Tachysurus vachellii: 132851203
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Entry
132851203 CDS
T09596
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132851203 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
132851203 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132851203 (lsm4)
03041 Spliceosome [BR:
tvc03041
]
132851203 (lsm4)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132851203 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
132851203 (lsm4)
Spliceosome [BR:
tvc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132851203 (lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132851203
NCBI-ProteinID:
XP_060733868
UniProt:
A0AA88PAN8
LinkDB
All DBs
Position
1:complement(23189006..23192893)
Genome browser
AA seq
142 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKQQGKGRGGGAGRGVFGGRGRGMQ
GAGRGQQQDKKPGKPQGVKNQH
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactgtctttactgaaaacagcacagaaccacccgatgctggtggagctgaaa
aacggggagacgtacaacggccatctggtcagctgtgacaactggatgaacattaattta
agagaggtcatctgtacctccagggatggagacaagttctggaggatgcccgaatgctac
atcagaggaagcacgatcaagtacctgcggatcccggacgaaatcatcgacatggtgaaa
gaggaagtcgtgtccaagggccgtggccgtggcggcatgcagcagaataaacagcaggga
aagggcagaggaggtggagctggacgaggtgtgtttggtggccgaggaagaggcatgcaa
ggtgctggccgtggacaacaacaggacaaaaagccgggaaagccacagggtgtcaaaaac
cagcactga
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