Tachysurus vachellii: 132851097
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Entry
132851097 CDS
T09596
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132851097 (chd2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132851097 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
CHDCT2
Methyltr_RsmB-F
YGR210-like_G4
Motif
Other DBs
NCBI-GeneID:
132851097
NCBI-ProteinID:
XP_060733712
LinkDB
All DBs
Position
9:13230315..13305954
Genome browser
AA seq
1785 aa
AA seq
DB search
MLKNNDKKEGDDASLKSNASSNSASEVSNHSGSESGSQSESEPGSERACSQHSESNSTSE
SESCSESGSESTGSKSRQTIAEIKEKRVKKRDLADVKKMWEEHPDVYGVRRSNRSRQEPA
RLNIGVEGSSESETESHKRKVSRPKKKENAWKDDSNDEEDGEEEASSSEIEQEEKKVRSR
RLPVRRPQPKSSSTKQHQSQKGRKQRKQETSDEDDDDDEEGDTPKRQTRRRAATKVSYKE
DQHDFETDSDDLIEMAEGTEDVQDDDSETIEKVMDARIGKKGATGVATTLYAVMANGDPM
ADFGPDKEEGETQFLIKWKGWSYIHNTWESVDSLTQQKAKGMKKLENFRKKNDELSAWLK
KASPEDLEYYNCQQELTIDLNKQFQIVERVIAMRTGKSQVPSDFPSHKTTSNKPEYLCKW
MGLPYAECTWEDGALIGIKFQSCLDSFNNRNVSKTMPSKDCKVLKQRPRFVALKKQPSYI
GDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL
LVVPLSTLTSWQREFSTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQTKRIKFNTLLTTYE
ILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELW
SLLHFLMPDKFELWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQIL
RVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKHPDEGENE
NPQEHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYLAMKRCPFQRL
DGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQA
QARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTILDNNSGN
SNSNPFNKEELAAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRESDQGSSATDEL
LSQFKVANFTMDESTPELEQKPMRNWDEIIPEDQRRQVEEEEKQKEMEDIYMLPRSRSSN
KRIQANDSDSDIGSKLKLKSHSSGSESETDESEDDKKPKRRGRPRARKNNVEGFTDAEIR
RFIKAYKKFGAPLDRLEAIARDSELVDKSIADLKRLGELVHTTCIAAVQEHEEQMKENPT
EAKGPGKRRGINIKISGVQVNAKSIIQHEEDFEPLHKAVPSNPVERSKFQLSCRLKMPHF
DVEWDVQDDTHLLLGIYEHGYGNWDQIKTDPELKLLDKILPDNPDKKPQAKQLQMRADYL
LKVLKKEQESKDVFKAEEEVKKRKPRVKKDKIRKEELVSEISSPHLSEHTSEEGEVKFQD
EKAEKNPTKKKQKKDNKENKEKQGSVKKDKEGDKDKKRTKLRKEKTKSGGKGKKAQGPVH
ITAGSDPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQHTRACLL
KIGDRITECLKAYNDPEHVKTWRRNLWIFVSKFTEFGAKKLHRLYKMAQKKRSQEEAKEH
KKKDDPTKKKLFRPEPCGSSRESIGTQPSSKSHTPQNHPTGPPSHSHHHRGDWQRERKYN
YPGNSNQPWQGDRHYPYDQHRYKEHHYSNRRAHSDLYHSCGFRNPGSARKRVYDQYSNDR
DHRVHRDYYDRHLDAKRRRSDDYRSANYHQAGGGGCYNQDFRRMPDHRGVPGHDHYRPFH
PDKPPPLLDPRSPQAQKSPLESLSPLDRTTEPTKPSPDLNWNRKT
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaacaacgacaagaaggaaggagacgacgcttcgcttaaaagcaatgcttcg
agcaactctgcatcagaggtgtcaaatcattcaggctcagagtcgggcagccagtctgag
agtgagccaggcagcgaacgtgcatgctcccagcattccgagtcgaacagcacatctgag
tctgagagctgctctgaatctggcagtgaatccactgggtcaaagtcacgtcagaccatt
gcagagatcaaagagaaacgagtcaaaaagcgagatctggccgacgtgaaaaagatgtgg
gaggaacatccagatgtttatggtgtcagaaggtccaatcggagcagacaggagcctgct
cgtctgaacattggggtagagggcagcagtgagtctgagactgaaagccacaaaagaaaa
gtttcacgaccgaaaaagaaagaaaatgcctggaaagatgactcaaatgatgaagaggat
ggtgaggaagaagccagcagttcagagattgagcaggaagagaaaaaggttcgatccaga
cgacttcccgttagaaggccacagcccaaatcatcctcaaccaagcagcatcagtctcaa
aagggacggaaacagaggaagcaggaaacatctgatgaagatgacgatgatgatgaagaa
ggggatactccaaaaagacaaacacggcgaagagcagctactaaagttagttataaggag
gaccagcatgattttgaaacagactctgatgacctgattgagatggcagagggaacagaa
gatgtgcaagatgatgacagtgagaccattgaaaaagtcatggatgccaggattggcaag
aaaggagctactggagtagccaccacactctatgcggtaatggccaacggggatcctatg
gcagattttggtcctgacaaagaggaaggtgagactcagttccttatcaaatggaagggc
tggtcctatatccacaatacatgggaaagtgtggactcactcactcagcaaaaggccaaa
gggatgaaaaaactggaaaactttaggaagaaaaatgacgagctcagtgcttggttgaaa
aaagcctcaccagaggatttggaatattacaactgccaacaagagttaactattgatctg
aacaagcagtttcagatagtagagagagtcattgctatgagaaccgggaaatcacaggtg
ccctctgattttccctctcataagaccacgtctaacaaacctgagtacttatgtaagtgg
atgggtctgccctatgcagagtgcacttgggaagatggtgccctaataggaataaagttc
cagtcttgcttagacagtttcaacaacaggaatgtctccaagactatgccctccaaagac
tgtaaggtgttaaaacagaggccaagatttgtggctctaaagaagcagccctcttatatt
ggagatgagaacctggagctgagagactaccagttagatggattaaactggcttgcacac
tcttggtgcaggtgtaacagtgttatcttagctgatgagatgggcctagggaagaccatc
cagaccatttcattcctttcctacctgttccatcaacaccagctgtatggccccttcctc
ttggttgtgcccctttccacattaacttcctggcagcgcgagttcagtacttgggctcct
gatatgaacgttgtggtctatctgggggatgttttgagcagaaagacgattcgtgattat
gaatggattcaccagcagaccaaacgaataaagttcaacacacttttgaccacatatgaa
attttattaaaggataagggtgttttgggaaacataaactgggcatttcttggggtagat
gaggctcatcggctgaagaatgacgactctctgctgtataaaacactaatagatttcagg
tcgaaccacaggctactcataacaggaacaccactgcagaattcattgaaagagttgtgg
tctctcctgcactttcttatgcctgacaagtttgagttgtgggaggattttgaagatgag
catggtaagggcagggacaatggctaccagagcttgcacaaagtgcttgagcccttcctt
ctgcgtcgtgtaaaaaaggacgtggagaaatccctgcctgccaaagtagagcagatcctc
cgtgtggacatgtccgcccagcagaaacagttctacaagtggattctcacaaggaattac
aaagccctatctaaaggcaccagaggcagttcctcaggcttcctcaacatcgtcatggag
ctgaagaaatgctgtaatcatgggttccttatcaaacacccagatgagggagaaaatgag
aatcctcaggagcacttgcaggcactggtccgtggcagtggaaagcttgtgctgttggat
aaattgctaacaagactgagagaacgaggcaatcgtgtgcttatcttttctcagatggtc
cgtatgctggatatcttggctgattatctggccatgaaacgctgtcctttccagagattg
gatggctccatcaagggagagctccggaaacaagcacttgaccacttcaatgcggagggt
tctgaggatttctgtttcctcttgtccacccgtgccggtggtctgggcattaatttggcc
tcagctgacactgtggttatctttgactctgactggaaccctcaaaatgacctgcaggcc
caggccagagctcacagaattggccagaaaaaacaagtgaatatttatcgtctggtcacg
aaaggaactgtggaggaggatattattgaaagggcaaagaagaagatggtgcttgaccat
cttgtcatacagagaatggataccactggaaggacaatactagacaacaactcgggcaat
tcaaattcaaatccgtttaacaaggaggagctggcagctatcttgaagtttggtgcagag
gatctgtttaaagaacctgaaggggaggaatcagaaccacaggaaatggacattgatgag
atcttgaggctagctgaaactagggaaagtgatcaaggttccagtgccacagatgagctc
ttgtcccagtttaaggtggctaacttcaccatggatgagagtacaccagagcttgagcag
aagcccatgcggaactgggatgagataattccagaagatcaaaggcggcaggtggaggag
gaggagaagcagaaggagatggaggacatttacatgttgccccgcagcagaagctcaaat
aaaagaatacaggcaaatgacagtgacagtgatattggctcaaagctcaaattgaagagc
cactcatcaggttcagagagtgagacagatgaaagtgaggatgataagaagcccaagcgg
agaggccggccacgtgcacgcaaaaacaatgtggagggcttcacagatgctgagattcgg
aggttcataaaagcttataagaaatttggcgctccacttgacaggttggaggccattgca
cgtgactctgaactagtggacaaatccatagcagatttaaagagactcggagagctggtg
cataccacttgcatagctgcagtacaggagcatgaagaacaaatgaaggagaaccccact
gaagctaaagggccaggaaaaaggcgtggcattaacatcaagatctctggggttcaggta
aatgctaaatccatcatccagcatgaggaagattttgagcctctgcacaaggctgtgcct
tctaatcctgttgagaggagcaaatttcagctaagctgccgtttgaagatgccacacttt
gatgtagaatgggatgtgcaggatgacacgcatctgctgttgggcatctatgagcatgga
tatggtaactgggaccagatcaaaactgatcccgagctgaaacttttggacaagattctt
ccagacaaccctgacaaaaagccacaggcaaagcagctgcaaatgagagccgattacttg
ttgaaggtcctaaagaaggaacaggagagtaaagatgtattcaaagcagaagaagaggta
aagaagagaaaacctagagtaaaaaaggacaagatccgaaaagaagaactggtcagtgaa
atctcctctcctcatctttctgaacatacttcagaggaaggtgaagtaaagttccaggat
gaaaaagctgaaaaaaaccccacaaagaagaaacagaagaaggacaacaaagagaacaaa
gagaagcagggctctgtgaagaaagacaaagagggggacaaggacaaaaaacgcacaaag
ctcaggaaagaaaagactaaatcaggagggaaaggcaagaaagctcagggccctgtgcac
attacagcaggcagtgacccagttcctattggagaggaggatgatgagctggaccaggaa
accttcagtatttgtaaagagcggatgaggcctgtcaaaaaggctcttaaacagctggat
aagcctgatgaaggtttgtcagtgcaggaacagctgcagcacacacgtgcctgcctgttg
aagattggagaccgaatcacagagtgccttaaagcctacaatgacccagaacatgtcaaa
acctggcgcagaaacctatggatctttgtgtctaaattcacggagtttggagctaagaaa
ctgcacaggctatacaaaatggctcaaaagaagcgctcccaagaggaggcgaaagagcac
aagaaaaaagatgacccaaccaaaaagaagctgtttcgtccagaaccttgtggatcgagt
cgggagtctattggcacacaaccttcatccaaatcacacacaccacaaaatcacccaaca
ggacctccatctcactcacaccaccatcggggagattggcaaagggaacgtaaatataac
tacccaggaaacagtaaccagccatggcaaggtgaccgccattacccttacgaccagcac
aggtataaagagcatcactatagcaaccggcgggcacactcagatttgtaccacagctgt
ggcttccggaacccaggctcagcccgtaagcgggtgtatgatcagtatagcaatgatcga
gaccaccgtgttcaccgtgactattacgacaggcatctagacgcgaagagaagacgctca
gatgactaccgctctgcaaactaccaccaggcaggtggtggaggatgttacaatcaggac
ttccgtagaatgcctgatcatcggggtgtcccggggcatgaccattaccggccatttcac
ccagacaaaccccctccgctgctggacccgcgctctcctcaggcacagaaatccccgctt
gagtctctctcacccctggacagaaccactgaacccacaaagcccagccctgatctaaac
tggaacagaaagacgtga
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integrated database retrieval system
