KEGG   Tachysurus vachellii: 132851539
Entry
132851539         CDS       T09596                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
tvc  Tachysurus vachellii
Pathway
tvc03082  ATP-dependent chromatin remodeling
tvc03083  Polycomb repressive complex
tvc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132851539 (rbb4l)
   03083 Polycomb repressive complex
    132851539 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    132851539 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvc03036]
    132851539 (rbb4l)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     132851539 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     132851539 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     132851539 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     132851539 (rbb4l)
    PRC2.2
     132851539 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     132851539 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    132851539 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    132851539 (rbb4l)
   NuRF complex
    132851539 (rbb4l)
   NuRF complex (fruit fly)
    132851539 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 132851539
NCBI-ProteinID: XP_060734474
LinkDB
Position
1:23630113..23638162
AA seq 425 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRQEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIIDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASEL
ESQAS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcagacaaagaagtgtatgatgatgccgtagaggagcgggtaataaatgaagaatac
aaaatatggaagaaaaacacgccttttctctacgacctggtcatgacacatgcgctcgaa
tggccaagtttaacggtgcagtggttgcctgatgtgagcaggcaggagggaaaggattat
gcagttcacagactggtgctgggaacacacacttcagatgagcagaaccacctggtcatt
gccagtgttcagattcccaatgatgatgctcagttcgatgcttctcactacgacagcgaa
aaaggagagtttggcggatttgggtctgtgagcggaaagattgagatcgagatcaagatc
aatcatgagggtgaggtgaaccgggcgaggtacatgccacagaacccctgcataattgcc
accaagactcctacatctgatgtgctagtctttgactacactaaacacccatccaaacca
gaccctagcggtgagtgcagtccagacctgagactgagaggtcatcagaaggaaggatac
ggtctttcctggaaccccaacctgagcggaaacttgctcagtgcatcagacgatcataca
atctgtttatgggatatcagtggatctcctaaggaaggaaagattatagatgccaagacc
atcttcacaggccacactgcagtagtggaggacgtgtcctggcaccttctgcacgagtcg
cttttcggctctgttgccgacgaccagaaacttatgatctgggacacaagatccaacaac
acggctaagcccagtcactcagtggacgctcacactgctgaagtcaactgcttgtccttt
aatccctacagcgagttcatcctagccaccggatctgcagataagactgtggctttgtgg
gatttgcgcaacctgaagctgaagcttcactcctttgagtcacacaaggacgaaatattc
caggttcagtggtcccctcataatgagacgatcctggcctccagtggaacagacaggcga
ctcaacgtctgggacctgagtaaaatcggagaggaacagtctgctgaggatgctgaagat
ggacctccagaactgttgtttattcacggcggccacacagcgaagatttctgatttctcc
tggaatcccaacgagccctgggtgatctgctctgtatccgaagataacattatgcaagtt
tggcaaatggccgaaaacatctacaatgacgaggagccagacactcctgcctcagagctt
gagagccaggcctcataa

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