Tachysurus vachellii: 132853583
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Entry
132853583 CDS
T09596
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132853583 (gapvd1)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132853583 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF7260
Motif
Other DBs
NCBI-GeneID:
132853583
NCBI-ProteinID:
XP_060737422
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All DBs
Position
11:complement(16865538..16960678)
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AA seq
1453 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCEVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCLHAKVLESTQFVDGYKTLGFQESIFGEFLGRLRENPRLVASCLVAGEKI
IQEHTQGVIHTVFTSLYGNCIMQEDEIYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERFTPTQQERLFGENGS
DSYCQKVQAVVESNQAKLVALVNSFIGYLRQNTYCFPQSLRWIISQMYKSLVQVEGLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADTDDGD
PRRKSNLSKFDKSCVAAFLDVMIGGRTVETPPMSSINLLEGLTRTVFYITNNQLLTMVGF
LRSIAAADQLREEDHVALETLLASVPQSHAVKSNSLELTPHLSPAATPANRRNRLPIAAR
SRSRSNITLDNELEATYQDPQQEVMPEEVLVISLGTSSQTMPGMMPENEVLNLQLSDETQ
GDAPADEVKLHGKPDKTLRFSLCSDNLEGVSEGPSNRSNSVSSLDMEAESVSDLGQGPSV
SNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTEDRDISETVSETWSTDVLGSDFD
PNIDEDRLQEISGAMVENMLGSLLCFPAPGPILLDPCGSTMSETTSEAWSVEVLPSDSET
ADLKQEERLQELESCSGMGSTSDDTEVREVSSRPSTPGLSIISGISATSEDIPNKIEDLR
SECSSDFGGKDSVTSPDGEDSVHGAHGLSCGPAQTDSLLTMFDPLSCGQVTGSGTGTIVR
PKAHYTRPPHPPPDPPIPEACATGPSEPRSSLFSIHEPEHPKQRHSYPERLVRSRSTDVV
FAGRRPNSDPGINRRTMVEDQDQAAAFATGSTTSPSKDSLKVEIDDKKDSDDEKSDRNRP
WWKKRFVPAIPKVLYWTAESEMPAPIAAFRKRDKQEKDDLGSEKVSQDEPSLLGQSCQAQ
AVEDILDKYRNIKRTSPNEGATTATYDVPEMCKEGESEHKLHRNEGLQNFSTDDLTDSAS
QTAQPQDSKFSFSDAKKKLRLALCSADSVVFPIMHTVTRNGLPDHADPEDNEIVCFLKVQ
LAEAINLQDKNQMAQIQETMRCVSRLDPRTCRKLLTAIAEDYRKRAPYIAYLTRCRQGLQ
TSQAHLEKLLQRVLRDKEVANRYFTTVCVRLLLEHMESRMQDFIRAFQGFTAADDKTAAV
EDFLRYLYGAMAHDVIWQYASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQVLQ
EHINRLSKVVSANHKALQIPEVYLKEAPWPSAQAEIRTISAYKTPQDKVQCILRMCSTIM
NLLSLANEDAVPGADDFLPVLVFVLIKANPPCLLSTIQYISNFYANQLSGEECYWWMQFT
AAVEFIKTIDERK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagatattcacactctggcccaccacctgaaacaggagaggctatatgtg
gcttcagagaaacagcttatccagcggctcaactgtgaagtactaaagactgccgaaagg
ctctaccgtgcagcctggatagccaaacaacagaggattaaccttgatcgcctcatcctc
accagtgctgaggcatccccggctgaatgctgcttgcatgctaaggtgttggaaagtaca
cagtttgttgatggctacaagacacttggattccaggagagtatctttggagagtttctt
ggccggctgagggaaaatccacgcctggtggcttcatgtctggttgctggagagaagatt
atccaagagcatacacaaggagtgatccacactgtttttacctcactttatggcaactgt
atcatgcaagaggatgaaatctacctactacaagttctacgttacctagttgagttcgag
cttaaggagagtgataatccacgacgtctgctaaggcgcggcacatgtgcttttagtatc
ctgtttaaactattctctgagggcctgtactctgccaagctgttcctcactgccacctta
catgagcccattatgcagctactggtcgaggatgaagaccacctcgagactgatccagca
aaagtgacagaaagattcaccccaacacaacaagagcgcctctttggggagaatggctct
gattcttattgtcaaaaagttcaggcagttgtagaatccaaccaagccaagcttgtggct
cttgttaattcatttattggctatttgaggcaaaatacctactgcttccctcagagcttg
cgatggatcatatcacagatgtacaaatcactggtgcaagtagaggggctggaggttggg
gaggtgagaaccatgtgcacagacctgttgctaacttgtttcatctgcccagccattgtc
aaccctgaacaatatggaatcatctcagatgctcccattaatgaagtggcacgatttaac
ctaatgcaggttgggcagttgctgcagcagttagccatggctgacacagatgatggagat
cctcgacggaaaagcaatttgtcaaaatttgacaaaagttgtgttgctgcatttttggat
gtaatgattggtggaagaactgtggagacccctcctatgtcttcaattaaccttttggag
gggcttacacgaacagtgttttatatcacaaacaatcagcttctcactatggtgggcttt
ttgcgcagcattgctgctgcagaccagctcagagaggaagatcatgtagctctcgagact
ctgctagccagtgtacctcagtctcatgcagtcaagagcaacagcttggagctcactcct
cacctttcgccagctgctacacctgcaaacaggaggaacagactaccaatagcagcccgt
agccgctcccgctccaacatcactctggacaatgagttggaggctacctaccaggaccct
cagcaggaagtcatgcccgaggaggtgcttgtcatctcattaggaacttcctctcagact
atgcctggaatgatgcctgaaaatgaggtgttgaacttgcaactttcagatgaaactcaa
ggagatgccccagctgatgaggttaaactacatggcaaacctgacaaaaccctccgcttc
tctctttgcagtgacaatctggaaggagtctctgaggggccatctaaccgctccaactct
gtctcatccctggacatggaagcagaatctgtgtctgacttgggccaaggaccatctgtc
agcaatggtgttgaagctttgcagctgctggaacatgaacaagccaccacacaagataat
ctggatgataaactcaggaagtttgagattcgggacatgatgggtctgacagaagatcgg
gatatctctgagacagttagtgaaacctggagcactgatgttcttggtagtgactttgac
cctaatatagatgaagacagacttcaggaaatatcaggggctatggtggaaaacatgctg
ggtagtctgctgtgcttcccagcacctggccctattcttttggacccctgcggttcaaca
atgtctgaaaccacaagtgaggcctggagtgtggaagtcttgcccagtgattcagaaact
gcagatttaaaacaagaggagcgcttacaggagttagaaagctgttcaggcatgggaagc
acttcagatgacactgaagtcagagaggtcagctcccgaccaagtacccctggattaagc
atcatctcaggtattagtgcaacatctgaagacattcccaacaagattgaagacctacgc
tcagaatgtagctcagattttggaggcaaagactctgtcacaagcccagatggagaggat
tctgtgcatggagcccatggtttgtcctgtggtcctgctcaaactgattctctgctgacc
atgtttgatcccctctcctgtggacaagttactggttcaggtactggcaccatagttcga
cccaaggcacactacaccagaccccctcatccacccccagacccaccaatcccagaagct
tgtgccacaggaccttctgaaccaaggtcatctctcttctccatccatgaaccagagcac
cctaagcagaggcactcataccctgagcgtctggttaggagccgtagcacagatgtagtc
tttgcaggtcgcaggcccaacagtgatccaggcataaaccgcaggaccatggtggaggac
caggaccaagcggctgcttttgctactggctccaccacctccccaagcaaagattcactt
aaagtggagatcgatgacaagaaggacagtgatgatgagaaatcagacaggaatagaccc
tggtggaagaaacggtttgttcctgccattcctaaagtgctctattggaccgcagagagt
gaaatgccagcgcccattgcagcattccgaaagcgggacaagcaggaaaaagatgatctg
ggatcagaaaaggtctctcaagatgagccttcattactggggcagagctgtcaggctcag
gcagtagaagacatattggacaaatacaggaacatcaaaagaaccagcccaaatgaggga
gcgacaacagccacctatgatgtaccagaaatgtgtaaagagggtgaaagtgaacataaa
ctccatagaaatgagggcctgcagaacttctctacagatgacctgacagactctgccagc
cagacagcacagcctcaggacagcaaattttcctttagtgacgctaagaaaaaattacgt
ctggctctgtgctctgcagattctgttgtttttcctatcatgcacactgtaacacggaat
ggcctccctgaccatgcagatcctgaagacaatgagattgtgtgctttctgaaagtgcag
ctggcagaggctattaacttgcaggataaaaaccagatggctcagattcaggagaccatg
cgctgtgtcagtcgccttgacccacgtacctgcagaaagttgctcacagcaattgctgag
gactacagaaagcgggctccatacatagcgtatttgacacggtgccggcaggggctgcag
acttctcaggctcatctagagaagctgttgcagagagtacttagagataaagaagtggcc
aaccgctattttactactgtctgtgtccgactgcttctagaacatatggagtccagaatg
caggactttatcagagcatttcagggcttcactgcagctgatgataagactgcagcagtg
gaggattttctgcgttacctctatggtgctatggcacatgatgtcatctggcagtatgcc
agtgaggaacagctacaggatgctcagatggctattgagcggagtgttatgaaccgcata
ttcaaactggctttctacccaaaccaggatggagacattctgcgagaccaggttctgcaa
gagcatattaatcgtctgtccaaagtagtgagtgccaaccacaaggccctccaaatccca
gaggtttatctgaaagaggctccatggccttctgctcaggcagagatcaggacaatcagt
gcatacaagaccccgcaggacaaagtgcaatgtatcttgcgcatgtgctctaccatcatg
aatctgctcagcttggctaatgaagatgctgtgcctggagctgatgactttctccctgtg
cttgtatttgtccttataaaggcaaacccaccctgccttctgtccactattcagtacatc
agtaatttctatgccaatcagctgagtggggaggagtgctattggtggatgcagttcaca
gctgctgttgaatttattaaaaccattgatgagcgcaagtga
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