Tachysurus vachellii: 132852566
Help
Entry
132852566 CDS
T09596
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132852566 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132852566 (capn3a)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
132852566 (capn3a)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C2: calpain family
132852566 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
132852566
NCBI-ProteinID:
XP_060735810
LinkDB
All DBs
Position
10:complement(15343890..15354163)
Genome browser
AA seq
714 aa
AA seq
DB search
MPYTPSGFICDRLIRERERKDGEGSVNKPLRFSGQDFNTLKQDCLQKKVLFEDDTFPATV
DSLGYKELGHKSSKVKNIVWKRPKDICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVVPQEQSFSDNYAGIFHFQFWRYGDWVDVVVDDRIPTINNELVFTKSAERNE
FWSVLLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKELYKIMKKALDRG
SLMGCSIDALVPARLETRTVTGLVKGHAYSVTAVGECKQSVKKKSKVHLVRLRNPWGQVE
WNGPWSDNSNEWESISKEDKEKLHLQNAEDGEFWMSFDDFMKNYTKIEICNMTPDALDDD
KLHKWTVSVNEGRWVRGCSAGGCRNYLDTFWTNPQYRLRLLEEDDDQDNNEVACSFVVAL
MQKNRRKERKLGGNLFTIGFSIYEVPKEMQGNKQHMQKEFFLLNASKARCKAYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNVSEEIENRIAADHPVPAPASAGEET
EEDQQLRTIFQQIAGDEMEISANNLRNVLNRVLADSYRDMNKEVFSLESCRSMIAFMDMA
GTGRLNLQEFKQLWNKIKKWQETFKHYEAEQTGFISSYDMRNAINDAGFHLNNPLYNIIT
MRYANENMNIDFDSFVSCLVRLEGMFRAFQAFDQDGDGTISLSVLEWLQLTLYA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccatcagggtttatttgtgaccggctaatccgggaaagagagagaaag
gatggagaaggatctgtgaacaaacctcttcggttcagtggccaggattttaacaccctg
aaacaggattgtcttcagaaaaaggtgctatttgaagatgatacattcccagccactgtg
gactctctggggtacaaggaacttggccacaagtccagcaaagtcaagaacattgtctgg
aaaagacccaaggatatttgtgataatccacagttcattgttggaggtgccagcagaaca
gacatctgtcagggagacttaggagactgctggctgctcgctgccattgcttgtcttaca
ctgaacgataagctactgtatcgggttgttcctcaagagcagagtttttctgacaattat
gcgggaatctttcatttccagttctggcgttacggtgactgggtggatgttgttgttgat
gatcggatccctaccatcaataacgagctagtgttcaccaagtctgctgagaggaatgag
ttctggagcgttcttcttgagaaagcatatgccaaactgcacggttcctacgaggctctg
aaaggtggaaatactgccgaggggatggaagacttcactggaggagtgactgagttctat
gaaatgaaggaggcacctaaagaactttacaagatcatgaagaaagccttagaccgaggc
tccctcatgggttgctctattgacgctttggtcccagcacgtctggagactcgcacagtg
actgggctagtgaaaggtcatgcctactctgtaactgctgtgggtgagtgtaaacagagt
gtaaaaaaaaaatctaaagtgcatctggtgcgtcttcgtaatccatggggccaagtggag
tggaacggaccttggagtgataactcaaatgagtgggaaagcatctctaaggaagataaa
gaaaaactgcatctacagaatgcagaagatggagagttctggatgtcttttgatgatttc
atgaaaaactacaccaagatagaaatctgtaatatgactcctgatgcactggatgatgat
aagctgcacaagtggacagtgtctgtgaatgagggtcgctgggtaagaggctgctctgct
ggaggctgcaggaattatttggacaccttctggacaaacccacagtaccgccttcgtctt
ctggaggaggatgatgaccaggacaacaatgaggtggcctgctcctttgtggtggctctc
atgcagaaaaacagaagaaaagaacgaaaactgggtggcaatttattcactattggattt
tccatctatgaggtgccgaaggagatgcagggtaacaagcagcatatgcagaaggaattc
tttctactgaacgcatccaaggctcgctgcaaggcctacattaacctgagggaggtgacg
caacgcttcaggctgagccctggggagtatgtcattgtgccttccacctatgagccccac
caggaaggcgagtttctcctccgtgtcttctctgaaaagaagaacgtctctgaggaaata
gagaacaggattgcagctgaccatccagtgccggctccagcctcagcaggggaagagact
gaggaggaccagcagttacgcaccatttttcagcagatagctggggatgaaatggagatc
tcggctaacaatctgagaaacgtcctgaacagagtgttggctgatagctacagggacatg
aataaagaggtgttcagtttagagagctgccgtagtatgatagccttcatggacatggct
ggaacaggcagacttaatctacaagagtttaaacagttgtggaataagatcaaaaagtgg
caggaaacctttaagcattatgaagctgagcagactggcttcatcagcagctacgacatg
aggaacgccatcaatgatgctgggttccatctcaacaacccactgtacaacatcatcaca
atgcgttacgccaatgagaacatgaacatcgactttgacagctttgtcagctgtcttgtt
cgtttggaggggatgttcagagctttccaggcttttgatcaggatggagatggcactatc
agcctgtctgtactggagtggctccagttgactctgtatgcctaa
DBGET
integrated database retrieval system
