Tachysurus vachellii: 132853866
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Entry
132853866 CDS
T09596
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tvc
Tachysurus vachellii
Pathway
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132853866 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132853866 (xpc)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132853866 (xpc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
132853866
NCBI-ProteinID:
XP_060737868
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Position
11:complement(7521574..7532169)
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AA seq
904 aa
AA seq
DB search
MAKHKHRADAVVTEKERKKEKSRCVKKRKAAAKTPSIKDKGTKAKNIAKSTKPRGQASKK
AHKPTDGQKSKYFSEPLKEEPEDFEESSMSLPENSVLKSTDYKIKEEKKENESEESDEDE
DWEEVEELAGPLGPAVEDQEPAVPSQPVEIEIETTEARHKRQKKEKQKAEFETYLRRMMK
RFNKDIQEDTHKVHLLCLLASGLFRNRMCCEPDLLAITLSLIPAHFSMVIKKRINTVFLE
SLLTWFKETFTLNRALPEEKDLGLRELLERRLGSLSARDHQEMTYLFLLVLRSLHIYCRL
VLSLQPLPFKPPTKKGKAETSSSPPSKEKSNKADKKPPEPKVSTGSKRPSSSSTEGQPKR
GGKRQKRNVEDGGDKEKEAGGGQRPKNTKRRSTASKVSYKEDSSEGEEELSEEDEFHLSS
EDDSDNSECGGKKSNKNSKAKGKGKSHAPRRSSKIKKRTKEEEEEEEEEDLEEELQWKKQ
RGKRRQGKGDDEWIEVYLKGAKRWICIDVDQGVGQPELCSNQATHPITYVVGVDEHGYLK
DVSSRYDPTWLTASRKRRIDSEWWEETLRFYECPDSEQKKEEDEELQEKLMGQPLPKAIS
EYKNHPLYALERHMLKYEALYPSTATILGYCRGEAVYSRDCVHTLHSRDTWLKQARTVRP
GEKPYKMVKGFSNRSRKVRMMSENKDEKDLPLFGPWQTEEYQPPVAINGKIPRNEFGNVY
MFQPCMLPVGCVHLHLPNLNRVARKLNLDCATAVTGFDFHGGYSHAVTDGYIVCKEHEEI
LKAAWENEQEIQKKKEQEKREKRALANWKLLVKGLLIKERLQQRYGQQGMAKDTGIAKGG
EEAAEGFSSGEEDEGGAHTAPPSLTVSWPQNRQVEPEEGGAKKSVSKRERRGQQKHLFPF
EKRV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacataaacacagggcagatgctgttgtgactgaaaaggagcgcaaaaaggag
aagagtcgttgtgttaagaagagaaaagctgctgccaaaacgccgagcatcaaagacaag
ggtaccaaagccaaaaatattgccaagtccaccaagcccagaggccaagcttcaaaaaag
gcacataagccaacggatggacagaagagcaaatacttcagtgagccattaaaagaagag
cctgaggactttgaagaatcaagcatgtcccttccagagaactctgtgctaaaaagcacc
gattacaagataaaagaagagaaaaaagaaaatgagagtgaagagagtgatgaagatgag
gattgggaggaagtggaagaactggcaggaccattaggaccagcagtggaagaccaagaa
cctgcagttccttctcagcctgtggagattgagattgagacaactgaggccagacacaaa
agacagaaaaaggagaagcagaaagctgagtttgagacttacctgcgcagaatgatgaaa
cgtttcaacaaggatatacaggaggatacacacaaggtccatctgttatgtttattggct
agcggactgttccggaaccgcatgtgctgtgagcctgacctactggccatcaccttgtcc
ttaattcctgcccacttctccatggttattaaaaaacgtatcaacactgtctttctggaa
agtcttctgacgtggtttaaagagacgttcacactaaaccgtgccctccctgaagagaag
gacctgggactgcgagagctgctggagagacgtttgggaagtctgtctgcacgtgaccat
caggagatgacctacctgttcctgctggtgctgaggtcactgcacatctactgtcgattg
gtgctgtcactacagccattacccttcaagccaccaacaaaaaagggaaaagcagaaacc
tccagcagtcctccttctaaagagaagtcaaacaaagctgataaaaagccaccagaaccc
aaagtttccacagggtccaaacgcccatcctcttccagtactgaggggcaaccgaagagg
ggaggaaagagacagaaaaggaatgttgaggatggaggtgacaaggagaaagaagcagga
gggggacaaaggccaaaaaacaccaaaagaaggagtactgcatcaaaagtttcatataaa
gaagatagcagtgagggggaagaggagcttagtgaagaggatgagtttcatctgtccagc
gaggatgacagcgataattcagaatgtggtggaaaaaagtccaacaagaattcaaaggct
aaaggaaagggcaaaagtcacgctccacgacgatccagcaagatcaagaagagaacgaag
gaggaggaggaggaggaagaagaagaagacctagaggaggagctacaatggaaaaagcag
cgagggaaaaggaggcaggggaaaggagatgatgaatggatagaggtgtacctgaaaggg
gcaaagagatggatatgtattgatgttgatcaaggggtggggcaaccagaactctgctct
aatcaggccactcatccaattacatatgtagtgggtgtagatgaacacggttacctgaaa
gacgtgagcagcagatacgaccctacctggctcacggcatcacggaaacgacgcatcgac
tcagagtggtgggaggagacgttgcgcttttacgagtgtcccgattctgaacaaaagaag
gaagaagatgaagagctgcaggaaaagttgatgggtcagccattgccaaaagccatatct
gagtacaaaaaccatcctctgtatgcactggagagacacatgctgaagtacgaggccctg
tacccttccactgccaccattctgggctactgtcgaggagaagctgtctattcacgggat
tgtgttcacacactgcattcaagagacacgtggttaaagcaagcgcgcactgtccgaccc
ggggagaagccttacaagatggtaaagggcttctcaaaccggtcccggaaagtcaggatg
atgtctgagaacaaagatgaaaaggacctacccctgttcggcccctggcagaccgaggag
tatcagcccccagtagccatcaacggcaagattccacgtaatgaatttggaaacgtgtac
atgtttcaaccgtgtatgctgccagtgggatgtgtgcacctacatctgcctaatctgaac
agagtggctcgaaaactcaacctggattgtgctactgctgtaacaggcttcgatttccat
ggaggatattcacatgctgtaactgacggctacattgtgtgtaaggaacatgaagagatt
ctgaaagctgcctgggaaaacgagcaagagattcaaaagaagaaggaacaagagaagcgt
gagaagcgagcgctggctaactggaagctgctggtgaaagggctgctgattaaagagcgg
ttgcagcagcgttacggacagcagggcatggccaaggacacgggcattgcaaaaggcgga
gaagaagcagcagagggattctcatctggagaggaggatgaaggtggagctcacacggct
ccaccatctctgaccgtttcatggccacagaataggcaagtggagccggaagaaggagga
gctaaaaagtctgtcagtaagagggagagacgtggccagcagaaacatctcttccctttt
gaaaaacgtgtgtaa
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