Tachysurus vachellii: 132853654
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Entry
132853654 CDS
T09596
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132853654 (cxxc1a)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132853654 (cxxc1a)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132853654 (cxxc1a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
132853654 (cxxc1a)
COMPASS/SET1 complex (yeast)
132853654 (cxxc1a)
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
132853654
NCBI-ProteinID:
XP_060737544
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Position
11:3711957..3719177
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AA seq
594 aa
AA seq
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MDSETSKFGPRSGPEMSMNQDNAPVYCICRRPDINCFMIGCENCNEWFHGDCINITEKMA
KSIKVWYCEKCRSKDDSLEIKYRFKKSRDRESDGDEMERQLENDMIDFKNDRRRGSRVKR
QNLVKMIWSLVFCKNEMQIVLMRSQIKRSARMCGECEPCMRTEDCAQCDFCKDMKKFGGP
NKIRQKCRLRQCEVRARKMLRVKEEEMSMSKGRDRFQNDYSMSDEYSENELELYQQYCAG
KYADHGWNSDEDDLDPNMRKRAVKVKHVKRREKRSEKKKEENKPRKHKPKQKHRDKVRHS
ERTESRDSGEFRQCLGPGCVEAARQNSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCI
AEEQGKKLLERIRREQQLARTRLTDMEKRFHELEGIIAKAKQQVVQHDEEVNEGDDDTDL
QIFCVSCSHPVNPKVALRHMERCYSKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYC
KRLQVLCPEHSRDPKVPADEVCGCPLVRDVFEPTGEYCRVSKRKCNRHYCWEKLRRAEVD
LERVRVWYKLDELFEQERNVRIAMTNRAGLLALMLHQTIQHDPHSTDLRASKDR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgagacttcaaagtttggccctcgttcaggaccagagatgagcatgaatcag
gacaacgctccagtttactgcatctgtcgcagaccagacatcaactgcttcatgatcggt
tgtgagaactgtaatgagtggtttcatggcgactgcattaatataaccgagaagatggca
aaatccattaaggtgtggtactgtgaaaaatgtcgcagtaaggacgattctttagagatc
aaatatcgtttcaagaaaagccgggacagagagtcggacggagacgaaatggagcgacag
cttgagaacgacatgatcgattttaagaacgatcgtcgacgtgggtcacgggtaaagcga
cagaatctcgtgaagatgatttggtcgttagtgttttgcaaaaatgaaatgcagattgtt
ttaatgcgctcacagatcaagcgctcggcgcgcatgtgcggggagtgtgagccctgcatg
cggacagaggactgcgctcagtgtgacttctgtaaggacatgaagaagttcggcgggcct
aacaagatcaggcagaagtgcaggctcaggcagtgtgaagtgcgcgcccggaaaatgctg
cgagtgaaggaggaggagatgtccatgtcgaaaggccgagatcggttccagaacgattac
tccatgtcggacgagtacagcgagaacgagctggagctctaccagcagtactgcgccggg
aaatacgccgaccacggatggaacagcgacgaagacgacctcgatcccaacatgcgaaag
cgagccgtgaaagtcaagcacgtgaagaggagagagaagcgatctgaaaaaaagaaagag
gagaataaaccacgcaaacacaaaccgaagcagaaacaccgggacaaggtgcgacacagt
gagaggacagaatctcgagacagcggtgaattcaggcagtgcctcggtccaggctgcgtc
gaagcggcacgtcagaactccaagtactgctccgatgactgcggcatgaagctggccgcc
aaccggatctacgagatcctccctcagcgtatccagcagtggcagcagagcccgtgcatc
gccgaggaacagggaaagaagcttctggaacgcatccggcgtgagcagcagttagcccgg
acacggcttacggatatggagaaacgatttcacgagctggagggaatcatcgctaaggca
aagcagcaggttgtgcagcatgatgaagaggtgaacgaaggagacgacgacacagacctt
caaattttctgcgtctcctgcagtcacccggtcaaccccaaggtggcgctacgtcacatg
gagcgatgttactccaagtacgagagtcagacatcgttcggctctatgtatcccacacgc
atcgagggtgcaaccaggttgttctgtgatgtatacaatcctcaaagcaaaacctactgt
aaaaggcttcaggttctgtgtcccgagcactcccgagatccaaaggttccagcggacgag
gtgtgtggatgtcctctggtgcgtgacgtgtttgagcccacgggtgaatattgccgagtg
tccaaacgcaagtgcaacagacattactgctgggagaaactccggcgggccgaagtggac
ctggagagagtgcgagtgtggtacaagttggatgagttgtttgaacaggagcgtaatgtc
cgtatagcgatgaccaatcgcgcaggtctcctggcgctcatgctacatcaaacgattcaa
cacgacccacattccacagacctgcgcgccagcaaagacagatag
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