Tachysurus vachellii: 132853167
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Entry
132853167 CDS
T09596
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03083
Polycomb repressive complex
tvc04980
Cobalamin transport and metabolism
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132853167 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
132853167 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132853167 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132853167 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132853167 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132853167 (hcfc1b)
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132853167 (hcfc1b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
132853167 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
132853167 (hcfc1b)
MLL-HCF complex
132853167 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
132853167 (hcfc1b)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132853167 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
132853167
NCBI-ProteinID:
XP_060736641
LinkDB
All DBs
Position
11:complement(3515870..3533189)
Genome browser
AA seq
1871 aa
AA seq
DB search
MASSGTNNTLSVSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDE
LHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRW
EWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLEL
RPGSNVAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDID
TLTWNKPTISGTAPLPRSLHSATTISNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLAC
LNLDSMSWETILMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWY
LETDRPLAPSRVQLVRANTSSLEVSWGAVPTADAYLLQLQKYEIPAATTASSPGVTPTSS
LPSNSPKSPALASPASQSMPVTGVTLVPQVPSPTTTMPGNPLAAASPRGPGKTILKVAAP
QTAAGTSIVTVRQASQVGKSPVTVASLPAGVRMVVPAQSGGTAIGSSPQMSGMAALAAAA
AATQKIPPSTTATVLNVPAGTTIMKTVAVTPGSTALPATVKVASPVTVSNPATRMLKTAA
AQAGTSTITTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSGG
TLLSSLGKVMSMVQTKPVQTSAVTGQAGSPVTQIIQTKGPLPAGTILKLVTSADGKPTTI
ITTTQAGGTGTKPTILGISPTSTTKPGTTIIKTIPMSAIQQGAAGTTSGTGIKSPITIIT
TKMVTPGTPGKIITAVPKLAAGTAQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTV
SAVKPTVTTLVVKGTTGVTTLGTVTGTISTSLAGGNVATANSSLATPITTLGTIATLSSQ
VISPTAITVSAPQTNLTTAPTVAIQAATQPTQVTLISTPSGVEAQQDLPVSILASPTSEQ
PSTTGTDAGDAPGEVTLVCSNPPCETHETGTTNTATTVSANIGNERVCSNPPCETHVTGT
TNTTTTASSDMGRVQQVCSNPPCETHETGTTNTSTQASSNMGIETNTVQRVCSNPPCETH
ETGTTNTATQASSSMGSAETNTVQKVCSNPPCETHETGTTNTATQASSSMGSTETNTVQG
ACSKSACESHETGTTNTATQASSSMGSAETNTVQRVCSNSRCESHETGTTNTPTQASSNM
GSAETNTVQRVCSNPPCETHETGTTNTPTQASSNIGTGQNGMVQRVCSNPPCETHETGTT
NTATTATSSLESPEGTAQQSGDGQDASTSAEATSLTESANPPIQSRAITTVTQATPTPGP
SVPEISSMAGSAAVAEGSGEAEAMDHGDSEAVAMGEEPMQTEAELGADGAVSVVAIEEGA
SGEAGTMLQVHVAMEAQPGQGEQAEMDQGGEGAEAVALAGQDSEALALPQELMSAEGQQA
TLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDSGQDGQQTT
TIPIVLTQQELAALVQQQQQLQEVQAAAAAAAAAASAQQMAAESSAAPLPTEGLAPADSL
NDPTTESNGHEMASAVTGAVAQLLPSTSAETLAPSSTLAPAQPMVVASPAKIQAATTLAE
VANGIESVAGKPGAPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSEVTDDDSG
AIPDYSQMKKVELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQTS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDTK
GTGPKKARADQ
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctggtactaacaacacattgagcgtgtcgggctcggtgttgcagccgagg
tggaagcgggtgctcggatggtccggcccggtgcctcggcctcgtcacggacaccgcgcc
gtcgccattaaagagctgatggtggtgttcggcggcggcaatgaaggaatcgtggatgaa
cttcacgtgtacaacacagcgactaatcagtggtttatcccggccgtccggggcgacgtg
ccacctggttgtgctgcttatgggtttgtgtgtgatggcacccggctgttggtgttcggg
ggaatggttgaatacggaaaatacagcaacgatctctatgaactacaggctagtagatgg
gagtggaagcggctgaagcctaaagctccaaagaacggcccacctccttgtccacgcctg
ggtcacagcttctccctcgtggggaataaatgctacctatttggaggacttgccaatgac
agtgaagatcccaaaaacaatattccaagatacctgaatgacctgtacacactcgagctg
cgcccaggatccaacgtggcaggctgggacattcccatcacatacggcgtgcttcctcca
cctcgcgagagccacacagccgtagtctacacagagaaaacctcaaagaagtctcgcctc
gtcatctacggcggcatgagcggctgccgcctcggagacctctggacgttagatatagac
acacttacatggaacaagccaacaatcagtggcactgctcctctccctcgcagtcttcac
tctgccaccaccatatctaacaaaatgtatgtgttcggtggatgggtgcctctggtgatg
gatgacgtgaaagtggctacgcatgaaaaagaatggaagtgtacaaacacgctggcatgc
ctaaatctggactcgatgagctgggagactattttaatggacactcttgaagacaacatc
cctagagccagggcagggcactgctctgtagccatcaactccagactgtacgtctggagc
ggcagagacggctaccgcaaagcctggaacaaccaagtgtgctgcaaggacctctggtat
ttggagacagaccgtcctctggcgccatctcgtgtgcagttggttcgtgccaatacaagt
tctctggaggtgagctggggtgctgtgcccactgctgatgcctacctgctgcagctgcag
aaatacgaaattccagcagcaacgactgcctcctcccccggcgtcactcccacttcctcg
ctaccctcaaactcacccaagagcccggcccttgcttcccctgcctcgcagagcatgcct
gtcacgggggtcacccttgtaccacaggtgccctcacctaccacaactatgcctgggaac
ccacttgctgcagcctcaccgcgtggtccaggtaaaaccatcttgaaagtggcagcacct
cagaccgccgctgggacgtctatcgtcaccgtgcgtcaggccagtcaagtcggtaaatcc
ccagttacagtcgcgtctcttcctgctggggtccgtatggtcgttcctgcacagagtgga
ggaacggcgatcgggagcagccctcagatgagcggcatggccgctctggccgcggctgcg
gctgccacgcagaaaatccctccttcgacaacggccactgttctgaacgttcccgcagga
accactataatgaaaaccgtcgcagtcactccaggctccacagctcttcctgctacagtg
aaagtagcctcaccagtgactgtgagcaatccagcgacccgcatgctgaagacggcggca
gctcaagccgggacttctaccatcactacccccaacacgccaacacgtcccatcatcacc
gtgcacaaatcgggcacagtgaccgttgcccaacaggcccaggtggtcaccaccgtggtg
ggaggagtcactaaaaccattacgctcgtaaagagcccgctgactatgggcagcggtggc
actctgctctctagcctggggaaggtgatgtccatggtccagacaaaaccagttcagact
tctgcagtgacgggacaagctggcagtcctgtcacacagatcatacagacgaagggtcct
ctgcccgcaggcaccatactgaagttagtcacctcggcagacggcaaacccaccaccatc
atcactaccacgcaggcaggtggcactggcaccaaaccgaccattctgggcatctcccct
acaagcactaccaaacctggcaccaccattattaagaccattccgatgtccgctattcag
cagggagctgcgggtactacctctggcactggtataaagtctcctattacaatcatcaca
acaaaaatggtgacgcctggcacaccaggaaagatcatcactgcggtgccaaaactggct
gctggaactgcgcagcaaggattgactcaggtggtcctaaagggggcaccagggcagcct
ggcaccattcttcgcactgtgcccatgggtggtgtgcgtcttgtttctcctggtaccgtg
tctgctgtcaaacccacggttaccacacttgtggttaaaggcaccacaggagtaactact
cttggcactgtgactggaacaatttcaaccagcctggcagggggcaacgttgccactgct
aattctagtctggctactcccataaccaccctgggcaccatcgccacactctccagccaa
gtgatcagccccacagcaatcacagtgtctgcaccccagacaaacctgactactgcacct
acggtggccatacaggcagctacccagcccactcaagtgacactgataagcacccccagt
ggtgtggaggcacagcaggacctccctgtgtcaattctggcttcccccacatctgaacag
ccctctaccacgggcactgatgcgggcgacgccccgggcgaagtcacactggtctgttcc
aacccaccatgcgagacccacgaaaccggtacgaccaacacggccaccaccgtctctgcc
aacattggaaacgagcgtgtgtgttcaaacccaccctgtgagacacacgtgaccggaacg
accaacacgacgaccacggcgtcgtccgacatgggccgcgtgcaacaagtatgcagcaac
ccaccatgcgaaacacatgaaacgggcaccacaaacacgtcaacacaggcgtcctcaaac
atgggcatagagaccaacacagtacagagagtatgttccaacccaccatgcgaaacacac
gaaaccggcactaccaacacagctacacaggcatcttcaagcatgggcagtgcggagact
aacactgtacagaaagtgtgttccaacccgccttgtgagacccatgaaaccggcaccacc
aacacagctacacaggcatcttcaagcatgggcagcacagaaaccaacactgtacaagga
gcgtgttccaaatcagcttgtgagagccatgaaaccggcaccaccaacacagccacgcag
gcatcttccagtatgggcagcgcagaaaccaacacagtacagagagtgtgttctaactcg
cgttgtgagagccatgaaaccggcaccaccaacacacccacgcaggcctcttccaatatg
ggcagcgcagaaaccaacaccgtacagagagtgtgttctaacccgccatgtgagacccac
gaaaccggcaccactaatacaccaacacaggcttcatccaacatcggcacaggacaaaat
ggcatggtgcagagagtgtgttccaacccgccgtgtgagacacacgagaccggcaccacc
aacacagccactactgccaccagcagcctcgagtcacccgaaggaacagcgcaacagagc
ggtgacggacaagacgccagcaccagcgccgaggcgacttcgttgaccgaatctgctaat
cccccgattcagagcagagccatcaccactgtgacgcaggccacgcccaccccaggaccc
tctgttcctgaaatctcatccatggcaggttctgctgctgtagcggagggctctggtgaa
gctgaggcaatggaccatggagactctgaagcagtagcgatgggagaggagcccatgcaa
actgaggctgaactgggtgccgatggagctgttagtgttgttgctatcgaggagggtgct
tctggtgaagcgggcaccatgctgcaggttcacgttgccatggaagcacagccaggacag
ggagagcaggctgagatggaccagggtggtgagggtgcagaagctgtggctctggcaggg
caggactctgaggccttggcgctgcctcaggaactaatgtcagccgaggggcagcaggcc
acgttgatggtgacaggactgaccccggaggaacttgccgtcactgctgcagcagaagcc
gctgctcaggctgcagccacagaagaggcccaggcactcgccatacaggctgtgctgcag
gcagcccaacaggccgtgctcaatgaaggagactctggacaggacggtcaacagaccacc
acaattcctatcgtactgacgcaacaggaactggctgctctggttcagcagcagcagcag
ctccaggaggttcaagcagcagcagcagcggcagcagccgccgcctctgcccagcaaatg
gcggccgaatcgagcgcagctcctttgcccaccgagggcctggcacctgcggacagcctc
aacgaccccacgaccgaaagtaacggtcatgagatggcttctgcagtaactggagctgta
gctcagcttctacccagcacttctgcagagactttggctccttcaagtacacttgcccca
gcccagcccatggtggttgccagccctgccaagatacaggctgccactacgcttgctgag
gtggccaatggcatcgagtctgtagctgggaagccaggagcaccgcctgcagttgtgaaa
ccgccagtgaagaaagaaaatcagtggtttgatgtcggaatagtcaaagtgaccaacatg
gtcgtcacacattattatgtcccagcagatgattcagaagtcaccgatgatgattctggg
gccataccagactacagtcaaatgaagaaggtggagctctctcctggcaccgcttacaag
ttccgtgtggccggaatcaacgcttgtggccgtggaacgttttctgaagtgtccgcgttc
aagacttgtttgcccggtttccctggagcaccgtgtgccattaaaattagcaagagtcct
gatggtgcgcacctcacctgggaacctccatcagtgacgtcagggaagatcatagagtat
tccgtctacctggccatccagagctctcagacgaccgaggcaaaaccatctgccccggct
cagctggcttttatgcgggtgtactgtgggccaaacccttcctgcctagtccagacttcc
agcctgtccaatgctcacattgactacaccaccaaacccgccatcatcttccgcattgcc
gcccgcaatgagaagggctacggccctgctacgcaagtcaggtggctacaagaaacgagt
aaagatggatctgctgccaaacctgcagcgaagagaccggtttcatctcctgatacgaaa
ggtaccggtccgaaaaaggcgagagccgaccagtga
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integrated database retrieval system
