Tachysurus vachellii: 132850352
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Entry
132850352 CDS
T09596
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
132850352 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132850352 (hdac4)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132850352 (hdac4)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132850352 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
132850352
NCBI-ProteinID:
XP_060732812
LinkDB
All DBs
Position
8:complement(20238587..20404580)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSSHSHPDSLPSKEQSLELLKPSGLNHIPSVDVSAVLPVPVPPAAIPMDLRVDQQHLPVS
GEQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEVQMQEHIKHQQELLAMKHQQE
LLEHQRKLEQHRREQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKAL
AQRSLNHCMPNDPRYSYWKTQHSSLDQSSPPQTGMSTYNHPVLGLYDSKNDFPLRKTASE
PNLKLRSRLKQKVTERRSSPLLRRRDGPVTTAKKRSLDVTESACNSAPGSGPSSPNNSSN
NITNENGITSSISNSPVEPSLAHRLASREGPVSQLSLYTSPSLPNITLGLPATGSTTVAS
GQQEGERLAIAGLQPGLPITTPFITGAHLPSYLAASALEREGGSAHNPLLQHMAMLEQSQ
NPLVSGLSSLPLQSPSIHKLRPHRPLGRTQSAPLPQNTQALQQLVVQQQHQQFLVKQKQH
FQQQQLHISKIMATKPNEPGRQHESHPEETEEELREHQALNDPAEGLLHGVTIKQEPPDQ
LEEELQQRERQAEHELIFRQQALLLEQQRIHQLRNYQASMEAAGLSVTLPGHRPLSRAQS
SPASATFPIVVQEPPSKPRFTTGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQET
GLRSKCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDS
DTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSV
AIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPD
EVGSGPGVGFNVNMAFTGGLEPPMGDVEYLSAFRTIVMPIANEFAPDVVLVSSGFDAVEG
HPSPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELE
PLPEKVLQQRPNLNAVRSMEKVVEAHSKHWRCLQRSVSTLGYSLIEAQKCETEEAETVTA
MASLSVATKNMGKRSEEEPMEEEPPL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacagtcacccagatagccttcccagtaaagagcagtctctggagcttctc
aagccgtctggactcaaccacattccctctgttgatgtgagtgcggtgttgcccgttccc
gttccccctgctgccatcccgatggatctgcgtgtggatcagcagcacttgcccgtgtct
ggggagcagcagctgcagcaggagctcctggcactcaaacagaagcagcagatccagagg
cagctgctcatcgccgagttccagcggcagcacgagcagctctcccgccagcacgaagtc
cagatgcaggagcacattaagcatcagcaggagctgttggctatgaagcatcaacaggag
ctgctggagcaccagaggaagttggagcagcatcgtcgtgagcaggagctggagaaacag
cagcgtgagcagaaactgcagctgctcaaaaacaaggagcgtggccaggagagtgcggtg
gcgagcacggaggtgaagatgcgtcttcaggagtttgtgctgaataagaagaaagccctg
gcccagagaagcctcaaccactgcatgcccaatgacccacgctactcttactggaaaacc
cagcacagttcactggatcagagttctcctcctcagacagggatgtccacttacaaccac
ccagtgctgggactctacgattccaaaaacgactttccactccgcaagacagcgtcagag
ccgaatctgaaactgcgctccaggctgaagcagaaggtgacggagcgacggagcagtccg
ttgctgcggaggagggacggccccgtaaccacagccaagaaacgctctctggacgtgaca
gaatcagcttgtaacagtgcaccgggctctgggccgagttcacccaacaacagctccaac
aacatcactaatgagaacggcatcaccagctcaatctccaacagcccagtggagccttcc
ctggcacatcgtcttgccagcagagagggtcctgttagccagctgtctctgtacacatcc
ccctccctcccaaatatcactctgggcttgccagccaccggctccaccactgtggcgtct
ggtcagcaggagggtgagcggctggcgatagcaggcctgcagcccggattacccataacc
actccgttcatcactggagcccaccttccctcatatctggctgcctctgccttggagcga
gagggaggctccgcccacaaccctctgctgcagcacatggccatgctggagcagtcacag
aatcccctggtttcaggtctgagcagtctgcctttgcaatcaccctccatccataagctg
cgtcctcaccggccattgggtcgaacccagtcagcgccgctgccccagaacacacaggcc
ctgcagcagcttgtggtccagcagcagcaccagcagttcctggtcaaacagaaacagcac
ttccagcaacagcaactgcacatcagcaagattatggccactaaaccaaacgagccaggc
aggcagcacgagagtcacccggaggagacggaggaggagctgagggagcaccaagcactg
aacgacccggctgaaggcctgctgcatggagtcaccatcaaacaggagcctcctgatcag
ctggaggaagagttgcagcagcgagaaagacaggcagagcacgagctgatcttcagacag
caggctctccttttggaacagcagaggatccatcaactaagaaactaccaggcgtcgatg
gaggccgctggcctgtccgtcactttaccagggcaccgtcccctgtccagagctcagtcc
tctcctgcctctgcaacgttcccaattgtagtgcaggaacctccgtctaagccacgcttc
accaccgggctggtgtatgatactctaatgcagaagcaccagtgtatgtgtggcaacact
aacacccacccagagcatgccggccgaatccagagtatctggtccagactgcaggagacc
ggactgcgcagcaagtgtgagtgcatccggggcaggaaggccacactagaggaactgcag
acggtccactctgaggctcatgtgctgctctacgggaccaacccactgagacagaaatta
gacagctctgtgacacccatgtttgtgaggttgccctgtgggggcattggggtggacagt
gacactatctggaacgaggtacactcgtcaagcgcggctcgtctggccgtcggctccgtg
gtggaactggtgtttaaagtggcgtccggagaactgaagaacggtttcgctgtggtgcgg
cctccaggacaccacgccgaggagagcacccccatgggattctgttatttcaactcggtt
gccatcgcagccaaactcctccagcagcgactgaatgtcagcaagattttgatagtggac
tgggacgttcaccatggcaacggcacccagcaggccttctacagtgaccccaatgtgctg
tatctgtctctgcatcgctatgacgacgggaacttctttcctggcagcggcgctcctgat
gaggtgggctcagggcctggtgtgggcttcaacgtaaacatggccttcacaggcggtctg
gagcctcccatgggagatgtggaatatctgtctgccttcagaacaatagtgatgcctatt
gctaatgagtttgcgcctgatgtggtcctggtttcatcagggtttgatgctgtggagggc
cacccgtcaccactggggggatacaaactcacagccaaatgttttggctacctgaccaag
cagctgatgggccttgccggcggccgcctggtgctcgccctcgaggggggtcacgacctc
actgccatctgcgatgcgtctgaagcatgtgtttctgctttgctaggaaacgagttggaa
ccactacctgagaaggttcttcaacaaaggccaaatctcaatgctgtgcgctccatggag
aaagttgtggaagctcatagtaagcactggcgctgtctgcagcgtagtgtttcaacgctg
ggctactccctgattgaagctcagaagtgtgagacagaggaggctgagactgtaaccgcc
atggcctcattgtcggtagccaccaagaacatggggaaaaggtccgaagaggagccaatg
gaggaagaaccaccactgtag
DBGET
integrated database retrieval system
