Tachysurus vachellii: 132853003
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Entry
132853003 CDS
T09596
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tvc
Tachysurus vachellii
Pathway
tvc04517
IgSF CAM signaling
tvc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132853003 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132853003 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvc04812
]
132853003 (sptbn1)
Cytoskeleton proteins [BR:
tvc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132853003 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
132853003 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
CAMSAP_CH
PH_11
SOS1_NGEF_PH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
132853003
NCBI-ProteinID:
XP_060736903
LinkDB
All DBs
Position
1:complement(39211533..39298977)
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVKNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELEAENYHDIKRITARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNTNAQKFAVDDDGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEVKIRERIAD
LQAQWAALEQLAAVRKARLEEACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAAAEVASYRPVIDSLHEQAQALPDELGQSADITGRLAGIEERYKELAELTRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMVIPEKLEDLEVIQHRFENLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAVEHPEQAKAITDRLAEIGTVWEEMKDTLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWTNEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLEKIEKEGMQLVSEKPETESVVKEKLSVLQTQWQELESTTQTKAQCLFDANK
AELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRVVVEKKFRELLDPLEKRKKFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSQSIVTVDTPGVDS
IRTRLAELQDLWNLLIQEAAKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDAARLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REVGRSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERRRKPPT
PEPELEIEAQQREGEQIAQNGLPSDQDSPRDGVDGEIVNGVPERSSKEASPIPSPSSSRR
VKGSQSSTLPAKSQESPSAQLEGFLHRKHEYEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAICEVAVDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSDVTPSNQSTPASSRAHTLPASVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgccgaatatgaccacatggacatccagcagcagtaccaggacact
gtcaaaaaccgctgggatgaggagtgggacaacgagaacagctcggcccgcctgttcgag
cgctcacgcatcaaggccttagcagatgagcgtgaagcggtgcagaagaagacctttaca
aaatgggtgaactcccacctggcgcgggtctcctgccgcattacagatctgtatatggac
ctgcgggatggacgcatgctcatcaagctcctggaggtgctttctggagagaagctgccc
aaacccacaaaggggcgaatgagaatccactgtctggagaatgtggataaagccttgcag
ttcctcaaggaacaacgcgtccatctggagaacatgggctcccacgacattgtcgacggc
aaccatcgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccaagac
atcagcgttgtaacagaagacaataaggagaagcgctcggccaaagacgctctgctcctg
tggtgtcagatgaagacggcaggatatccaaatgtcaacatccacaacttcaccaccagc
tggcgcgacggaatggcgttcaacgccctcattcacaaacacaggccagatcttattgat
tttgacaagctgaagaaatccaacgttcactacaacctgcagaacgcctttaacttagct
gagcagcacctgggactcactaaactgctcgacccagaggatatcagtgtggatcatcct
gatgagaagtcagtcatcacctatgtcgtcacatactatcactacttctccaagatgaag
gctcttaaggtggagggaaaacgtatcggcaaagtgttggataacgccatcgaaacagag
aagatgatcgagaaatacgagtctcttgcatcagatcttctggagtggattgagcagacc
atcatcatcctcaacaaccgcaagtttgctaattctctggtaggggttcagcagcagctc
caggccttcaacacgtaccgcactgtagagaagcctcccaagttcacagagaaaggtaac
ctggaagtcctcctgttcacaattcagagcaaaatgagagccaacaaccagaaagtttac
atgcccagagagggcaagctgatttcagacatcaacaaggcgtgggagcgtctggagaag
gcggagcatgagcgcgagctggctctgaggaacgagctgattcgtcaggagaagctggag
cagttggcacgccgcttcgaccgcaaggccgccatgagagaaacctggctcagcgagaac
cagcggctggtgtcacaggacaacttcggcttcgatctccaagcagtggaggcggccacc
aagaagcacgaagccatcgagacggacattgcagcttacgaggagcgtgtgcaagccgtg
gtggctgtggctagagaactggaagcagagaactaccatgatatcaagcgcattacagca
cgcaaggacaatgtgctgcgtctctgggactacctactggagctgctgaaggcgcgtagg
cagaggctggagatgaacctgggtgtgcagcgtgtcttccaggagatgctttacatcatg
gactggatggatgagatgaagatgcttctgctgtctcaggactatggaaagcatttgctg
ggagtagaagatctgcttcagaaacacgctctggtggaggctgatatcgccatccaggca
gaccgcgtgagggccgtcaataccaacgcccagaagtttgcggttgatgatgatggttac
aagccatgtgatccgcaggtgatccgtgatcgtgtggctcacctggagttctgctaccag
gagttgactcagctggcggctgagcgccgcgcacgtctggaggagtctcgccgtctctgg
aagttcttctgggaaatggctgaggaggagggctggatccgtgagaaggagcagattctg
tcatccgatgacgttggaaaggacctgacaggtgccgtacgtttgctgagtaagcatcgg
gcgcttgaggatgagatgagcggtcgcgctgggcacctgcagcacacggtacgtgagggt
caggcaatggctgacgctggtcacttcggagaggtgaagatccgcgagcgcattgctgac
ctgcaggctcagtgggcagcattggagcaactcgcggcagtccggaaggcacgtctagag
gaagcctgcagcttgcaccagttccaggctgatgctgatgatgtggatgcatggatgctg
gacgcgctgcgcatcgtctcaagcgatgatgttggccatgatgagttctccacgcaggca
ctggtgaagaagcacaaagatgcagcagccgaggtggctagctaccgacccgttatcgac
tcactccacgagcaggcccaggcactgcctgacgagctgggccagtcagcagacatcacc
ggacgcctggctggcatcgaggagcgctacaaggagctggcagagctcaccaggctgagg
aaacaagctctgcaggatgcactggctctctataagatgttcagcgaggctgacgcctgc
gaggtttggatcgacgagaaggagcagtggcttaacagcatggtgattccagagaaactg
gaggaccttgaagttattcagcacaggtttgagaatctggagcctgagatgaataaccag
gcttcccgcgtcgccgtggtcaatcagatcgcccggcagctgatgcacagtggacacccc
agtgagaaggacatcaaggctcaacaggacaaactgaacaccaggtggagccagttcaga
gacttggtggaccagaagaaggagtccctgaactcggcactgggtgtgcagaactatcac
ctggactgcaacgagaccaagtcatggatccgcgagaagaccaaagtgatcgagtccact
caggacctgggtaacgatctgacaggagtcatggcactgcagcgcaagctgacggggatg
gagcgcgacctggccgcaatcgaagccaagctgggtgacctgcgtggagaagccgagcgt
ctggcagttgaacatcctgaacaagccaaggctatcaccgacaggctggcggagatcgga
acagtctgggaggagatgaaggacaccctgcagaaccgcgaggcctctctgggtgaagca
agcaagctgcagcagttccttcgccagctggatgacttccagtcatggctgtctcgcacg
caaacggccatcgcctccgaggacatgcccaacaccctggcagaggctgagaagcttctc
gcccaacacgaaggcatcaagcacgagatcgacaactatgaagaggactaccagaagatg
cgggacatgggcgagatggtgacccagggccaaacggatgctcagcacatgttcctgagg
caacggctgcaggcactggacaccggttggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtcccagtctcacgcctaccagctgttcctcagagacacaaagcaagct
gagacattcctcaacaatcaggagtatgtgttggctcacactgagatgcccaccactcta
gaaggagcagaaggtgctattaagaagcaggaggacttcatgactacgatggatgccaac
gaggagaagatcaacggcgtggtggaggccgggcgcagactggccagcgacggaaacatc
aacgcggagaagattcaggagcgagcgacttccattgatgacagacataagaagaaccgt
gaggcggctgtggagctgctgatgagacttaaagataaccgagacctacagaagttcctg
caggactgccaggagctttctctgtggacgaatgagaagatgctgacggcacaggacatg
tcatacgatgaggccagaaacctgcacagcaagtggctcaagcaccaagccttcatggct
gagctccagtcgaacaaagagtggctggagaagatcgagaaggaagggatgcagctggta
tctgagaagcctgagacggagtccgtggttaaggagaagctgtcggtgctgcagacgcag
tggcaggagctggagtccaccacgcagaccaaagcacagtgtctgttcgacgccaataag
gccgagctgttcacgcagagctgcgccgatctcgacaagtggctggggggcctggagggt
cagatccaatcagacgactacggcaaagatctaaccagcgtcaacatcctgctaaagaaa
caacagatgctggagaaccaggtggaggtgcgtcagagggaggtggaggaacttcagtcg
caggcccacgtgttgcggcaggagggaaaggacacggacgaggtagacgggcggcgcgtg
gtggtggagaagaagttccgggagctgctcgatcctcttgagaagaggaagaagttcctc
atggcttctagggagatccaccagttcaaccgtgacgttgaggatgaaatcctctgggtg
gaggagaggatgcctctcgccacttcaactgaccatggcaacaacttacagactgttcag
atgttaatcaagaagaaccagaccctgcagaaggagatccagggccatcagccgcgctgt
gacgacatcttcgagcgcagccagagcatcgtgacggtggacaccccaggcgtggattcc
atccgaacgcgtctcgctgaactgcaggatctctggaacctcctcatccaggaggcagcg
aagaggcacgagcggctggaggaggcccatcaggcgcagcagtactacttcgacgcggct
gaggcggaggcctggatgagcgagcaggagctttacatgatgtcagaagagaaagctaag
gatgagcaaagctctgtggccatgctgaagaaacaccagatcctcgagcaggcggtggag
gactacgccgagaccgttcatcagctctccaagaccagccgcggcctggtggctgacaat
caccccgagagtgagagaataggcatgcggcagtcacaggtggataagctgtacgcagga
ctgaaggacctttcagaggagaggagaggaaaactagacgagcggttccggctcttccag
ctgaaccgcgaggtggatgatctggagcagtggatcgctgagagagaagttgtggcagga
tctcatgaactgggccaggactatgagcatgtcactatgctgcaggagcgtttccgtgag
ttcgctcgcgacaccggtaacatcggtcaggagcgcgttgacggcgtaaaccggatggcc
gacgagctcatcaacgcaggtcatgccgacgccgccaccgtcgccgaatggaaggacggg
ctgaacgaggcctgggcggatcttttggagttgatcgacactcgcacccagatcctggcg
gcttcctacgagctgcataagttctaccacgacgtcaaagagatcctgagccgcattctg
gacaagcacaagaagcttccagaagagctcgggcgagaccagaacacagtggaagcactc
cagaggatgcacaccaccttcgagcacgacatacaagcactggggacgcaggtcaggcag
ctgcaagaagacgcggcacgtttgcagtctgcgtacgccggcgataaggctgacgatatc
cagcggagagagagcgaggtcctagatgcatggcggaaccttctggaagcctgcgaaggg
cggagggcgcgtctgcttgacaccggagacaagttccgctttttcaacatggtacgtgac
ctcatgctctggatggaggacgtgatccgcctcatcgaggcccaggagaaacccagggac
gtgtcatctgtggagctgctcatgaacaatcaccagggcatcaaggctgagatcgacgct
cgtaacgacagcttcaccgcctgcatcgagctcggcaagtctctgttggcacgcaagcac
tacgcatcagaggagattaaagaaaagttgctacagttgaccgacaagaggaaagaaatg
atcgacaaatgggaagacagatgggagtggctgagactgattttggaagtgcaccagttt
tcgcgggacgcgggggtagctgaagcgtggttgctgggtcaggagccgtacctgtccagt
agggaggtgggtcggagcgtggacgaggtggagaagttgatcaagaggcacgaggcgttc
gagaagtcagccgctacctgggaggaacgcttctctgcgctggagagactgactacgttg
gagttactggaagtgagaagaaggcaagaagaagaggagagaagaagaaaacccccgacc
ccagagccggagctggagatcgaggcacagcagagagaaggagagcagatcgctcagaac
ggactgccgtcagatcaggattccccacgggacggagtggacggagaaatcgtgaacggc
gtgcctgagaggagctctaaagaggcgagccccatcccgtcgccaagctcaagcagacgc
gttaagggcagccaatcgtccaccctgccggccaaaagtcaagagtctccctccgcccag
ctggagggcttcctacaccgcaagcatgagtatgagggacacaataagaaggcatccaac
agatcctggcataatgtgtactgcgttatcaacaaccaagagatgggcttctacaaagac
aacaagaacgccggacagggcatcccgtaccataacgagatccccgtcagcctgaaggac
gccatctgtgaggtcgcagtcgactacaagaagaagaaacacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggatg
caggctattcagaacgcagtcagtggctcctctccttcagacaagtctgatgttacgcct
agcaaccagagcactcccgcatccagccgcgcccacacactccctgcgtccgtcaccctg
acaaccgagtcgagcccgggcaagcgagaaaaggacaaggagaaagacaaagagaagcgt
ttcagtcttttcagcaaaaagaagcagtag
DBGET
integrated database retrieval system
