Tachysurus vachellii: 132850965
Help
Entry
132850965 CDS
T09596
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132850965
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132850965
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132850965
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132850965
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132850965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
132850965
NCBI-ProteinID:
XP_060733851
LinkDB
All DBs
Position
1:complement(39123444..39128086)
Genome browser
AA seq
885 aa
AA seq
DB search
MSKIRKGSCLIMDGKFWGFWILLLYTSPLSCFSKFSHLVYKIKEGLPKGILIGSVGEDLR
LDFSVDPPRLFHLELRQSGSQYVNLSETTGELYTSAFVIDRETLCAESYEGQGCMISLDV
LILPQQYFQLVKIKIVIEDVNDNKPHFPVDEIRVSVPENAPVNARFVVEQSAVDPDIGIY
GVQTYWLANDFGVFTLDVEQNEGGELTPFLIVTGPLDRETKAEYLTEFIAEDGGSPPFLG
IATLRIIITDVNDNCPKFSETQVNVTLSENTTKGLQLARLYAFDPDQGTNAQITYAFSKR
VTRETRNLFHLDEMTGVITLAGKIDSDTGKLYKLVVLANGQACIPDIATVTVKVVKMVLG
PLAVMPRYIALEKDGVVSLSESEPPFTPIAFFTIKNADPRKKVTCFLQGSGPFRLLPYKN
MNYEYLLETTDPLDYEEQKYYELTVVVRNTDGVGVDTQVKVQMLDDNDNAPIFKQSVIDI
KIEENNAPETFLAKLQATDKDSGNRGEVLYLLGSDAPPKFHLDRLTGVLTVTTSLDREEK
ETYRFIVRAVDCGTPRKESIATVSITVLDRNDNSPHFINKDFTFFVPENFPGFGEIGVLS
VTDADAGENGWVALSIINGSDIFVIDTGRGALRAKTSLDREQQGTYYLWIEAVDGGKPSL
SSVTMVTILLLDVNDNPPMVLFPQSNQSYLLVLPSTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRRGGEPGSFDIDPNTGNITLRKVLSDRGLYSLLVKVSDHGQPEPLHSTIMVNLFVN
ETISNETYIQSLLTREADIGIEEVRPPNRLAQRPEYGDLFPCKLLIIALITTCLGLFFIV
VSLTAYICCKSQKNHKKKRLEVEIPLKVNSDRQAMDRKLMEISNI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatacgcaaaggatcctgccttattatggatggaaagttctggggattttgg
attctactgctgtacacaagtcctctatcatgtttctcaaagttcagccatcttgtatat
aagataaaggaaggcttacccaaggggattctcatcgggtctgttggagaagatttgagg
ttggatttttctgtcgaccccccacgtctgttccatctggaattaaggcaaagtggctct
cagtatgttaatctaagcgaaacaaccggggagctttacacttctgcttttgtgattgac
cgagaaactctatgtgcagaatcctatgagggtcaaggatgcatgatctctctggacgtg
ctcattctgccacagcagtacttccagctagttaagatcaaaatcgtcattgaagatgtt
aatgataacaagccacattttccagtggatgagatcagggtgtccgttccggaaaacgca
ccagtcaatgctcggtttgtggtagagcaatctgctgtagatccagatataggcatttat
ggggttcagacttactggctggcaaatgactttggagttttcacactggatgttgagcaa
aatgaagggggagagttgacgcctttcctgatcgttactgggccgctggacagggaaacg
aaagcggaatatttaactgaattcattgctgaggacggaggatccccgccatttttgggc
attgccactcttagaattattattacagatgtaaatgacaactgccccaaattcagcgag
actcaggtaaatgtgacactttctgaaaataccacaaagggcttgcagttggctcggctc
tatgcctttgacccagatcagggtaccaatgctcagattacttacgcgttcagtaaacgg
gtcaccagagaaactcggaacctgtttcatttggatgaaatgacaggggtcatcacccta
gcaggaaagattgattctgacactggaaagttgtacaagctggttgtgctggctaacggg
caagcttgcatacctgatatcgctaccgtaactgtgaaggttgttaaaatggttttggga
ccactagccgtcatgccccgctacattgctttagagaaagatggtgtggtttctctgagt
gaatcagagccaccctttacaccaattgctttctttaccataaaaaatgcggacccaagg
aaaaaggtcacgtgctttttgcaagggtctggacccttccgactcttgccatataaaaat
atgaactatgagtacttgctggagactaccgatccattggattatgaagagcagaaatat
tatgaacttactgtggtggtcagaaacactgatggtgtaggtgttgatacacaggtgaaa
gtgcagatgctggatgataatgataatgcacccatatttaagcagtcagttattgatatc
aagattgaggagaacaacgccccagaaacatttctcgctaaactccaagccactgataag
gacagcggtaacaggggagaggtactctatcttcttgggtcagatgctcccccaaaattc
caccttgatcgattgactggggtcttgactgtgaccacatcgcttgaccgagaggagaaa
gagacctaccggtttatagttcgagcagtcgattgtggcacaccaaggaaggagtcaatt
gccacagtttcaatcaccgtgctggaccgcaacgacaatagtcctcattttatcaataaa
gatttcaccttcttcgtcccagagaacttcccaggctttggggagattggagtgctgtct
gtcacagatgcagatgctggggaaaatggctgggtggcactatcaatcatcaatggaagt
gatatatttgtcattgacacaggacggggggcactgagagcaaagacctcactggacagg
gagcagcaaggaacgtactacctctggatcgaagctgtggacggcgggaagccttcactc
tcttctgtcaccatggttactattttgctcctggatgttaacgacaacccaccaatggtg
ctgttcccccagtccaaccagtcctatttgctagttcttcccagtacactcccaggaaca
tccattacagaggtctacgctgtggacagagacacaggcatgaatgctgtcattgcttac
agcatcatcaagcgaaggggtggggaaccaggctcgtttgacatagacccaaatacagga
aacatcactctcaggaaagttttgagtgaccggggtctgtacagcctgctggtcaaggtc
agtgaccatggccaacctgaaccactgcactcaactattatggtcaacctgtttgtcaat
gagaccatcagcaacgagacatacattcagagcctcctgactcgagaagcagatatcggg
attgaggaggtcagaccaccaaacaggctcgcccagaggcctgagtacggtgacctgttc
ccctgcaagctactaattattgcccttattaccacatgtctggggcttttctttatagtg
gtgtcactgactgcatatatatgctgtaagagccaaaaaaatcataaaaagaagagattg
gaagtagagatccctttaaaagtgaacagtgacagacaagccatggacaggaagctgatg
gaaatttctaacatatga
DBGET
integrated database retrieval system