KEGG   Tachysurus vachellii: 132853694
Entry
132853694         CDS       T09596                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132853694 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvc03041]
    132853694 (sf3a1)
Spliceosome [BR:tvc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132853694 (sf3a1)
 Complex B
    132853694 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    132853694 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Toprim_Crpt Ubiquitin_2
Other DBs
NCBI-GeneID: 132853694
NCBI-ProteinID: XP_060737607
LinkDB
Position
11:26538967..26544536
AA seq 780 aa
MVQINQPEANKADEQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQN
EINNPKFNFLNPSDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQSLQQAQQHLPQKVQ
AQVIHETVVPKEPPPDFEFMADPPSISAFDLDVVKLTAQFVARNGRQFLAQLMQKEQRNY
QFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLQKLKREADNQREVLDQVKYRVEWAKYQ
ERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQER
YEKYGESEEVEMEVESEDEEDQRDARDNGHTAQPDQDTQLQDMDEGSDEDEDSMKAPLPP
ENPMPPPLPPTPDQVIIRKDYDPKASKMQAVVPPGDEFLISPITGERIPASKMQEHMRIG
LLDPRWLEQRDRNLRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEE
IQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDETKEKIGPSKPHE
NMPLPLPTSVQTMSKPSPPISTIPRPPTSLPPPVRTTLLSAVPVIPRPPVVRLAPSQVLA
PMPPMVHAPRINVVPMPPAAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPMPPAHPP
AHHEDEPVSKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNFTLPL
TDQVSVIKVKIHEATGMPAGKQKLQFEGIFIKDSNSLAYYNMNNGSLIHLALKERGGRKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggtgcagattaatcagccggaggctaacaaggccgatgagcagaaggaggaaactccg
gccactaaacccatcgtggggatcatttaccctcctcctgaagtgcgcaacatcgtggac
aagaccgccagcttcgtagccaggaacggacccgagtttgaagcgaggattcgtcagaac
gagatcaacaaccccaagtttaatttcctgaaccccagcgacccgtaccatgcctactac
cgccacaaggtcaacgagttcaaggagggcaaaggtcaggagccgtcggccgccgtgccg
aaggtcatgcagcagcagtccttgcagcaggcgcagcagcatctgcctcagaaggtccag
gcgcaggtcatccacgagacggtggttcccaaagagcctccgcccgactttgagttcatg
gccgacccgccctccatttcagccttcgacctggacgtggtgaagctgacggcgcagttt
gtggcccgtaacggacgccagttcctggctcagctcatgcagaaggagcagaggaactac
cagtttgacttcctgcgtccgcagcacagcctcttcaattacttcactaaactggtggaa
cagtacaccaagattctgatccctccaaaaggactcctgcagaaactgaagagggaggcg
gacaatcagagggaggtcctcgatcaggtgaagtaccgagtggagtgggccaagtaccaa
gagcgagagaggaagaaagaggaggaggagagggagaaagagcgtgtggcgtacgcacag
atcgactggcacgactttgtcgtcgtggagacggtggacttccagccaaatgaacaaggg
aacttccctcctcccaccactccagaggaacttggagctcgaatcctgatccaggagcga
tacgagaagtacggagagagcgaggaggtggagatggaggtagagagcgaggacgaggaa
gaccagcgagatgccagggacaacggacacacggctcagccagaccaggacacacagcta
caggatatggacgagggttcggatgaagacgaggactcgatgaaggctccacttcctcct
gagaaccccatgcctcctcctctgcctcctactccagaccaggtcatcatccgcaaagac
tacgaccccaaggcctctaagatgcaggctgtagtgccaccaggtgacgagttcctcatc
tctccgatcaccggtgagagaatcccggccagtaagatgcaggagcacatgcgtatcggg
ctgctggacccgcgctggctggagcagcgagaccgcaacctccgagaacgacagatcgaa
gaggaggtgtacgctcccggcctggacatcgagagcagcctgaagcagctggccgagaga
agaaccgatatcttcggtgtggaagaaaccgccattggtaagaagatcggagaggaagag
atccagaaacccgaggagaaggtgacgtgggacggtcactcaggcagcatggcgcgtacg
cagcaggccgctcaggcaaacatcacactgcaggagcagatcgaagccattcacaaggct
aaaggtctggtgcaggaggacgagaccaaggagaagatcggaccgagtaaaccccatgag
aacatgccgctgccgctgcccaccagtgtgcagaccatgtccaagcccagcccacccatc
agcaccatccccagaccgcccacttcactccctccccctgtgcgcaccaccctgttgtct
gctgtgcccgtcatcccgaggcctcctgtggtgcgcttggcccccagtcaggtcctggcc
ccgatgccccccatggtacacgctcctcgcatcaacgtggtcccgatgcctccggctgca
ccccacatcatggctcctcgacctcctcctatggtggttcctgcagcgttcgtacctgct
cctccggtgccccagccacccagctctgcccctgcccccatgccccctgcccaccctcct
gcccatcacgaggacgaaccggtgagcaagaagatgaagacggaggacaacctgatacca
gaggacgagttcctgcgcagaaacaagggtcctgtcgcagtcaaggttcaggttcccaac
atgcaggacaagacagaatggaagctgagtggacaagtgctgaacttcacactgccgctt
acagaccaggtgtcagtcataaaggttaagatccacgaggccaccgggatgccggccggc
aaacagaaacttcagttcgaggggatttttatcaaggattcgaactctctggcctactac
aacatgaacaacgggtcacttattcacctggcgctgaaggagagaggagggaggaagaag
tag

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