KEGG   Tachysurus vachellii: 132852341
Entry
132852341         CDS       T09596                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132852341 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvc03041]
    132852341 (cdc5l)
   03400 DNA repair and recombination proteins [BR:tvc03400]
    132852341 (cdc5l)
Spliceosome [BR:tvc03041]
 Complex B
  Other components
   Prp19 complex
    132852341 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    132852341 (cdc5l)
DNA repair and recombination proteins [BR:tvc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    132852341 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Glyco_hydro_52 DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 132852341
NCBI-ProteinID: XP_060735473
LinkDB
Position
10:12454152..12463434
AA seq 807 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEDTNDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEVPFEKKPAPGFYDTSMEQYDPHEPDFK
RLRQQHLDGELRNEKEERERKKDKQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPQTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGS
EGLTPHSGMTPKPSIGVTPGRTPLRDKLNINTEDGVVDYTDPSYAKHLQRESREQLKLGL
LSLPLPKNDFEIVLPENAEREMEEPEVDESFVEDAADIELRKQAAREAEREKELRQRHTA
VQKSLPRPSEVNETILRPQNVEPPLTEVQQAEELIKKEMITMIHYDSLHHPYTDMLAKKA
KGAGSGSTNAEHVSYLEKTPYDKVAEEDLKKAKEILRQEMEVVKHGMGHGDLSIDAYNQV
WEECYSQVLYLPGQNRYTRANLASKKDRIESLEKKLEINRGHMTTEAKRAAKMEKKMKVL
LGGYQSRAMGLIKQLSDLWDQVEQAHMELHTFQELKKQEDLAIPRRQEALREDVQRQQER
EKELQQRFADLLLEKETLHQRSSSEKF
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgattaaaggtggcgtttggcgcaacaccgaggatgagattcttaaa
gcagctgtgatgaaatatggcaaaaatcagtggtctcgtattgcatctctgctgcataga
aagtcagccaaacaatgtaaagcaagatggtatgaatggctggatcccagcataaagaaa
acagaatggtcacgtgaagaagaggagaagctccttcatttggccaaactgatgcccacc
cagtggagaacaatagctcccatcatcggcagaactgcagcacagtgcctggagcactat
gagtatcttctagacaaagctgcccaaagagacaacgaagaagacacaaacgatgatcct
cgcaaacttaagccaggagagattgacccaaaccctgaaacaaaaccagccaggccagac
cctgtggacatggatgaagatgagttggagatgctgtctgaggccagagcaaggttagca
aacacacaaggaaaaaaggccaagcggaaagccagggagaagcagctagaggaggcgagg
cgcttggcagccctgcagaagcgcagagagttgcgtgctgcaggcatagatattcagaag
aagcgcaagaaaaaacgaggtgtagactataatgcagaggttccctttgaaaaaaagcct
gctccaggattttacgatacttctatggaacagtacgatccacatgagcccgacttcaaa
agacttcgccagcagcatcttgacggagagctgagaaatgaaaaagaagagcgggagcgt
aaaaaggataaacagaagatcaagaagaagaaagagtcagacctcccatctgccattttg
cagactagtggggtgtccgagttcaccaaaaagaggagcaagctagtgctgcctgcacca
cagatatcagatgctgaactagaggaggtggtgaaactcggtcaggccagtgaaatcgct
cgccagactgccgaagagtctggaatcacaaactctgcttccagtgctttgctttctgag
tacaatgtcaccaataacagcatggccctgcgcacaccccagactcctgcagcacaggac
aagatcctacaggaagcccagaatctgatggcacttactaatgtggacacccctctgaag
ggtggtctaaacacacctttgcatgagagtgacttctctggggtcaccccccagaggcag
gtggtccagactcccaacactgtgctctctacacccttcagaacaccaagtcatggttca
gagggtttgacgcctcacagtggcatgaccccaaagccttcaataggagtgacccctggt
cgcacacccctgcgggacaagctcaacatcaatactgaggatggtgtagtggattacaca
gatccatcttatgccaaacacctgcaacgggagtctcgtgagcagctgaagttggggcta
ttgtctcttccacttcccaagaacgactttgagattgtgttgcctgagaacgctgagaga
gagatggaagagccagaggtcgacgagagctttgtggaggacgcagctgatattgagcta
cgtaaacaggcagcaagagaagctgagcgtgagaaagagctgagacagagacacacagca
gtccagaagagtttacctaggccctcagaggtaaatgagaccattctgaggcctcagaat
gtggagcctcctctcacagaggtgcagcaggcagaagagctcataaagaaagagatgatc
accatgatccactatgacagcctgcaccacccatacacagacatgctggctaagaaagct
aaaggagcaggctctggttctaccaatgcagagcacgttagttacctggagaaaacaccg
tacgataaagtagcagaagaggacctcaaaaaggcaaaagagatactgaggcaggagatg
gaggttgtgaagcatggcatgggacatggcgatctttccattgacgcttataaccaagtt
tgggaggagtgttacagccaggttctgtacctgcctggacagaaccgatacaccagagcc
aatctggccagcaaaaaggacaggattgagtctctggaaaagaaactggagattaacaga
gggcacatgacaaccgaggctaaacgggcagctaagatggagaagaagatgaaggttctt
ttaggaggatatcagtctcgggccatgggtttgataaagcagctcagtgacctgtgggat
caggtggagcaggcccacatggagttgcacaccttccaggagctgaagaagcaggaggat
ctggccatcccacgcagacaggaggctctgagagaagatgtgcaaaggcaacaggaaaga
gagaaggagctccagcagaggtttgctgatcttctccttgagaaggaaactttgcatcag
agaagttcttcggagaagttctga

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