KEGG   Tachysurus vachellii: 132850831
Entry
132850831         CDS       T09596                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tvc04812]
    132850831 (katnb1)
Cytoskeleton proteins [BR:tvc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     132850831 (katnb1)
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_DCAF12 WDR54 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F PROPPIN Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Ge1_WD40 RMC1_N Cytochrom_D1 PD40
Other DBs
NCBI-GeneID: 132850831
NCBI-ProteinID: XP_060733386
LinkDB
Position
1:22631734..22638882
AA seq 672 aa
MAASNIKKISWKLQDVVAHPSNVSSLVLGKSSSRLLATGGDDCKVNIWAVNKPNCIMNLT
GHTSPVECVQFSTSEEQVVAGSQSGSLRVWDLEAAKIFRTLPGHKANICSVDFHPFGEYL
ASGSMDTIIKLWDLRRKGCVFRYKGHAQAVRCLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTSAVSVVQFHPNEYLLASGSADRTIKLWDLEKFKMVGSSEGETSGRCLLFSP
DGVCLYSGSDDMLRVYGWEPDCCFDVVPVGWGKVLDFAICSSQMIGVSCSQTNVSLHVVD
LDRVKKSKVVQEQTGKPQADPIPIAVTLRRNYERPSTSCSRQKMKQSADGDKSVEGERQS
PSSEDERDEESRAEITNPDDYKEIFQPHNAISRTPPKRNDPFPAPLVDESFQAKPHIAEE
VMTTLPAEPKAACTSSTVTATAPSQPVSVVAASVSRHVVTTSKVKPSLAVSPSPLVEPLS
LIFGDILQHGRSEKSSVTADDEALSQIRKGHGTMCVMLTSRNKNLDIVRALWASGDIKLS
LNSATSMNDTSVVVDILNIINLKPSLWKLDICMSILPQLEELLQSKYESYIQTGCTSLKI
ILKRFWPLISDTLSAPPSVGVDITREERLQKCKTCYKQLKNLSNVVKNRAEHVGRHGSTF
RELQLLMAPLDF
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggctgcgtccaacatcaagaaaatctcatggaagctgcaagatgtggtggcccacccg
agtaacgtgtcgtccctggtgttgggtaaatcgtcaagtcgcctgctggctacaggagga
gatgactgcaaagtcaacatctgggctgtcaacaaaccgaactgcattatgaatctgacg
ggccacacgagcccagtggaatgtgttcagttcagtacctctgaggagcaggtggtagct
ggatctcagtcaggatctctgcgggtctgggacttggaagctgcaaaaatatttcggaca
ttgcccggtcacaaggctaatatctgcagtgtcgactttcatccgtttggggaatacttg
gcctcgggctccatggatacaatcattaagttatgggatttgaggaggaaagggtgtgtg
ttcaggtataagggtcatgctcaagcagtgcgttgtctggcctttagccctgatggaaag
tggcttgcttcagccagtgatgacagcacaataaagctttgggatttaacggctgggaag
atgatcacagaattcacagcacacacctcggcagtttcagtcgtccagtttcacccaaac
gaataccttctggcttccgggagcgctgacaggaccataaagttatgggatttggagaaa
tttaagatggtcggctcatcggaaggtgaaacatctggaaggtgtctgttgttcagtcct
gatggtgtttgtttatacagcggctcggacgacatgctgcgtgtgtacggctgggagccg
gactgctgctttgacgtggtccccgtaggctggggcaaagtgctggactttgcaatctgt
agcagccaaatgatcggagtgtcgtgcagccagacgaacgtgagcttgcacgtcgtggat
ctggatcgagtgaagaaatccaaagtcgtccaggaacaaactggcaagccacaagccgat
cccattcctatagcagtgacgctaaggcgcaactatgaacggccttccacgtcctgcagc
agacagaagatgaaacagagcgcagatggagacaagtctgttgagggcgagaggcagagt
cccagcagcgaggatgagcgtgatgaagagagcagagcagaaatcacaaacccagatgat
tataaagagatctttcagccccataatgctatctcacgaacccctcctaaaaggaatgac
ccattccctgcaccacttgtagatgaaagtttccaagcgaagccccatatagcagaagaa
gtcatgactacgttgcctgctgaacccaaggccgcttgtacttcctccacggtaacggcc
acagcgccgtctcagccagtttccgtggtagcggcatcagtctcgaggcacgttgtcacg
acatccaaagtcaaacctagtttagccgttagcccgtccccgctcgtcgagccactcagc
cttattttcggggacattttacaacacgggcgaagcgaaaaaagcagcgtcactgccgac
gatgaggcgttgagtcagatcagaaaaggacatggcaccatgtgtgtgatgctgacgagc
agaaacaaaaacctggacatcgttcgggctctctgggctagtggagacatcaagttatca
ctcaattctgctacgtccatgaacgatacgtccgtcgtggtggacatcctcaatataatc
aacctcaaaccgtcactttggaaactggacatatgcatgtccattctgccccagctcgag
gagctactccagagtaaatatgaaagttacatccagaccggatgcacgtcgttaaagata
attctgaagcgcttttggccgttaatctcggacacgctgagcgcccccccctctgtcgga
gtggatattacgcgagaggagaggcttcagaagtgtaagacgtgctacaagcagctgaag
aacctcagcaacgtagtgaagaaccgtgcagaacacgtgggtcgacacggtagtactttc
agagaacttcagctcctcatggctccattggacttctga

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