Tachysurus vachellii: 132851688
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Entry
132851688 CDS
T09596
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvc03016
]
132851688 (tsen34)
Enzymes [BR:
tvc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
132851688 (tsen34)
Transfer RNA biogenesis [BR:
tvc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
132851688 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
132851688
NCBI-ProteinID:
XP_060734655
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All DBs
Position
9:22317674..22320549
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AA seq
321 aa
AA seq
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MDWNGTEQSTQSDDQHTESSECVDARNTSDADKAENQVVNISLCGSTPLLWRASDIRLCR
EEVGVIGNLVGSLARQPRQNVRLGRPLEILQEEAQLLVETGKATTVRHKELYENKESRSK
AFGLYKARLEQSYKEQRALALEDKKAVLQRVMEEKQNDYKGNEGAEQAVRERLESLEKSF
SFPRSAMAVQLCTARAGFSHCPEEHAFLAAEWPMPRDKHSETRFQVYKDLRRKGFYLTAA
GKFGGDYLVYPGDPLRFHAHFIALCLPMDEKLPVYDLLAIARLGSNVKKTVLLCSPQYSR
DRVEETEVEVVYSSLQWSGIV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggactggaatgggacagaacagagcacccagtctgatgaccaacacacagaaagcagt
gaatgtgtggacgcgagaaatacaagtgatgcagacaaagctgagaatcaggttgttaac
ataagcctctgcggatctacgcctttgctgtggagggcctccgacattagattgtgtagg
gaagaagtcggtgtgattgggaatcttgtggggtctctggccagacagccaaggcagaat
gtcagactgggaagaccactggaaatcctgcaggaagaggctcagctgctggtggagact
ggaaaggcgactactgtgcgacataaagagttgtatgaaaataaagaaagtcgttcaaag
gcatttgggttgtacaaggccagactggagcagagttataaggagcagcgtgcccttgcc
ctggaggacaagaaggctgtgctgcaaagagtaatggaggagaaacagaatgattataag
ggaaatgagggagcagaacaggcagtaagagaacgacttgaatctttggagaagagtttc
tcattccctcgttctgccatggctgtccaactctgcaccgctcgtgccggcttcagtcat
tgtcccgaggaacatgctttcttggctgctgaatggccaatgcctagagataagcactca
gagacaaggttccaggtttataaggatcttaggaggaaaggtttctacctgactgcagca
gggaagtttgggggagattatctcgtgtatccaggtgatccactccgttttcacgcccac
ttcattgccctgtgtttgcctatggatgaaaagttaccagtctatgatcttcttgctata
gcaagacttggatccaatgtaaagaaaacagtgctactttgttcaccacagtattccagg
gacagagtagaggaaacagaagtggaggttgtgtattcatctctgcagtggagtggaata
gtatag
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