KEGG   Tachysurus vachellii: 132850965
Entry
132850965         CDS       T09596                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    132850965
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tvc01009]
    132850965
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tvc04515]
    132850965
Protein phosphatases and associated proteins [BR:tvc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132850965
Cell adhesion molecules [BR:tvc04515]
 Cadherins
  Protocadherins
   132850965
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th CD34_antigen
Other DBs
NCBI-GeneID: 132850965
NCBI-ProteinID: XP_060733851
LinkDB
Position
1:complement(39123444..39128086)
AA seq 885 aa
MSKIRKGSCLIMDGKFWGFWILLLYTSPLSCFSKFSHLVYKIKEGLPKGILIGSVGEDLR
LDFSVDPPRLFHLELRQSGSQYVNLSETTGELYTSAFVIDRETLCAESYEGQGCMISLDV
LILPQQYFQLVKIKIVIEDVNDNKPHFPVDEIRVSVPENAPVNARFVVEQSAVDPDIGIY
GVQTYWLANDFGVFTLDVEQNEGGELTPFLIVTGPLDRETKAEYLTEFIAEDGGSPPFLG
IATLRIIITDVNDNCPKFSETQVNVTLSENTTKGLQLARLYAFDPDQGTNAQITYAFSKR
VTRETRNLFHLDEMTGVITLAGKIDSDTGKLYKLVVLANGQACIPDIATVTVKVVKMVLG
PLAVMPRYIALEKDGVVSLSESEPPFTPIAFFTIKNADPRKKVTCFLQGSGPFRLLPYKN
MNYEYLLETTDPLDYEEQKYYELTVVVRNTDGVGVDTQVKVQMLDDNDNAPIFKQSVIDI
KIEENNAPETFLAKLQATDKDSGNRGEVLYLLGSDAPPKFHLDRLTGVLTVTTSLDREEK
ETYRFIVRAVDCGTPRKESIATVSITVLDRNDNSPHFINKDFTFFVPENFPGFGEIGVLS
VTDADAGENGWVALSIINGSDIFVIDTGRGALRAKTSLDREQQGTYYLWIEAVDGGKPSL
SSVTMVTILLLDVNDNPPMVLFPQSNQSYLLVLPSTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRRGGEPGSFDIDPNTGNITLRKVLSDRGLYSLLVKVSDHGQPEPLHSTIMVNLFVN
ETISNETYIQSLLTREADIGIEEVRPPNRLAQRPEYGDLFPCKLLIIALITTCLGLFFIV
VSLTAYICCKSQKNHKKKRLEVEIPLKVNSDRQAMDRKLMEISNI
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgagcaagatacgcaaaggatcctgccttattatggatggaaagttctggggattttgg
attctactgctgtacacaagtcctctatcatgtttctcaaagttcagccatcttgtatat
aagataaaggaaggcttacccaaggggattctcatcgggtctgttggagaagatttgagg
ttggatttttctgtcgaccccccacgtctgttccatctggaattaaggcaaagtggctct
cagtatgttaatctaagcgaaacaaccggggagctttacacttctgcttttgtgattgac
cgagaaactctatgtgcagaatcctatgagggtcaaggatgcatgatctctctggacgtg
ctcattctgccacagcagtacttccagctagttaagatcaaaatcgtcattgaagatgtt
aatgataacaagccacattttccagtggatgagatcagggtgtccgttccggaaaacgca
ccagtcaatgctcggtttgtggtagagcaatctgctgtagatccagatataggcatttat
ggggttcagacttactggctggcaaatgactttggagttttcacactggatgttgagcaa
aatgaagggggagagttgacgcctttcctgatcgttactgggccgctggacagggaaacg
aaagcggaatatttaactgaattcattgctgaggacggaggatccccgccatttttgggc
attgccactcttagaattattattacagatgtaaatgacaactgccccaaattcagcgag
actcaggtaaatgtgacactttctgaaaataccacaaagggcttgcagttggctcggctc
tatgcctttgacccagatcagggtaccaatgctcagattacttacgcgttcagtaaacgg
gtcaccagagaaactcggaacctgtttcatttggatgaaatgacaggggtcatcacccta
gcaggaaagattgattctgacactggaaagttgtacaagctggttgtgctggctaacggg
caagcttgcatacctgatatcgctaccgtaactgtgaaggttgttaaaatggttttggga
ccactagccgtcatgccccgctacattgctttagagaaagatggtgtggtttctctgagt
gaatcagagccaccctttacaccaattgctttctttaccataaaaaatgcggacccaagg
aaaaaggtcacgtgctttttgcaagggtctggacccttccgactcttgccatataaaaat
atgaactatgagtacttgctggagactaccgatccattggattatgaagagcagaaatat
tatgaacttactgtggtggtcagaaacactgatggtgtaggtgttgatacacaggtgaaa
gtgcagatgctggatgataatgataatgcacccatatttaagcagtcagttattgatatc
aagattgaggagaacaacgccccagaaacatttctcgctaaactccaagccactgataag
gacagcggtaacaggggagaggtactctatcttcttgggtcagatgctcccccaaaattc
caccttgatcgattgactggggtcttgactgtgaccacatcgcttgaccgagaggagaaa
gagacctaccggtttatagttcgagcagtcgattgtggcacaccaaggaaggagtcaatt
gccacagtttcaatcaccgtgctggaccgcaacgacaatagtcctcattttatcaataaa
gatttcaccttcttcgtcccagagaacttcccaggctttggggagattggagtgctgtct
gtcacagatgcagatgctggggaaaatggctgggtggcactatcaatcatcaatggaagt
gatatatttgtcattgacacaggacggggggcactgagagcaaagacctcactggacagg
gagcagcaaggaacgtactacctctggatcgaagctgtggacggcgggaagccttcactc
tcttctgtcaccatggttactattttgctcctggatgttaacgacaacccaccaatggtg
ctgttcccccagtccaaccagtcctatttgctagttcttcccagtacactcccaggaaca
tccattacagaggtctacgctgtggacagagacacaggcatgaatgctgtcattgcttac
agcatcatcaagcgaaggggtggggaaccaggctcgtttgacatagacccaaatacagga
aacatcactctcaggaaagttttgagtgaccggggtctgtacagcctgctggtcaaggtc
agtgaccatggccaacctgaaccactgcactcaactattatggtcaacctgtttgtcaat
gagaccatcagcaacgagacatacattcagagcctcctgactcgagaagcagatatcggg
attgaggaggtcagaccaccaaacaggctcgcccagaggcctgagtacggtgacctgttc
ccctgcaagctactaattattgcccttattaccacatgtctggggcttttctttatagtg
gtgtcactgactgcatatatatgctgtaagagccaaaaaaatcataaaaagaagagattg
gaagtagagatccctttaaaagtgaacagtgacagacaagccatggacaggaagctgatg
gaaatttctaacatatga

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