Tachysurus vachellii: 132852426
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Entry
132852426 CDS
T09596
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132852426 (vsx1)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
132852426 (vsx1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
132852426
NCBI-ProteinID:
XP_060735629
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All DBs
Position
10:complement(4999695..5004423)
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AA seq
358 aa
AA seq
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MTGREKVEEKPHSKVLTTPTYFGADKSRVSGAGFRSKGFAITDLLGLEPDFRARQPGTVE
VSGQHQGVDVGHGTRAGGFSLPAGSLPLGLGFLCSLAAQQPPGAPCFLPGHIPLLQSRTD
RHFNHNTEPQRPDVYSDDDCLSGDHNEEKSSSNSQKRKKRRHRTVFTSHQLEELEKAFNE
AHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHS
IPLPESILNSAKNGMMGSCAPWLLGEAFCSPYSGMHKKSMEMSKKSPERTASTHSDPYHE
EIKGKDGDATWTRRGSVTDELEDMAIDLSNTSKQEGKITALKVSSSHPEASIHSENKN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacgagagaaagtagaggaaaagccgcacagtaaagtcttaacgacaccgact
tatttcggtgcggacaagtcgcgcgtcagcggcgccggatttcggtccaaaggctttgcc
atcaccgacttgctgggcctcgaaccggacttccgggcgcgtcagcccggtactgtagaa
gtcagcggacagcaccagggcgttgatgtgggtcacggcacaagggccgggggcttctcg
ttgcccgcagggtcattgccactcggtttaggtttcctctgcagtctggcggcgcagcag
cctcccggtgccccgtgtttcctcccgggacacatcccacttctgcagtcccggacagac
aggcatttcaaccataacaccgagccacagcggccagacgtctattccgatgatgactgt
ctttctggggatcataacgaagagaaaagctcaagcaactctcagaaacgaaagaaacga
agacacaggacggtgtttacttctcaccagctggaagaactagagaaggctttcaacgag
gctcattatccagatgtttacgcaagggaaatgctggccatgaagacagagctccctgaa
gacaggatacaggtgtggttccagaaccgacgggccaaatggaggaagagggagaagtgc
tgggggcgcagcagtgtgatggccgaatacggcctgtacggcgccatggtgcgtcattcc
atccctttaccagaatccatcctcaactcggccaaaaacggcatgatgggctcctgcgct
ccctggcttctgggtgaagcattttgttctccttattcaggaatgcataaaaagtccatg
gaaatgtccaagaagtcgccggagaggactgcgtccacacactccgatccataccacgag
gagataaaagggaaagacggagacgccacgtggacgagacgaggctcagtgacagacgag
ttggaggatatggccatcgatttatccaacacatccaaacaggaaggcaagatcactgct
ttgaaagtctcgtcttctcatcctgaagccagcatccactcggaaaacaagaactga
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