Tachysurus vachellii: 132852897
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Entry
132852897 CDS
T09596
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132852897 (polrmt)
Enzymes [BR:
tvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132852897 (polrmt)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
132852897 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
132852897
NCBI-ProteinID:
XP_060736391
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All DBs
Position
1:complement(26655044..26695521)
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AA seq
1300 aa
AA seq
DB search
MSLLRLCAFPKHLSGRLMFERSVCSTVNVNRCRLRLRSNSERGTRDNPWTTLHQRDYSAI
PKKEEGRRRVWEQSHLLDVLEARMQQLQSDVLHVKHLKVEIVPHGEKSATPVRSQKTEAE
TPKTLQSTKKGTTKDNQPSKTHVSRWIEKLKLEKSNKSKKQSSLQQKFQNKAATAGAAKS
SKGNLMGPGTSLKTISTAQRSNQPKPGSTTSPKPSPQRVQHLKVSKHSTSVASMKEDPEE
LSRAAELAEVEELEEMIGEWTPNAEKLLEDKDGNHYGDAQLNLRCYLEACVFTGDLERAQ
RCLFFHHRHLSKRKSLSISAYNIMMRMWAKKGSVNHIGRLFAMVEEAGLKPNIASYCAAL
ECMGRNAETSTRTINRCLQQMAESGLHLDNMFRQCAFKQDERDVVLKAIRTVQPDYEPHA
TSERPHCSSPLVENFYTQRENASYPKLDFSVAELQERFRHQLAIEQANTITIDSVEAIKP
VTEHMARMRKLLAEQRSHWHKALLQALRDSRMVLGSSNQRNWKISIHPFLRILRDEDYVN
IMLQGLANLPPSGESLLFLAKELGNRVHNMYCIQQKSHSQIVKKLGNIYNSYAKLLGKDT
APRSVLLREQWSTLEEEQAAGPSLLSDDTPWPHMLVIQLGSFLVDLLVRELKIPNNILNS
SLENKLIPVLYHMYTFRSNRQIGFIKPHPILTQIQSEAMETKLTFDSYVMPMLCPPVPWT
SAKSGAYLLTPTKLMRSVEGAIQHQLLLEKCQDEELYAVLDSLSQLGNCAWRIHKPLLDI
IISIFNDKGSEKLDVPPPVTEAPEIPRFNPHDPEYTPAEKAHLKREATRAKKKVAEMHSL
RMDALYKLSIANHMRDEIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRALLLFAEGKPLGP
KGLDWLKIHLVNLTGLKKRSSLAGRLEYANTIMDDILDSADKPLTGRKWWMNADEPWQTL
ACCMEIANASRSHDPTQFISHFPVHQDGSCNGLQHYAALGRDVIGAMSVNLVPCEEPQDV
YSSVAQQVEEFRARDAAKGMKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLK
EIDDFPKEYIWDASHYLVHQVFSSLKEMFTGTREIQDWLTESARLIAKSGSTVEWVTPLG
LPIVQPYHRTRNHVLKSNIQFLSLQINHDVYERPDTVKQKNAFPPNFIHSLDSTHMMLTA
LNCYSAGLTFVSVHDCYWTHALTVDIMNKVCREQFVALHSQPILQDLSKFLLQKYCSGPP
VNTKSKKFLEYWKMSQLLGKVPETGDFDLQRVKESTYFFS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttaagactctgcgcttttcccaaacacttaagcggtagattaatgttcgag
agaagtgtctgctctacagtaaatgtcaaccgttgtcgactcagactacggagtaacagc
gagagaggaaccagagacaacccatggacaacactacaccaaagggattactccgctatt
cccaagaaggaagaagggagaagaagagtgtgggaacagtctcatttgttggacgttctc
gaggctcggatgcaacagttgcagtcagacgttttacacgtaaaacatttgaaggttgaa
attgtgcctcatggtgaaaaaagtgccactccagtgaggagtcaaaagacagaggcagaa
actcctaaaactcttcagtccactaaaaaaggtaccactaaagataaccagccgtccaaa
acacacgtgagccgctggattgagaaactgaagcttgagaagtcaaacaagtctaaaaaa
cagtcgtctctgcagcagaaatttcaaaacaaggcagcaacagccggagcagcaaaaagc
agtaaaggaaatctgatgggacctggaacatccctgaaaacaatatctactgcccaaagg
agcaaccaacccaaacccgggtccacaacgagtccaaagcctagtccacaacgagtccaa
cacttaaaagtgtctaaacatagtacaagcgtggcctcgatgaaggaagatcctgaagaa
ctttccagagctgcagagctggctgaagtcgaagagcttgaagagatgatcggtgaatgg
actccgaatgctgagaaacttctggaagataaagatgggaaccattatggtgacgcccag
ttgaacctgcgctgctacttggaggcatgcgtttttactggggacttggagcgagcacag
cgttgcctgttttttcaccacagacacctaagcaaacgcaaatcactctccatcagcgcc
tacaacatcatgatgaggatgtgggccaagaagggatccgtgaatcacattggtcgcttg
ttcgctatggtggaagaagcaggcctgaagcccaacatagcgtcatactgtgcagctctg
gagtgcatgggccgcaatgctgagacctctacacgcaccattaacaggtgtctgcagcag
atggctgaaagtggcctgcatttggacaacatgttcaggcagtgtgctttcaaacaggat
gagagagacgtggtactgaaggccatccgtaccgtacaacccgattacgagccacacgcc
acttctgaacggccgcactgctcgtcaccactggtggagaacttttatacacagcgggaa
aacgccagctatcctaagctagacttcagcgtggctgagctgcaagagcgcttcaggcat
cagctggcaatagagcaggccaacaccatcaccatcgactctgtggaggccattaaaccc
gtcactgaacacatggccaggatgaggaagctgttagctgagcagcgctcccactggcac
aaagctctgctacaagctctaagagatagccggatggttttaggcagcagcaaccagagg
aactggaagatcagcatccaccccttcctgcgcatccttcgagacgaggattatgtcaac
atcatgctgcagggattggccaacctgccacccagcggagagtctttgctattcctggct
aaggaactgggcaacagagttcacaatatgtactgcatccaacagaagagtcacagccag
atagtaaaaaaactgggaaacatctacaactcgtacgcgaaactgctcggaaaagacaca
gcgcctagaagtgtgctgctacgggagcaatggagcactttggaggaagagcaagcagct
ggcccttcactcctgagcgatgacacaccgtggccgcacatgctggtcattcagctgggc
agctttttggtggatctgctggtccgtgagctcaaaatcccgaacaacatcctgaactcg
tcgctggagaacaagctcatccctgtgctctatcacatgtacacattccgcagcaatcgg
cagattggtttcatcaagccacatccaatcctgacccaaatacagtcagaagccatggag
accaagctgacctttgactcgtatgtgatgcccatgctgtgcccaccagttccctggaca
tcagccaagagtggggcttacctgctgactcccaccaagcttatgcgctcagttgagggt
gccatccagcaccagctgctgctggagaaatgccaggatgaggaactgtatgctgtgttg
gactccctcagccagctgggcaactgtgcctggaggatccacaaacctctgttggacata
atcatctccatctttaatgataagggcagtgagaaactggatgtgcccccacctgttaca
gaagcaccagaaattcctcgcttcaatcctcacgacccggaatacactcctgccgagaag
gcccatcttaagcgcgaggccacacgggccaagaagaaggtggctgaaatgcacagtctg
cgcatggatgcactctacaagctgtccattgccaaccacatgcgagatgagattttctgg
ttccctcacaacatggatttccgtgggcgtacttacccatgcccaccctactttaaccat
ctgggaagtgatgtaaccagagccctcttgctgtttgctgaaggaaagccgttgggtcct
aaaggcctggactggttaaagatccacctggtaaacctgacgggtctgaaaaagcggagt
tcgctggctgggagactggaatacgccaacactatcatggatgatatcctggactcggca
gacaaacctttaacgggcaggaagtggtggatgaatgctgatgagccatggcagactctg
gcatgctgcatggaaatagcaaatgcctccagatcacatgaccccacgcagttcatctcc
catttccctgtacatcaggacggttcctgtaatggccttcagcactatgctgcactgggt
cgtgatgtgattggtgcaatgtctgtaaacttggtgccctgtgaagaacctcaggatgtc
tacagtagtgtggctcagcaggtggaagagtttcgagcccgagacgctgcaaagggcatg
aagattgcacaggtgctggagggtttcatcagccggaaggtggtgaagcaaacagtgatg
acggtggtctatggggtcacgcgctatggcggccgactacagatcgagaagcgccttaag
gagatcgatgactttcctaaggagtatatttgggatgcctctcactatttagtgcatcag
gtcttcagcagcttgaaggaaatgttcaccgggacgagagagattcaggactggcttaca
gagagtgctaggctaatcgctaagtccggcagtacggtggagtgggtgacccctctcgga
ctacccatcgttcagccttaccaccgtaccaggaaccacgtgctcaagagcaacattcag
tttctgagtctccagataaaccatgacgtctatgagagaccagacacagtaaagcaaaaa
aatgcctttcctccaaacttcatccactctctagactccacacacatgatgttgacggca
ctcaactgttacagtgctggtttgacattcgtttcggtgcatgactgctactggacccac
gctcttacagtagatattatgaacaaggtgtgtcgtgagcagtttgtggccttgcacagt
caacccattcttcaggacctctccaagttcctgctgcaaaagtattgctctggaccacca
gttaacaccaagagcaagaagtttctggaatactggaaaatgtctcagctgctggggaag
gttccagaaacaggtgattttgatctacagagggtgaaggaatccacatatttcttcagt
tga
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