Tachysurus vachellii: 132851453
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Entry
132851453 CDS
T09596
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132851453 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132851453 (dhx36)
03012 Translation factors [BR:
tvc03012
]
132851453 (dhx36)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132851453 (dhx36)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132851453 (dhx36)
Translation factors [BR:
tvc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132851453 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
TsaE
AAA_16
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
132851453
NCBI-ProteinID:
XP_060734335
LinkDB
All DBs
Position
9:complement(24771398..24801312)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSCGYGRGRGRGRRGGRGGGGERWSSDWEARDEQPRGGGGRGKHPPHLKGREIGLWYAKW
GGVKRAEAERKARAVVQMDESREQHITQLLNSVQREPSRDYGPSVPPHRQVKLEPSGHSY
FDGEGPSEELQKTVKVAKIEAVKEEDIEIKTKIKQEHVDRDLEYLVQEISRKPSLDEELK
SDLQDKRQNSKYLEMLTFREKLPSYSMREELVKLIQANLVVVVSGETGCGKTTQVTQFIL
DHYIQRGMGSLCRVVCTQPRRISAISVAERVAAERAESVGEGKSCGYQIRLQSRLPRKQG
SVLYCTTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLLTIVKDLLRYRDDLRVVLM
SATLNADKFSEYFDHCPMIHIPGHTFPVKEYLLEDVVEMLRFRPQQQDRRPRFRRGFMSG
QNVRPEKQEKESEYKESWPCFARTLRDRFSDSTISTLEMMDEDDKINLELIVALIRHIVL
NEDDGAILVFLPGWDNISSLNDLLLADQMFKSDQFVIIPLHSLMPTVNQTQVFKRPPPGV
RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRKGRAG
RVSPGKCYHLYNSLRASLLDSYQLPEIQRTPLEELCLQIKILKLGPIASFLRKTLDPPSD
RAIELAITHLMDLNALDRNEELTPLGFHLARLPVEPHIGKMILFGALLACLDPVLIIAAS
LSFKDPFSIPLGKEKIADQRRKVLSKNTKSDHLTVVNAFRGWEEAKRRGYRCEREYCWDN
FLSANTLQMLQNMKGQFAEHLLAAGFVSSKDPKHPGANINSENEKLLKAVIVAGLYPKVA
KIRPSHHKKRPIPAKVYTKADGKVCIHPKSVNSEESQFHYTWLIYHLKMRTTSIFLYDCT
EVSPFSLLFFGGDISIQKDQEQETIAVDEWIVFQSPARIANLVKSLKKELDLLLEEKIKR
PRPVDWSDRTSKDCAVISAIIDLITTQESATSSHEPYWKSRQSWD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtggctacgggagagggagaggaagaggaaggagaggaggaagaggaggagga
ggagaacggtggagctccgactgggaagcccgggatgagcagcctcgaggcggcggaggt
cgagggaaacacccgccgcacctgaagggcagagagatcggactgtggtacgccaagtgg
gggggagtgaagcgtgcagaggccgagaggaaggcgagagccgtagtgcagatggacgag
tcgagagagcagcacatcacacaactactgaactcggtccagagagaaccgtctcgtgac
tacgggccgtccgtccctccgcatcggcaggtgaagctggaaccgagcggccacagctac
ttcgatggtgaaggcccttcagaagagctgcagaaaacggtgaaagtggctaaaatcgag
gcggtgaaggaagaggacatagagataaagactaagataaagcaggagcacgtcgatcga
gatctggagtacctggtgcaggagatcagtcgaaagccttcgctggatgaagagctgaaa
agtgaccttcaggacaaaagacagaattcaaaatatctggaaatgctgacatttcgagag
aagctgccttcctacagcatgagagaggagttggtgaagctgattcaggccaatctggtg
gtggtggtgagcggagaaactggctgtggcaaaaccacgcaggtgactcagttcatcctg
gaccactacatccagcgtggcatgggctcgctctgcagggtggtgtgcacacagccgcga
cgcatcagcgccatctcggttgccgagagggtggcggcagagagggcggagtctgtggga
gagggaaagtcctgcggatatcagatccgtctgcagagccggttgccacggaaacaaggc
tcggtgctgtattgtacgacgggaattattcttcagtggctgcgctcggatccgtgttta
tccagcatcagtcatctggttctagatgagatccacgagcgcagtctgcactcagacgtc
ctcctcaccatcgtgaaggatctcctgaggtacagagacgacctcagggtcgtgctcatg
agcgccacgctcaatgccgacaagttcagcgagtacttcgatcactgccccatgatccac
atcccgggtcacacctttcctgtgaaggagtacctgctggaggacgtggtggagatgctc
aggttccggccgcagcagcaggatcgacgtccacgcttcaggagaggattcatgagcgga
cagaacgtacggcccgagaagcaggagaaagaatcagagtacaaggagagctggccgtgt
ttcgctcgcacgctcagagacaggttctctgacagcaccatcagcaccctggagatgatg
gacgaggacgacaagatcaacctggagctgatcgtagcgctcatccgccacatagtgctg
aacgaagacgatggagccatcttggtgttcctgcctggctgggacaacatcagcagcctg
aatgacctgctcctggctgaccagatgtttaaatctgaccagtttgtgatcattccactg
cactccctgatgcccacagtcaaccagacacaggtttttaaaaggccacctcctggtgtc
cggaagatcgtgattgcaactaacatagcagaaaccagtatcactatagatgacgtggtg
tatgtgatcgatggagggaaaattaaggaaactcacttcgacacacagaacaacatcagt
acaatgacggcagagtgggtgagtctcgccaacgccaagcagaggaaggggcgcgctggc
agggtgtctccaggtaaatgctaccacctgtataacagcctgagggcgagtcttctggac
agctaccagctccctgagatccagcgcacaccgctcgaggagctttgcctgcagattaag
atcctgaaattgggtccaatcgcatcattcctcagaaagactctggacccaccgtcagac
agagccatcgagctggctatcactcacttaatggatctgaatgcattggaccggaacgag
gagttgactccgctgggttttcacctggcccgtttacctgtggagccacacatcggaaag
atgatcctgtttggagcgctgctcgcctgcctggaccctgtgctaatcatagcagctagc
cttagctttaaagacccgttctccataccactggggaaggaaaaaatagctgaccagaga
agaaaagtcctgtccaaaaacaccaagagtgaccacctgactgtagtcaacgccttccgg
ggctgggaggaagccaagcggcgtggttacaggtgcgagcgggaatactgctgggacaac
ttcctgtctgccaacacgctgcagatgttacagaacatgaaaggccagtttgcagagcat
ctcttggccgctggatttgtgagcagtaaagacccgaaacatcccggcgccaacatcaac
tcggaaaacgagaagctgttgaaggctgtgattgtggctggtttgtaccccaaagtggcc
aagattcgcccgagccaccacaagaagagacccataccagcaaaggtgtacaccaaagct
gatgggaaggtctgtatacatcctaaatctgtcaactccgaggagtcgcagttccactac
acctggctcatctatcacttaaagatgcgaaccaccagtatcttcctgtatgactgcact
gaggtgtctccgttctctctgctcttctttggtggtgatatctccatccagaaggatcag
gagcaggagaccatcgcagtggacgaatggatcgtcttccagtctcctgctcgcatcgct
aacctggtcaagagcctgaagaaggagctggatctgctgctggaggagaaaatcaagcga
ccgcgtcccgtagactggagcgaccgaacctccaaagactgtgccgtgatctcggccatc
atcgacctcatcaccactcaggagagcgccacgtcttcacacgagccgtattggaaaagc
cgccagagctgggactag
DBGET
integrated database retrieval system
