Tachysurus vachellii: 132851054
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Entry
132851054 CDS
T09596
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132851054 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132851054 (trip12)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132851054 (trip12)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
HECT type E3
132851054 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
132851054
NCBI-ProteinID:
XP_060733616
LinkDB
All DBs
Position
9:complement(10658339..10698477)
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AA seq
2073 aa
AA seq
DB search
MSIRINHTAGGSLRRSQRNTLATRLQSEQTKQKTNSPPESKRSYTKASKAPPTPAAGSSR
GHAPRRNSLSLSSLSNPASDPDSETAGSSGQHEQREVSNSRALKRSSAPDHTTTTYSPSP
AKRPKAPPLESSEQPEPAGSTADSAPELPPSARSKKRRLAAEHPASRTLNRKSGTCPAPS
TSHKRKKTDTPFSSSSSSSFSSSSSFLSGSSSEQTSRSSKPSKLASKLAASAKSVTDSAS
SSSASSSSFTSSSSSSSSVVVAGASGCAPPSQGARLKQGKDQSKSRRSRSASSPSPRRSS
RDKEHSKSSTAASKFDWTSRFSPRVNLPKPRLALPGSSKPETPSGSSKPGPSGLQAKLAS
LRKSTKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAAETRRQDKMAENDN
NQDGANSSRTEETPQGASAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLF
GPRMSQLFHRTIGTGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPV
KSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDV
AEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFH
FVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVV
TPPVLSSGMFIMVVRMFSLMCSNCPNLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVP
RSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAHTTEAAVWQWRDDRGLWHPYNRI
DSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLINPNTGHV
EVRGEDARAELMREEAELARCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFSDSE
LLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKN
LAESESFLPSPPKACTSGITAATTTITTATTPAASSITPDLGSPSFHNNMEDSLDLSPQG
RLSDVLKRKRLPRRVPRRPKYSPPRDDDKVDNQAKSPTTTASPKSSFLASLNPKTWGKLG
AQNNSTNSEPSRTAGVSGLARTANKDSVSNNRDKIKAWIKEQASKFVERYFNSENVDGSN
PALNVLQRLCTATEQLSLQVDGGLECLVEICSIVSESDVSSFEIQHSGLVKQMLLYLTSN
SERDIVSRDERIKRFLHIFYGSPVPGQEPLFRLEPTENGSLLALVHKMNSCLSQMEQFPV
KVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIE
RYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIADHLLPYNMTV
YQAVRQFSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGCKDSVGGKRGRA
QTAPTKTSPRNAKKQDELWHDGVCPSVSNPLESYLISEPPEGITFDDPSLEVILLLRVLH
SISRYWFYLFDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCP
FFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELL
KQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLAN
PKGSQEGTKYMFSSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLG
LPFYKWMLRNESSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDKSYTREMLQQALES
LNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVVYWTLNEGVSRQFE
SFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFL
FEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTC
VNYLKLPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaggattaatcacactgcaggggggtcactgcgccgatcacagaggaacaca
ctcgccaccaggttgcagtcagaacaaaccaaacaaaaaacaaattcacctcctgaaagt
aaaagatcatatactaaagcttccaaagccccgcccacgcctgcagctggctcctcgcgt
ggccacgcccctcgacgaaacagtctctctctctcttcactaagtaaccctgcgtccgac
ccggattcggagacagcaggaagctcaggccaacacgagcagcgcgaagtcagcaacagc
cgtgctctcaaacgtagctctgcacctgatcacaccaccaccacctactcgcccagcccg
gccaagaggcccaaagctccgcccctcgagagctcagagcagccggaacctgctggctct
actgctgactctgcacctgagctcccaccctcagccaggtcaaaaaagcgacgtttggca
gctgagcatcctgctagcaggacattaaacaggaagagcggcacgtgcccagctcctagc
acctcccacaaacgcaaaaaaacagacaccccatttagttcctcttcttcctcctcgttc
tcttcctcttcctcgtttttatctggctcgagcagcgagcagaccagccgctcatccaaa
ccctccaaactggcgtccaaattggccgcctcggccaaatccgtgactgactccgcctct
tcctcctccgcttcttcttcctccttcacttcctcttcctcctcctcctcttctgtggtg
gtcgctggtgccagcggctgtgccccgccctcgcagggcgcccggctcaagcagggtaaa
gatcagagcaagtctcgtcgttcgcgctctgcctcttcgccatctcctcgccgcagcagt
cgtgataaagagcacagcaaatccagcacagctgcctctaaattcgattggacgagtcgc
ttcagtcccagagtgaacttaccgaagcccagactcgccctgcccgggtcctcaaaaccc
gaaacgccatcagggtccagcaaacccggcccgagcggactgcaggccaaactcgccagt
ctgagaaagtccactaagaagcgtagtgagtctccccctgcagaactccccagttttagg
aggagcacacgacaaaagaccacgggctcctgcgccagcaccagtcggcgaggttcaggt
ttagggaagcgtggtgcagctgaaactcgccgacaggacaaaatggccgaaaacgacaac
aatcaggatggagccaattcatcacgcacagaggaaacgccgcagggagcatcagcagcc
tccagctcagtagccggcgctgtagggatgaccacatccggagagagcgaatcagatgac
tcggaaatgggccgattgcaagctctactggaggcacgtggtctgccccctcaccttttt
ggtcctcgtatgtcccagctattccatcgcaccattggcaccggagcaagttcgaaagcc
cagcagctgctgcagggtctgcaggctacaggggacgagtctcagcagctgcaggcagca
atagagatgtgccagctgctggtgatgggcaatgaagagacactgggaggatttcctgtg
aagagtgtcgtacctgctctgatcacactgttacaaatggagcataactttgatattatg
aatcatgcatctcgtgctctaacctacatgatggaagctctgcctcgctcttctgctgta
gttgtagacgccattcctgtcttcctggaaaagcttcaggtcatccagtttatcgatgtg
gccgaacaggctctcaccgcactggagatgctctcacgaagacatagcaaggccatcctg
caggccggtgggttggctgactgcttgctgtacctggagtttttcagtattaacgctcag
aggaatgcattagccatcgccgctaactgctgccagagcatcacacccgacgagttccac
ttcgtagccgactcgctgcctctactcactcagagactcacgcaccaggataaaaaatca
gtggagagcacatgtctctgtttcgcccggctggtggacaactttcagcacgaagagaat
ttgttgcagcaggtggcatcacgtgatctgctcacgaacatccagcagcttcttgtggtg
acgccgccggtgttgagttcagggatgttcattatggtggtgcgcatgttctccctcatg
tgctccaactgccccaaccttgctgttcagctgatgaagcagaatatcgcagagacattg
cgtttcctgctttgtggagcatctaatggaagctgtcaggagcaaattgaccttgttccc
agaagtccccaggagctctatgagctcacttcccttatctgtgagctgatgccttgcctc
cccagagagggcatttttgctgtagatgccatgttgaaaaagggcagcgcacacactaca
gaggccgcagtgtggcaatggagggacgaccgaggcttgtggcatccatacaaccgtatt
gacagtcgtatcattgagacggctcatcagaacggcgaggacgagatcagcctttcgacg
ctcggacgagtttacaccatcgacttcaactctatgcagcagatcaacgaggacacggga
acggcacggggaattcagaggaaaccaaatcccctgatcaaccccaacaccggtcatgtg
gaggtgcgtggtgaggatgcacgtgcagagctgatgcgggaggaggcagagctagcccgc
tgcttcattaagactctgtttggtgtgctgtatgaagtgtacagctcctcggccggaccc
gccgtcagacacaagtgcctcagagccatcctgcgcatcatctacttctccgactccgag
ctgctcaaggatgtgctgcgtaaccacgccgtctccagtcacatagcctctatgctgtcc
agtcaggacctgaagattgtggttggctctctgcagatggcagaaatcctcatgcagaaa
ctacctgatgtgttcagtgtgtacttcaggagagaaggtgtgatgcaccaggtgaagaac
ctggccgagagcgagtcgttcctccccagtccgcccaaggcgtgcactagcggcatcacc
gcggcaaccaccaccatcactacggcaaccacacccgccgcatccagcatcacaccggat
ttgggttcaccgagtttccataacaacatggaggactcgctggacctcagcccacagggt
cgtcttagtgatgttttgaagaggaagcgtctccctcgcagagtaccacggcgtcccaaa
tattctccacccagagatgatgacaaagtggacaatcaggctaagagtcccaccaccacc
gcttctcccaaatcgtctttccttgcaagtcttaaccccaaaacctggggaaaacttggt
gctcaaaacaatagcactaactctgagccatctcgcactgccggggtcagcggcctcgca
cgcacagctaacaaagactccgtgtctaataacagggacaagattaaggcatggataaaa
gagcaggccagcaagtttgtggagcgctacttcaattcagaaaacgtggacggcagcaac
ccagcactaaatgttctgcagagactgtgtactgctacagagcagctcagcctgcaggtt
gacggcggtctggagtgtttagtggagatctgcagcattgtgtccgagtcagatgtgtcc
tcattcgagattcagcacagtggcctggtgaagcagatgctgctctatttaacctccaac
agcgagagagacattgtcagcagggacgagaggatcaagagattcctgcacattttctac
ggcagtcctgttcctgggcaggagccactgttccgattggagccaacagaaaatgggtcg
ctgctggcacttgtgcacaaaatgaacagttgcctgagtcagatggagcagtttcctgtt
aaagtgcatgattttcccagtgggaatggcaatggcagcagaggttctcaagcactaaaa
ttcttcaacacacaccagctgaagtgccagctgcagagacacccagactgcaccaacgtg
aagcagtggaagggggggcctgttaaaatagaccctcttgctttagtgcaggccattgag
agataccttgttgttagaggatacggccgaatcagagaggaggatgaggacagcgatgac
gatggatcagacgatgaaatcgatgagtcacttgcggctcagttcctgaattctggcagc
gtgcgccaccggctgcagttctacattgctgatcacctgctgccctacaacatgactgtg
taccaggcggtgcgtcagttcagcctgcagccagaggaggagcgggagagcactgacgac
gaggccaaccctctcggtcgtgccggcatctggaccaaaacacacacgatatggtataag
ccggtcagagaggatgaggatggctgcaaggactccgtaggagggaaaagggggcgagca
caaacggctcccactaaaacttcaccgcgtaacgctaagaaacaggacgagctgtggcac
gatggtgtgtgtccaagtgtcagtaacccgttggagtcgtacctcatatctgaacctcca
gaaggtattacgtttgacgacccctcgctggaggtcattctgctgttgagggttctgcac
tccatcagcagatactggttctacctcttcgataatgctgtgtgtaaggagatcattccc
actagtgagttcatcaacagtaaactgacagcaaaagcaaacagacagctgcaggatcca
cttgtgatcatgactggaaacatcccaccctggctcactgagctgggcaagacctgtccg
ttctttttcccattcgacacgaggcagatgttgttctacgtcactgcgtttgatcgtgac
cgcgccatgcagcgtctgctcgacaccaaccctgaaatcaaccagtccgattctcaggac
agccgagtagcaccacgccttgacaggaagaagcggacgataaacagggatgagctgtta
aagcaggcagaatctgtgatgcaggatctgggcagttccagagccatgctggagattcag
tatgagaatgaggtggggacaggacttggcccgacactggagttctacgctcttgtgtct
caggagctgcagagagctgatctgggtttatggcgaggagaagaggtcacccttgccaac
cctaaagggagccaggagggcaccaagtacatgttcagctctagaggcctttttgctgtg
ccttttggccgcagcaccaagccagctcacatcgccaagatcaagatgaaattccgcttt
cttggaaaactcatggctaaagccatcatggacttcagactgctggatctgcccctggga
ctgcccttttacaagtggatgttgagaaatgagtcatcaataagctctcacgatttggtg
aacatcgaccccggtgtggccaaatccatccagcacctggaggacatcattaggcagaag
aagagactagagcaggacaaatcctatacaagggagatgctacagcaggctctggagagt
ttaaatatgaatggctgttcagtggaggatttagggctggacttcacattgccagggttc
cctaacatcgagttgaagaagggaggcaaagacatcccagtcaccatacacaatctggag
gagtacctgaggttggtggtgtactggactttaaatgagggcgtgtcccgacagttcgag
tcatttagggaagggttcgagtctgttttccccctccaccacctacagtacttctaccct
gaagagttggatcagttgttgtgtggcagcaaatcagagacgtgggacgtcaaaactctg
atggaatgctgcagaccggaccacgggtacacacatgacagccgggcagtgcgattcctc
tttgaggtgttgagtagttttgatgcagagcagcagagactcttcttgcagtttgtgacc
gggagtccaagactgccagtaggaggtttccggagtttgaatcctcccctgacaattgtg
cgcaagacgtttgagtcaacggagaacccagacgacttcctgccgtcagtgatgacgtgt
gtaaactacctgaagcttccggattattccagcatcgagatcatgagggaaaaactgtta
atggcggcacgggagggccagcagtcttttcacctgtcctga
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integrated database retrieval system
