Tachysurus vachellii: 132853534
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Entry
132853534 CDS
T09596
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132853534 (apex2)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
132853534 (apex2)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
132853534 (apex2)
BRITE hierarchy
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
KptA_kDCL
Motif
Other DBs
NCBI-GeneID:
132853534
NCBI-ProteinID:
XP_060737335
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Position
11:12635760..12638920
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AA seq
564 aa
AA seq
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MKIVTWNINGIRTFKKGIKSALDAFGADIICVQETKVTRDMLDERTAIVDGYNTYFSFSR
GRTGYSGVATFCKDSATPFCAEEGLTGRLVNHGEAVGCYGDQGAFSIEELQSLDSEGRAV
ITQHKLKQSVQGEDSETLTIINVYCPRADPEKPERKHFKLQFYKLLQIRAEAIVGPQSHV
IILGDINTSHQPIDHCDPDDVENFEDNPGRKWLDSFVFTLAENENDAEEGSKASQNCVSG
GNFIDTFRHFHPTRTNAFTCWSTRTGARQTNYGTRIDYIFANRLLVERNLLNADIMPEVE
GSDHCPIWAELSCTFVPSPKCPALCTCYMPEFMGKQQKLMRFLVKVSDQKLLPGSQEARE
IRENLNPLESGVSSGSKRPPDGQPESSTFKAKKSKHAKKATKPQGSLLTFFKPKLTPAVS
SSQSLSSYNNTETENTENYVNSCTAAHSMLSVCHTDVQVKGETSNFRVKMTKEEEKGCQD
QIESNATLCEETKRGSCPDFWKSVLHGPPQPPLCTSHNEPCVLRTVKKPGPNLGRQFFVC
ARPQGHTSNPQARCNFFAWVEKRK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacttggaacataaatgggattagaacctttaaaaaagggatcaagtct
gcgcttgacgcgttcggcgctgatataatatgcgtgcaggaaacgaaagtgacgcgcgac
atgttggacgaaaggactgcgattgtggatggatacaacacttatttcagctttagccga
ggacgcactggctattcgggtgtcgcgactttttgtaaagactccgccacccctttctgc
gcggaagaaggactgacaggtcgccttgtcaatcatggagaggctgtgggttgctatggt
gatcaaggagcattctccatagaggagctccagtcacttgacagtgaaggaagagccgta
atcactcagcacaagttaaagcaatcagtgcaaggagaagactctgagactctgactatc
atcaatgtgtattgcccgcgtgcagatccagaaaagccagagagaaagcattttaaactt
cagttttacaaactcctacagattagagctgaggcgattgtggggccacaaagtcacgtg
attattttgggagatataaacacctctcatcagccaatagaccattgtgacccagatgat
gtggagaactttgaggacaatccaggcaggaagtggttggacagctttgtatttacactg
gcagaaaatgagaatgatgctgaggaaggttctaaggcttcccagaattgtgtgtctggt
ggtaattttattgacacatttcgtcatttccatcctacacgcaccaatgccttcacatgc
tggtctacacgtacgggtgctaggcaaaccaactatggcacccgcatcgattatatattt
gctaatcgtttgttggttgagagaaacttgctgaatgcagatatcatgccagaagtagag
ggttctgatcattgtcccatatgggctgagctaagctgtacttttgtacccagtcctaag
tgcccagctctgtgcacctgttatatgcctgagttcatggggaagcaacagaaactcatg
cgctttcttgttaaagtctctgaccaaaaactgttgcctggatctcaagaagctagggag
attcgtgagaacctcaatcctctagaatcaggtgtcagttctgggagcaagagacctcct
gatggacaaccagagtcatctacattcaaagcaaagaaaagcaaacatgctaaaaaggca
acaaaacctcagggcagtctcctgaccttctttaaacctaaactgaccccagcggtatct
tcaagccagagcttaagctcatacaataacactgagacagaaaatacagaaaattatgtc
aacagctgcacagcagcccacagcatgctttcagtatgccacactgatgtgcaagtgaag
ggtgaaacgagtaactttagggtcaaaatgactaaggaagaagaaaagggttgtcaggat
cagattgaaagcaatgccacactctgtgaagagaccaagagagggtcctgcccagacttt
tggaaatcagttttgcatggacctccccagcctccattgtgtacctcacacaacgagccg
tgtgtgctccggactgtgaaaaaacctggaccaaatttgggaaggcagttttttgtatgc
gcccgtccacagggccacacgtccaatccacaggcaaggtgtaatttctttgcctgggtt
gaaaaacgcaagtag
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