KEGG   Tachysurus vachellii: 132853411
Entry
132853411         CDS       T09596                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tvc01009]
    132853411 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvc03036]
    132853411 (kdm5c)
Enzymes [BR:tvc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     132853411 (kdm5c)
Protein phosphatases and associated proteins [BR:tvc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132853411 (kdm5c)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132853411 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD zf-PHD-like
Other DBs
NCBI-GeneID: 132853411
NCBI-ProteinID: XP_060737119
LinkDB
Position
11:complement(21674049..21695945)
AA seq 1579 aa
MAMEAGDEFIPPPECPVFEPSWEEFTDPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVE
VDNFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLSKIV
TEEGGFETVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEMFHSGASLLQCKPR
PYESEDVDKEYKPHSIPLRQSVQPSKTSSYGRRANRLQPEGPEDPNHHPLTTGSQHSSSP
EPTEEDIEKNPELKKLQIYGAGPKMMGLGLVARDKARKKDELPQTVIVKDNSSIKEESGE
TLITKSEPDIPPPPPNLIVKDEVKKKEEDEGRAVDSKDPIKDEPCTKMTMRLRRNLSSAQ
FVDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLADPPKGNWRCPKCVAEECKKPT
EAFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEY
GADIHSKEFGSGFPVNNGKRHLTEEEEAYARSGWNLNVMPVLEQSVLCHINADISGMKVP
WLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEKLEEVMKKLTPELFEFQ
PDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTA
DWLPTGRSCIEHYRHLRRYCVFSHEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKL
RKALLEKGITEAEREAFELLPDDERQCDKCKTTCFLSALACTNCPERLVCLHHTQDLCSC
PIDKLYLRYRYTLDELLAMLYRLKVRAESFDSWANRVKEALEQEEGNKIDIKNLVALKDE
AVERKFPDNELLQRLTVVMDDIQRCQSRSTELLNGTQCSKMSLQELQALVDTMQNLPCVM
EQLGEVQVVLQKVEAFESRAQAVVSQSVGEWKQSLVPSEEDVQALLEEGSALPAVAPACG
LLSGLQEQRRWLEQVRRTIGPGGGEVTLTVLRNLMEAGCNVLQSVSVETAMAELQELLTI
AERWEEKAQICLEDRQKHPLSTLEAIVNEAQLIPVQLPNILALQACLSRARAWVTDLEEI
QQNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWREKASKTFLKKNSQHSL
LEVLCPCVEKRKKKEEDSLSSEADTDVDVLGLTAQDLRDPGAIVMAFKVGEQHEKGALLC
MRKLNMAKPGLENTPKEGQTTDFKQELRWNESMNTDTPLSSENSSQQNGGSTHSYAVSQS
VCVCGDQTHTLLHRCHLCRDWFHGGCVPFPSVLGPTDVPLVNPLCWWDWDTRFLCPRCQR
TRRPRLETILALLVALQKLPVRLPEGEALQCLTERAINWQGRAKQALDSSELQGALQRLQ
ELKETQARNIEVQKDEKKRNSGDVIVLSDSEEPEDSVIDLTEEREMAKNNREKASNGILS
GCENGVKKPDTENVTGVESLVPLIPYLKGPVIDLATATRAQLEELQLEGDLLEVTLDQTH
TIYRLLQAASPPPRQTLHTLIQIELQEQKRSGRSSRTRDSKRKRKSQRSEGGVKSAEASD
SKKTRPVIHTPVQQQEEVL
NT seq 4740 nt   +upstreamnt  +downstreamnt
atggcaatggaggccggggatgagtttattccgcctccagagtgtcccgtgttcgagccg
tcgtgggaggagtttacagatccactcggatacattgccaagatccgtccaattgcagaa
aagtctggaatatgcaagattcgccctccaccagactggcagccaccttttgctgtggaa
gtggacaatttccgttttacaccccgtatccagaggctgaatgagctagaggctgagaca
agagtgaagctgaactatctagaccgaatagccaaattctgggagatccagggatcttct
ctcaaaatccccaacatagaacgacgcattcttgatctgttcagcttgtccaagattgtc
acagaagaagggggctttgagacggtcagcaaggagaggagatgggctcgtgtagctcag
aagctcggctacccgccgggcaaaaatattggctccctcctccggtcgcactatgagagg
atcgtctatccttttgagatgtttcactctggtgctagcttactgcaatgtaagcccagg
ccatatgaaagtgaggatgtggataaggagtacaagccccactctattcccctccgtcag
tcagtccagccttccaagaccagcagttacggacgacgagccaaccgcctccagcccgag
ggtccagaggatccgaatcaccaccctcttaccactggctctcaacacagctcctcgccg
gagcccaccgaggaagacatagagaagaatccagagctgaagaagctgcagatctatgga
gctggaccaaaaatgatgggactcggtctggtggctcgggacaaggctaggaagaaagat
gaactcccccagactgtaatagttaaggacaacagcagcattaaagaagaatctggagag
acattaatcacaaagtcagagccggacattcctccaccacctccaaacctcatcgttaaa
gatgaggtgaagaaaaaggaagaggatgaaggccgtgccgttgactcaaaggatcctatt
aaagatgaaccttgcaccaagatgaccatgaggctgagacgcaacctcagcagcgcacag
tttgtggactcgtttgtgtgtcgtatgtgcggccgcggggatgaggacgagaagctgctg
ctatgtgatggttgcgatgataattaccacactttctgccttctccctcccctcgcagac
ccccccaagggaaactggcgttgtcccaaatgtgttgcagaggaatgtaagaaacccaca
gaagcgtttggtttcgagcaggctactcgagaatacacgttacagagtttcggtgagatg
gctgacacgttcaaggctgattacttcaacatgcctgtccacatggtcccaacagagctg
gttgagaaggagttttggcgattggttagcagtattgaagaggatgtgactgtcgaatat
ggtgctgacattcactcaaaagagtttggcagtggttttcctgtcaacaatggcaagaga
catttaaccgaagaagaggaggcatacgcacgcagcggctggaacttgaatgtgatgcca
gtgttggagcagtcagtattgtgtcatatcaatgccgacatctctggcatgaaggtgccg
tggctgtacgtgggcatggtattttctgccttctgttggcacatagaggaccactggagt
tactccatcaactacttacactggggggagcccaagacgtggtacggtgttccttcagta
gcagcagagaagctggaggaagtgatgaagaagctcacacctgaactctttgagttccag
ccagatctgctccatcaactcgtcacaatcatgaaccctaatatactcatgtcccatgga
gtgccggttgtgcgtacgaatcagtgtgctggagagtttgtcatcacattccctcgagcc
tatcatagtggcttcaatcagggatataattttgctgaagccgtcaatttctgcactgca
gattggctgcccacagggcggtcatgtattgagcattacagacacctcagacgttactgc
gtgttttctcatgaggagctcacctgtaaaatggccgcctgcccggagaagctggacctg
aacctggctgcagccactcacagagaaatgtttattattgttcaagaggagaggaaactc
cgcaaggccctgctggagaagggtataacagaggcggagcgagaggcctttgagttgttg
cctgatgatgagaggcagtgtgataagtgcaagaccacctgcttcctgtctgccctggct
tgcaccaactgccctgagcgccttgtctgcctccaccacacacaagacctctgctcctgc
cccatagacaaactctacctcaggtatcgctacactctagatgagctgttggccatgttg
taccggttaaaagttcgggctgagtcctttgactcttgggctaacagagtgaaagaagcc
ctagagcaggaggagggcaacaaaatagatattaaaaatctggtggcactgaaggacgaa
gcggtagaacgtaaatttccagacaacgagctgctccaaaggctcacagttgtaatggat
gatatccagaggtgccagagcaggagcacagagcttcttaatggaacccagtgcagtaag
atgagcctccaggagctccaggcgctggtggacaccatgcaaaaccttccttgtgtaatg
gagcagcttggggaggtgcaggttgtgctacagaaggtggaggcgtttgagtcacgtgcc
caggctgtagtgagccaaagtgttggggagtggaaacagtctttggttccctcagaagag
gacgtgcaggctctgttagaggaaggttctgcactcccagctgtggctccagcctgtggg
ctactgtctggccttcaggaacagagacgctggctggagcaagtgcgcaggacaattggg
cctggcggcggagaggtgactttgaccgttctgagaaatttgatggaggccggctgcaac
gtgctgcagagcgtcagcgttgagactgccatggcagaactgcaggagttgctgaccatc
gcagagcgctgggaagagaaggcccagatttgccttgaagaccggcagaagcatcctctc
tccacattggaggccatagtgaatgaggcccaactcattcctgtgcagctgcctaacatc
ttggccctccaagcctgtctgagtcgagcccgggcctgggtcactgacctagaggagatc
cagcagaatggagagcactatccatgtctggatgacctggagggtctggtggcaattggt
cgagaccttcctgtccggatggaggagttacggcaactcgagctgcaggtggccagtgct
cactcctggagggaaaaggccagcaagaccttcctgaagaaaaacagccagcacagcctg
ctggaggttttatgtccttgtgtggagaagaggaagaagaaggaggaagactctctgagc
tcagaagctgacactgatgttgacgtgttgggtctcactgctcaggacctcagagatcca
ggagccattgtaatggcattcaaggtgggagagcagcatgagaaaggggctctgctgtgt
atgcgaaagctgaacatggccaagcccggtctggagaacacacccaaggagggacaaact
acagacttcaaacaagagcttaggtggaatgaatcaatgaacacagacacaccactgtcc
tcagaaaacagctcacagcagaacggtggctccacacactcctacgccgtcagtcagtct
gtatgtgtgtgcggtgaccagacccacactctgcttcaccgctgtcatctgtgcagagac
tggttccacggaggctgtgtgcccttcccttctgtactgggccctactgacgtgccactt
gtaaacccactctgttggtgggactgggacacacgcttcctgtgcccacggtgccagaga
acacggcgtccacggctagaaaccattctggcattgttagtggcgttacagaagctgcct
gtgagactgccagagggtgaggccctccagtgtcttacagagagagctattaactggcag
ggccgagccaaacaagccctggattccagtgagctgcagggggcactgcagaggctgcag
gaactaaaggaaacacaggccaggaacattgaggtgcagaaggatgaaaagaaaaggaat
tctggggatgtgattgtactctcggactctgaggagccagaggatagtgtaattgatcta
actgaggagcgtgaaatggcaaaaaacaacagagagaaagcatctaatggaatactgtct
ggctgtgaaaatggcgttaagaagccagacactgagaacgtaacaggggtggagtctctg
gtgccattgattccgtatcttaaagggccagtaatcgatctggccactgcaactagagct
cagttagaggagctgcagctagaaggcgatctgctggaggttactctggaccagacgcac
accatctaccgacttctgcaagcagcctctccaccaccacgccagactctacacacactt
atacagattgagttacaggagcagaagcgctcaggtcgtagcagcaggacaagggactcc
aaaaggaagaggaaaagtcaaagatccgaaggaggagtaaagtcagcagaggcctcagac
tcaaagaagacacgacctgttatccacacacctgtacagcaacaagaggaggtcttgtga

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