Tachysurus vachellii: 132851049
Help
Entry
132851049 CDS
T09596
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tvc04990
]
132851049
Domain-containing proteins not elsewhere classified [BR:
tvc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
132851049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF_3
TB
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
132851049
NCBI-ProteinID:
XP_060733607
LinkDB
All DBs
Position
9:10146127..10570257
Genome browser
AA seq
1726 aa
AA seq
DB search
MFRTLILLLCCVSALLHVSPAAERIKVLFTPTICRQRCSNGHCINNCKRGNITTLYSNED
VTSTSGFRVFLCPMLCKNGGVCIKKDRCLCPTNFTGKFCHIPVTSSSTTSHEIEKLSPSG
TFLMRSEYFLPLQSRQQNQTNGSPLVTVRVHHPPEATVKIHQVMKVTSSSSSETVARSSS
LSGSHGSSKHSSTFLSDRAEAPSALVQAQTFRGDSIYTEASGFKYCFREVRNGQCSSPLP
GLRSQETCCRGDGLAWGIKECTLCPPISGSGTNGEKSCPKGFERVNGTQCVDINECLQPG
FCENGKCVNTRGSYSCVCKPGFLLDASHGLCISQKVISEEKDQCFRIVSQGFCSMPILKN
ITKQICCCSRVGKAWGRKCEACPYFGSVEFKEICPAGPGYHYSPNTLKLNPRVAEPHRPA
LVSQINRTSTTVTRYDTSLLQSTTRNEPPHNQRPTRPQSPTISHNVKIQQSSTGQRQPLT
SEVFIIQSEPQLSQHRQTGGLASSTSQPSRERSFVIRTQTSRPSIIRQHYSEFGPLRGPS
TVRPPPPITDKRACEANPQVCGPGRCVDMPGGKHTCHCNPGFILNSQAGHCQDINECLLS
PRPCLSGHCENTLGSFQCVCPSGYQTNSQKNLCTDIDECRLIPNPCVNGRCENTHGSFRC
VCRTGYKLQNNTCIDIDECDDSLRCPGKECVNTQGSYNCVSCKPGFGLLNGQCTDIDECR
QSPSLCSSGRCENTPGSYRCVCNKGFKLQGNICTDVNECEDSLQCPGQGCINTLGSYRCV
SCEPGFELTNRRCTDIDECRQVPATCANGRCENTPGSYKCVCHTGYKLQDNKCTDINECE
NHLQCRGQVCVNTPGSYRCRSCGAGFSFHNGQCTDVDECAQNTRLCGNGRCENTPGSFQC
VCQPGYRLESNACIDVDECKNELQCPGQKCVNSVGSFKCVSCSPGFEVINGQCQDVDECS
HTPSPCSNGRCENTPGSYMCVCRSGFKLQGNTCTDVDECKSSGICGAMSKCVNTDGSYRC
ECLPGFRAAGPGRQCRDINECLEDEFCFPKGECVNTDGSYMCVCSQGYYTSANGTLCLDV
DECTRDGVCEDGRCKNTDGSFTCDCKSGFTANPEKTACLDVDECVDSGGSVCGSQRCENT
IGSFRCFITCEPGYSLTATGECVDINECANESVCGQHMFCRNLIGTYQCICDQGYETTPD
GRSCVDINECAVMVGVCGAARCWNVEGSFMCECEKRQEEFDPLTRQCVTAGSGSESLSHL
PQPGERIECYFNVDERDQCAVLSSNTTVQECCCTVGRAWGLKCHYTFCPQAGTSEFQAMC
PNGRGYVTSAVGAFGYRDVDECKLFDPDVCKGGVCVNNIPGYSCYCPSGYYYDMNLLECI
DNDECESGDMCPGGVCVNTLGSYYCTCEPPLVLDDTQRSCVNNSGLTVDENLSFCWQHVT
ADLVCQRLLRGIQVTFTECCCLYGEAWGLQCALCPRRDEEEYEAMCTTFGPPPNSPRYAE
RFAPLPGGGGGYGTPYGEVIYQELPRTSDYDYYSVGTGRRPGLRTRPADSYTPFVPPGLG
SRPYYEEEDYDSAAAPPFAPDPRNERFYGSRFSPGLLTEGDEDEESWRDPAPLPPFTDRR
PGSERPQRVYERRYESFAGLPEDECGILQGCENGRCVRVGEGYTCDCYDGYQLDISSMTC
LDVDECKDPTFPECRNAQCVNTEGSYRCVCLRGFIASRRPNYCIPA
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacactgattttgctactgtgttgtgtgtcggcactgctgcatgtgtctcca
gcagccgagaggattaaagttctcttcacgccaaccatctgcaggcagcgctgctccaat
ggacactgcatcaacaactgcaagcgaggcaacattaccacgctgtatagcaatgaggat
gtgacaagcacgtctggctttagagtgtttctgtgccccatgttgtgtaaaaacggaggt
gtgtgcattaagaaagatcgatgtctctgtcctaccaactttactggaaagttctgtcat
atccctgtgacttcatcctccaccacttcccacgagattgagaagctttctccaagtggt
acttttctgatgcgttcggagtacttccttcccttacagagtcgacagcagaaccaaacc
aacgggtctccactggtgactgttcgagtgcatcatcctcctgaagcaacggtgaagatc
caccaggtgatgaaagtcacttcaagttccagctcggagacggtggcacgatcatcaagc
ctctcaggttcccatggtagcagcaaacatagcagcacatttctgtcagacagagcagaa
gctccaagtgctcttgtccaggcacaaactttcaggggagactctatctacacagaggct
tctggatttaaatattgctttagagaagtccgcaatggacagtgcagttctcccctgcct
gggctccgcagtcaggaaacgtgctgcaggggagatggtttagcatggggaataaaagag
tgtacactctgccctccaatatcaggaagtggtacaaatggagagaaaagctgtccgaaa
ggctttgaaagggttaatggtacacagtgtgtggatattaacgagtgcttgcagccgggt
ttctgtgagaacggcaagtgtgtgaacacccgtgggagctacagctgtgtttgcaaacct
ggtttcttattggatgcttcacatggcctctgtatctctcagaaggtgatttcagaggag
aaggatcagtgtttccgtattgtctctcagggcttctgctctatgcccattctgaagaac
atcaccaagcagatctgctgctgcagtcgtgtgggtaaagcctggggaaggaaatgtgag
gcctgcccatattttggatctgttgaatttaaggagatttgtcctgctggtcctggctac
cattactcacccaacaccttgaagttgaatccaagggttgctgaaccacacagacctgct
ctggtttctcagatcaatcgcacttcgactacagtgactagatatgatacatcattatta
caatcaacaacaagaaatgagccgccacataaccaaagacctacaagaccccaatctcca
actatcagccataatgtcaagattcagcagtccagtactggtcagagacagccacttaca
tcagaggttttcatcattcagagtgaaccacagctaagtcagcacagacaaacaggaggg
cttgcttcgtcaactagccagccaagcagggaacgttcctttgttattaggacccagaca
agcaggccatcgattatcagacagcattattctgaattcggacctctccgaggtccctcg
acggtccgtccacccccaccaataacagataaacgtgcatgtgaagctaacccacaggtt
tgtgggccaggtcggtgtgttgatatgcctggaggtaaacacacatgtcattgtaatcct
gggttcatcctcaattctcaagcaggtcattgccaagatataaatgaatgtttgttgtct
ccaaggccgtgtttgagtggtcactgtgagaacacactgggaagttttcagtgtgtgtgt
ccttcaggttaccagactaattcccaaaaaaacctttgcacagatattgatgagtgtcgt
ctgatccctaacccttgtgtaaatgggcgctgtgagaacacacacggcagcttcaggtgt
gtgtgcaggacaggatacaaactgcaaaacaacacctgcatagacattgatgagtgtgat
gactcactccgctgtccaggaaaggagtgcgtaaacactcaaggttcctacaattgtgtg
tcctgcaaacctggatttggtctccttaatggccagtgcacagatattgatgaatgtcgt
cagagtccatctctttgctctagtggccgctgtgagaacacacctggcagctacagatgt
gtgtgtaataaaggttttaagctacagggtaacatctgcacagatgtgaatgaatgtgag
gactctctgcagtgccctggtcagggatgtattaatacactgggttcatatagatgtgtg
tcttgtgaacccgggtttgaattaaccaacagaagatgcacagatatcgatgagtgtcgt
caggttcctgccacatgtgccaatgggcgctgtgagaacacacctggcagctacaaatgt
gtgtgtcatacagggtacaagcttcaagacaacaaatgcacagatataaatgagtgcgag
aaccacctgcagtgtcgtggtcaggtgtgtgtcaacactccaggttcataccggtgcaga
tcatgtggcgctggattcagctttcataatggacaatgcacagatgtggatgagtgtgct
caaaacacacgtctctgtggtaatggacgctgtgaaaatacccccggaagtttccaatgt
gtgtgtcaacctggatacagactggaatcgaatgcctgtatagatgtggacgaatgtaag
aacgagcttcagtgtccaggacaaaagtgtgtgaattcggttggctctttcaagtgtgtt
tcgtgcagtccaggctttgaggtcattaatggccagtgtcaagatgtggatgaatgcagt
cacactccttccccatgctctaacggccggtgtgagaacactcctggaagctacatgtgt
gtgtgtcgctctggattcaaactgcagggaaatacctgcactgatgttgacgaatgtaag
agctctggaatatgtggggctatgagtaagtgtgtgaatacagacggatcatacaggtgc
gaatgtttgcccggtttccgtgctgcaggacctggacgccagtgccgagacattaacgaa
tgtttggaggacgagttctgcttccctaaaggagagtgtgtgaatacagatggttcatac
atgtgtgtgtgctctcagggttactacacaagtgccaatggaactctctgtcttgatgtg
gatgagtgtacccgggatggagtctgtgaggacggacgctgcaaaaacactgatggctca
tttacatgtgactgcaaatctggtttcactgcgaatccggaaaaaacagcctgcttggat
gtggatgaatgtgtggactctggtgggagtgtgtgtggttctcagcgctgtgagaatacc
atcggctcgtttcgctgcttcatcacctgtgaacctggatacagcctcacggctacagga
gagtgtgtggacattaacgagtgtgcgaacgagagtgtgtgtggccagcacatgttctgt
aggaacctgattggaacatatcagtgtatctgtgaccaggggtatgagacaactccagac
gggcggtcctgtgtggacattaatgagtgtgcagtgatggtgggtgtgtgcggagcggca
cgctgttggaatgttgaaggttcattcatgtgtgaatgtgagaagcggcaggaagaattt
gacccacttacaagacagtgtgtaaccgcagggtcagggtcagagtcattatcacaccta
ccccagccaggagagcggatagagtgttattttaacgtggatgagagggaccagtgtgca
gtcctttcttctaatacgactgtacaggagtgctgctgcactgtgggacgagcctgggga
ctcaagtgccattacactttctgcccacaagctggaacatctgaattccaagcaatgtgt
ccgaacggacgtggatatgtgacttctgcagtgggggcctttggctatagggacgtggac
gagtgtaaactcttcgaccccgatgtgtgtaaaggtggtgtgtgtgtaaacaacatccct
ggttactcgtgttactgccccagtggctactactacgacatgaacttattggagtgtata
gataatgatgagtgtgagagtggggatatgtgtccaggcggtgtgtgtgtgaatacactt
ggttcatattactgcacgtgtgagccgcctctagtgctggatgacacacagcgctcgtgt
gtcaacaattcaggcctcactgttgatgagaatctgtcattctgttggcagcatgtaaca
gctgatctggtgtgtcagaggctcttgcgaggaattcaagtgacatttacagagtgttgc
tgtttatacggagaagcatgggggcttcagtgtgctctgtgtccacgcagagatgaggag
gaatatgaggcaatgtgcaccacttttggtcctcctccaaattcacctcggtatgcagag
cgttttgccccactgccaggtggaggagggggttatggaacaccatacggtgaggtcatt
taccaagagctacctcgtacgtctgattacgattactacagtgtagggacaggacgcaga
cctggattgaggacacgcccggctgactcatataccccttttgtgcctcctggtctcggc
tccaggccttactatgaggaggaagattatgactcagctgctgctccgccatttgcacca
gatcctcgtaacgagcgcttctatggctcacgatttagtcctggcctcctcactgaaggt
gatgaagatgaggagtcatggagagaccccgcccctctcccacccttcactgatagaaga
ccaggaagtgaaagaccacagcgagtctatgaaaggcgctacgagtcattcgctggcttg
ccagaggatgagtgtggtatactgcagggctgtgaaaatggccgctgtgttcgtgtaggt
gaaggatacacctgtgactgttatgatggctatcagctcgatatctcctctatgacctgt
ctagatgtggatgagtgcaaggatccaacctttccagagtgtagaaatgcacagtgtgta
aacacagaaggttcatataggtgtgtgtgtctgaggggattcatcgcatcacgcagacca
aactactgcatacctgcttaa
DBGET
integrated database retrieval system
