaagttactcctga

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