Tachysurus vachellii: 132852593
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Entry
132852593 CDS
T09596
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132852593 (msh4)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
132852593 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
132852593
NCBI-ProteinID:
XP_060735853
LinkDB
All DBs
Position
10:complement(15821060..15831826)
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AA seq
794 aa
AA seq
DB search
MTSSSSASVCHAASVIVAVVEGRGLARGEIGMASINTRSPELVLSQFADTGTYAKVITKL
HILVPLEILMPDTASEKGQGTKLYNLITENFSSVAFTAIQRKYFNERKGLEYIQQLCAAE
FNTVLMDVQTKYYCLAAVAALLKYYEFIQNSVYAPKSLKVSFTGSEQTAMIDAVSARNLE
LVINNRGHRSEHTLLEVLNYTKTPGGERRLRSNILEPLLDVDTINTRLDTIQELLQSEEL
FFGLKGAITQFLDIDQLLSALVQLPKQETVEVAEAKIMHVIQLKHTLELIEPVKIVLKDA
KTALLKAYYTSLDDSRFNSILDQIKTVINNDTSYMKGSLNMRTQKCYAVRPNVNELLDIA
RRAYTEVVDDIAGLVEQLGQKYGLPLRTSFNTTRGFFIQMRLEGFGLPDGQLPGEFIKVT
RQKNNYSFTTLDLMKMNDRCDEALKEIFHMSYIVICRLLNEVYKHIHCLYKLSDAVSMLD
MLLSLANVCTISDYVRPEFTDTLAIKQGRHPILERIAGQQPIPNNSHISEGNNFVIITGP
NMSGKSTYLKQVALCQIMAQIGSFVPAEFASFRVADQIFTRIGVDDDFETSSSTFMVEMK
EVSYIIHNASNRSLIIIDELGRGTSAEEGIGICHSVCEFLIGLKAFTLFATHFLELCQLE
TLYPNVENQHMQVQHMRGTENGSESVVYTYLLTQGFSEESNYGIRAAENTSLPLSIIQEA
KSISSKVSLKLWAKHHSDPTTLRQGAVFRLATRLIQTARNSRLDPDSLRLYLKGLKRRHE
AEIKDRLVSIETEE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttcctcatctgcatctgtgtgtcatgctgcatctgtaatcgtggctgtggtg
gagggccggggtttagccaggggagagatcggcatggccagcatcaacaccaggtctcct
gagttggtactctcacagtttgcagatactgggacttatgccaaggtaattaccaaactg
catatcttagtgcctcttgagattctgatgccagacactgcaagcgagaaaggacaagga
accaagctctacaacctcatcacggagaacttttcgtctgtagctttcactgccattcaa
aggaagtactttaatgagaggaaaggactggagtacattcagcagctctgtgcagccgag
ttcaacactgttcttatggatgtacaaaccaagtattattgtctggcggctgtagcagct
ctccttaagtactatgagttcattcagaactctgtgtatgctcccaaatctctaaaagtg
agcttcaccggcagtgagcagactgccatgattgatgcagtctcagccaggaacttggag
cttgtgattaacaacaggggccacaggagtgaacacactctgcttgaggttttaaactac
accaaaacacctggtggtgagaggaggcttcgctcaaacattctggaacctctgttagat
gttgacaccattaacacaagactggacaccatacaggaactgctacagagtgaggaactc
ttctttggtctcaagggtgcaattacacaattcttggatatagatcaactgctttctgct
cttgtgcagcttcccaagcaagagacggttgaagtggctgaagcgaagataatgcatgtc
attcagctgaaacacacactagagctgattgaaccagtcaagattgtgttgaaggatgca
aagacagccttactgaaagcttattacacttcactagatgatagcaggtttaacagcatc
ttggatcaaatcaaaacagtgataaacaatgataccagctatatgaagggaagtctgaat
atgcgcacacagaagtgctatgctgtgcggcctaacgtcaatgaattgctagatattgca
cgccgcgcctacactgaggtagtggatgatatagcaggattagtagagcagctaggacag
aaatatggtcttccacttcgtactagttttaacacaacccgaggtttcttcatccagatg
aggctggagggatttggcttgcccgatggacagcttccaggagagttcatcaaagtaact
agacaaaaaaacaactacagcttcactacattagacctgatgaagatgaatgatcgatgt
gatgaagccttgaaggagatatttcacatgtcttatattgtaatatgcaggttactcaat
gaggtctataaacatattcactgcttgtataagctgtctgatgctgtgtccatgctggat
atgttactctcccttgccaatgtttgcactatttcagactacgtgcggcctgaattcact
gatacactagcaataaaacaaggccgccatccaatcctggagcgcattgctggccagcag
cccatccccaacaacagccatatctctgagggaaacaactttgttataatcacaggccca
aacatgagtggcaagtctacttatctcaaacaagtggccctctgccaaatcatggctcag
ataggatcattcgtgcctgctgaatttgcctccttccgtgttgctgatcagatattcact
cggataggagtagacgacgattttgagaccagctcctcaacatttatggttgagatgaag
gaggtgtcctacataatacacaatgcaagtaacaggtcactcattattattgatgagctg
ggacgtggcactagtgctgaggagggcattggaatttgccactcggtttgtgagttcctc
atcggtctgaaggcattcactctctttgccacccacttcctcgagctgtgtcagttggag
actctttaccccaatgtagagaatcagcacatgcaggtccagcacatgcgtgggacagaa
aacggctcagagagtgtagtctacacctacctgctgactcaaggcttctctgaggaaagc
aactacggtataagagcagcagagaacacctcacttccactgtccatcatccaggaggcc
aagtctatatcatcaaaagttagcctaaagttatgggctaagcatcatagtgatccaacc
accctgagacaaggggcagtgtttcgtcttgccaccagattaatacagacggcccgaaat
tccaggttggatccagacagcctccgtctttacctaaagggcctaaaaagaaggcatgaa
gctgagataaaggacagattagtgtccattgagacagaagagtga
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