Tachysurus vachellii: 132853511
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Entry
132853511 CDS
T09596
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132853511 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132853511 (lsm1)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132853511 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
132853511 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132853511
NCBI-ProteinID:
XP_060737293
LinkDB
All DBs
Position
11:complement(26646277..26655871)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKDCDQILQRVSIEEILEEQRVEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccggggaccgccagcctcatcgaggacatcgacaagaagcatctggtt
ctgctgagagacgggagaacattgatcgggatcctcaggagcatcgatcagttcgcgaac
ctggtcctgcaccagacggtggagcgaatccatgtggggaaaaagttcggagacattcct
cgtgggatcttcgtggtccgaggagaaaatgtggttctgctgggagaagtagatctggat
aaagactgtgatcagatcctgcagcgagtctccatcgaggagatcctggaggagcagcgg
gtggagcagcaggccaagcaggagtcggagcgactgaagctgcaggcggtgaaggagcga
ggtttgtccatccccaaagccgacacgctcgacgatttctga
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integrated database retrieval system
