Tachysurus vachellii: 132850367
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Entry
132850367 CDS
T09596
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tvc
Tachysurus vachellii
Pathway
tvc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132850367 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132850367 (xrcc5)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
132850367 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
132850367
NCBI-ProteinID:
XP_060732863
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Position
8:21185117..21198848
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AA seq
726 aa
AA seq
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MARASKSAVVLCMNVGFSMSNSSLGEEAPFHQAKKLVQKFIQRQVFAESKNELGIVLFGT
EDTKNPLAQDDQYQNICIYRHLMMADFELLEDIEHNLQPGGQNADWLDALVVCMDLLQKE
TMGKKYERLNIVVLTDLSTSACADQLDTIIGNLKRAGITLQFFLPFPVDADEVGAGDADR
PDMRRPPQSGKGLSREQKQGLKMVRQVMASLDEEDGLDEVHTFSDALEKLSIFKQIERRP
MAWPCQLTIGSSLSIRIIGYKAVCEEKIKKNWAVVDAESHQKDDVKRDTVYCLNDDNETE
VQKDDVIQGFRYGSDIVPFSKVDQEQMKYKSDGKCFAVLGFTKQELVHRHQFMGQQVVKV
FAGKDDEHAAVALSALIHALDSLKMVAIVRYVYDRRSNPQVGAAFPCVKDKYECLVYVQL
PYMEDLRQYMFPSLENKKKLVPSEAQLSAVDNLISSMMLVEEGEDGEMEDIFKVNKIPNP
QFQRLFQCLQHRGLNPDAPLPPMEPWLKRMLDRPQAVSARCRAPLQEMKKLFTLKEVVQK
KGQKTSADVFGKSTEEPDTKKFKMDEGEKFSLAETSEGNVTSVGSVNPAENFCTLVQKKT
IPFDQACKQLTHRMEQLLGNRSTDYYMKTIACIQAFREQSIKVSNANLFNSYMQSLKNSV
SDKNLQVFWDLLVADSIMLISKDEVDSSTVSKQEANQFLTFEEKQEVAAAPSHEDAGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcgtccaagtcagctgtggtgctttgcatgaatgtgggcttctctatgagt
aactcatcccttggtgaggaagccccattccatcaagctaagaagctcgttcagaaattc
atccagcgccaggtctttgctgaaagcaaaaatgagttgggaattgtgcttttcgggaca
gaagacaccaagaatccacttgctcaagatgaccaataccagaacatctgcatataccga
catctgatgatggctgactttgagctgctggaggatattgagcataaccttcagcctggt
ggtcagaatgctgactggcttgatgctctcgttgtatgcatggatcttctccaaaaggaa
accatggggaaaaagtatgaaaggctgaatatcgtcgtgctcaccgacctcagcacatca
gcctgtgcagatcagctagacaccatcattggcaacttaaagcgtgctggcatcaccttg
cagttcttcctgccgttccctgtggatgcagatgaagtgggtgctggagatgcagacaga
ccagatatgaggcgtccaccccaaagtggaaaaggtctgagcagggagcagaagcagggg
ctgaagatggtcaggcaggtcatggcttctctggatgaagaagatggcctagacgaggtt
cacactttcagtgatgctctggagaagctgtccatctttaagcagattgagagacgaccg
atggcttggccctgtcagcttactatcggaagctccctatccatccgcatcatcggatac
aaagctgtgtgtgaggagaagattaagaagaactgggctgtagtagatgctgagagtcac
cagaaagatgacgtaaagagagacacagtctactgcctcaacgatgacaatgagactgaa
gtgcagaaagatgacgtcattcagggtttccgttacgggagtgacattgtaccattctcc
aaagttgaccaagagcaaatgaagtacaagtcagatggaaaatgctttgctgttcttggg
ttcaccaaacaggagctggttcatcggcatcagttcatgggtcagcaggttgttaaggtt
tttgctggcaaagatgatgagcatgcagctgttgcgctctcagctctgattcacgctctg
gacagtctaaagatggtggctattgttcgttatgtttatgaccgccgcagcaacccacaa
gtgggtgcagcttttccttgcgtcaaagacaaatacgagtgcttggtatacgtgcagttg
ccatacatggaggacctccggcagtacatgtttccttcactggagaacaagaagaaatta
gttccatcagaggctcagctgtcagcagtggacaatctcatcagctctatgatgctggta
gaggagggtgaagatggagagatggaggacatattcaaagtcaacaaaatccccaaccca
cagtttcagagactcttccagtgccttcagcatcgcggtttgaacccagatgcacccctg
ccgcctatggagccttggctgaagcggatgctggatcgtccccaagccgtctctgctcgc
tgccgggctcctctgcaggagatgaagaaacttttcacactgaaggaggtggtgcaaaag
aagggccagaagaccagtgctgatgtgtttgggaaaagcaccgaggaaccagatactaag
aagttcaaaatggatgaaggggagaagttcagcctagcagagacttctgagggaaacgtt
acctctgtgggcagcgtgaaccctgcggaaaacttctgcactttagttcaaaagaagacc
attccctttgatcaagcatgcaagcagctcacccacaggatggagcagttgctgggcaac
aggagcaccgactattacatgaagaccatcgcatgtatccaggccttcagagagcagtcc
attaaggtatcaaatgcaaacctcttcaacagctacatgcagtctctgaagaacagcgtt
tcagacaaaaatcttcaggtattctgggatctgctcgttgcagattctataatgctaatc
agcaaggatgaggtggatagcagcacagtgtccaagcaagaggctaaccagtttttgact
tttgaagaaaaacaggaagtagcggctgctccttctcacgaggacgcaggagacgtggat
gatttgctggacatgatgtga
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