Tachysurus vachellii: 132851933
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Entry
132851933 CDS
T09596
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132851933 (nrde2)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132851933 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
TPR_2
TPR_12
HGTP_anticodon2
LRIF1
Motif
Other DBs
NCBI-GeneID:
132851933
NCBI-ProteinID:
XP_060734896
LinkDB
All DBs
Position
10:complement(28080813..28093976)
Genome browser
AA seq
1090 aa
AA seq
DB search
MALFPAFNGVTDADISKNSGLEWLQNCSFSSVDALSLHQHTTHRDTAERHTPHHTHTSEE
TSDEDNDDGYVDVKKKRRKKEKKKRRKKQKKRSRDDSVNSNSDTIYPSDLLNRELEPSQR
QEDLANVGGVLWLDDLQCPNEKLFYLDRKSDPVNWEYKSLYRAHIARYKRKGRSALGLDS
RIQGVSWEDSGPERKRKEKREERYFSPTNRRLLSSETPPTLSVPPTDSDLSIDPASFIPL
PPCKEESDSAPQTSTSTDPLRVYDLATSLWLEGKGQPDVKVQVQPPPSDMLMTRVEDFNK
QLRENPSDVKMWLEFIQFQDELGSSLSGQGAESERALLDRKLSVVERALQLNPGCVELKL
HRLTLGRGLWDGPTQLKEWKKVVFIHPNSASLWKSYIQFTQSQFSSFSVPMVTSVYRKCL
STLSAVQDGQLLSHPPLPGTEHHLLDVFVRQCHFLRQAGHSEKAVCLFQALIEFTFFKPD
SVRHLNTKQQVEFFETFYDSGEPRLGESGARGWGTWMKQQERGGWIQTPDTEEEDEIDDE
DEIKDKSQPRWRIWLNVESWREANHWLPWRPDRTKGQPEEECEDPDRQVVFDDIGPSLIR
VELPELRLRLLLSFLHFLGVPIGSASSLSSLIVDDSTLLDDSALLDETLDLERPLTSHDL
PVTGVSAVGHMTSRCDSRRKTVGLYKLGEDFVRNVLEKTLPLFPAQDRRALTLCWMQYEK
LKVLRCVHSGSKKSIRVQGKCTKRLLKHLLKQQENRCSLLLWREYGHVEWLLGNIDEARR
VFDSALSLGGASGLRDSALCHLCLLYAQLEMEQMCLRGAQSVKTTPVSVTSSRAVYILTT
LSEDATYRPFTGEISPMAILKARKAYEHSISEGRSYENAYGLIGCFGLFQYLTVGVDAAD
SVFTEARKYIKCTKQLEAVCVLHVTLLHHHSRIRAFPLRRVRSVLNDALTLLPHSTSLWR
MHLQVDTCYYNAANTRRFLHTITKRNQSILPRLFTLTTEQQRKKRIDAVLRSGLPDSSLP
MFPEIGLCNRIRSLFEVAVASEPGAHCPLLWRCYINFVVCDGDVERGRGIFYRALQHVPW
VKVLYMDAVS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcgttatttcctgcatttaatggagtgacagatgctgatatttctaaaaactcaggt
ctagaatggctccaaaattgtagtttcagcagcgtggatgctttgtctctacaccaacac
accacccacagggacacagcggagagacacactccacaccacacacacaccagtgaggag
acatctgatgaagacaacgatgatggttatgttgatgtcaagaagaaaaggagaaagaaa
gagaaaaagaaaaggagaaagaagcagaagaagcgcagcagagacgattcagtgaacagc
aactcagacacaatttaccccagtgaccttctgaaccgagaactggaaccatcacagaga
caggaggacttggctaatgtgggtggagttttgtggcttgatgatcttcagtgtcccaat
gagaagctgttctacttggacaggaagtctgaccctgtgaactgggagtacaaatcactg
tacagagctcacattgccaggtataagcggaagggcaggtctgctcttggattggacagc
aggattcagggcgtgtcctgggaagactccggcccagaaaggaaacggaaagaaaagaga
gaggaacgttatttctctcccaccaaccgccgtcttctcagctctgaaactccacccact
ctctcagtccctcccactgattctgacctatctattgatcctgcttcatttatccccctc
cccccctgtaaggaagagtctgactccgcccctcagaccagcaccagcactgatccactt
cgagtgtatgaccttgcaacctcactgtggctggagggaaaaggtcaaccagatgtcaaa
gttcaggtgcagccgcctccatcagacatgttaatgacacgagtggaggactttaacaag
caactgagggaaaaccccagtgatgtaaaaatgtggctggagttcatacagtttcaggac
gagttgggcagctccctctcggggcagggggcggagtctgagcgtgcactgttggacagg
aagttgagtgtggtggagcgtgctcttcagctgaaccccggctgtgtggagttgaagctg
cacagactcaccctgggcaggggattgtgggatggcccaacacagctgaaggagtggaag
aaggtggtgttcatccacccgaacagtgcctccctgtggaaaagctacatccagttcacc
cagagccagttcagctccttttctgtccccatggtgaccagtgtatacaggaagtgtctg
agcaccctcagtgcggtacaggatggacagctgttgtctcacccaccgctgccagggaca
gaacaccacctgctggacgtgtttgtgagacagtgccacttcctacgtcaggcgggtcac
tctgagaaagctgtgtgtcttttccaggctctgattgagttcaccttcttcaaacctgac
agtgttagacacctaaacactaaacaacaggtggagttctttgagacattctatgacagc
ggagagccaaggttgggggagagtggtgccagagggtggggaacctggatgaagcagcag
gagagaggaggatggatacaaacacctgatacagaggaggaggatgaaatagatgatgaa
gatgagattaaagataaatcccagccgaggtggagaatctggctcaatgttgagtcatgg
cgggaagccaaccattggttaccatggagaccagacagaactaagggccaaccagaggag
gaatgtgaggatccagatagacaggtggtgtttgatgatatcggaccatctctgatccga
gttgagttgccagaactgcgtctgcgtctcctgctctctttccttcactttctgggcgtg
cccattggctctgcttcttctttgtccagccttattgtggatgactccaccctcctggat
gactccgccctgttggacgagactcttgaccttgagagacctttgacctcccatgacctc
ccagtgactggagtcagtgctgtgggtcacatgacctctcgatgtgactctaggaggaag
acagtggggttatataaactgggggaggattttgtcaggaatgttctggaaaagaccctc
ccactgtttccagctcaggacagaagagcactcactctctgctggatgcaatacgaaaaa
ctcaaggtgctgcggtgtgtgcatagtggcagtaagaagagtattagggtgcaggggaag
tgcactaagcgtttattgaagcatttactgaagcagcaggagaatcgttgctctttgttg
ctgtggcgtgagtacggccatgttgaatggttgttaggaaacatagatgaagcacgcagg
gtttttgactccgccctctcgttgggtggagcatctggcttacgtgactccgccctctgc
cacctctgcctgctgtatgcacaattagaaatggaacagatgtgtctgcgtggggctcag
agtgtaaagaccacacctgtttctgtcacctcctctcgggcagtgtacatactgactaca
ttatcagaggatgccacctataggccttttacaggagagatcagccccatggccatacta
aaggcacgcaaagcgtacgaacattccatctcagagggaaggtcatatgagaatgcctat
ggactgattggctgttttggtctgttccagtatttaacggtgggggtcgatgcggccgac
tcagtgttcactgaggccagaaagtatattaagtgcactaagcagcttgaggccgtgtgt
gttttgcatgtgacactgttacatcatcactcacgcatcagggcgtttcctttgaggcgt
gtgaggtccgtgctgaatgatgcgctcaccctgctgccccacagcacatccctttggagg
atgcacctacaggtcgacacctgctactacaatgctgccaacacccgacggttcctacac
accataactaaacgcaaccagagcatcctgcctcgactgttcaccttaacaactgaacag
cagaggaaaaaacggatagatgctgtgctacggtcagggctcccagacagttctcttcct
atgtttccagagatcggcctttgcaaccgtatccgctctctgtttgaggttgccgtggcc
tcagagcctggtgctcactgccctctgctgtggagatgctacatcaactttgtggtgtgt
gatggggatgttgagagaggaagaggaatcttctacagagccctacagcatgtcccctgg
gtgaaagttctgtacatggatgctgttagc
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