Tachysurus vachellii: 132853875
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Entry
132853875 CDS
T09596
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132853875 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132853875 (mbd4)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132853875 (mbd4)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
132853875 (mbd4)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132853875 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
132853875
NCBI-ProteinID:
XP_060737880
LinkDB
All DBs
Position
11:complement(19906769..19914615)
Genome browser
AA seq
374 aa
AA seq
DB search
MLKVENISCSCIMDQLKQTCQGFICSGVKLIPDTGADHEMDASTEQMDTSLPPGWTRETR
QRKQGKTAGKMDTYIISPQGKRFRSKAALQKYLLSEECVHLNLDAFEFSPKTKAQSQKSN
SDKPKQKERKARRRKDQLQEINSNEEEQTGIEGKMEETSSSVRENRTDAVPVIMVQEASE
SEGESDNQQINAARAGISSPVRNSQNEKRRTSPYFKRKNDGLTPPKRKAFRKWTPPRSPF
NLVQETLFHDPWKLLVATIFLNRTSGKLAIPMLWQFFERYPSAEVTRSSDWKPLADLMQP
LGLNSLRAKTLVRFSDEFLTKSWRYPEELYGIGKYGNDSYRIFCVGEWRQVTPKDHKLNK
YHAWLWENHKKLGI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggttgaaaatatatcttgcagctgcattatggatcagttgaagcagacctgt
caaggcttcatatgctcaggagtaaagctgattcctgacacaggtgctgaccatgagatg
gatgccagtacagagcagatggacacgtcgctccctcctggatggaccagagagaccaga
cagcgaaagcagggcaagacagcaggcaagatggatacttacattatcagtcctcaaggt
aaacgcttcagatccaaagcagcacttcagaagtacctgctctctgaggaatgtgtccat
ctgaacctggacgcttttgaattcagcccaaaaaccaaagcacagtctcaaaaatcaaac
tccgataaaccaaaacaaaaagaacgaaaagcaaggaggagaaaagatcagttgcaagaa
ataaatagtaacgaggaagaacaaacaggcatcgagggcaaaatggaggaaacatccagc
agcgttagagaaaacagaactgatgctgtgcctgtcattatggtgcaggaggcatcagag
agcgaaggagagagtgacaaccaacaaattaatgcagctagagcggggatcagttcacct
gtcagaaactcccaaaatgagaagcggcgaaccagtccatactttaaaagaaagaatgat
ggtctcactcctccaaagcgtaaagcgttcagaaagtggactcctccacgttcccccttc
aatctggttcaagaaaccttgtttcatgacccgtggaagcttttagtggccaccatcttt
ctcaacagaactagcgggaaattggctattcctatgttgtggcagttttttgagcgttac
ccgtcggctgaggttacacggtccagtgactggaagccactagctgatcttatgcagcca
ctcggtctcaattccctacgagccaaaactctcgtccgcttctccgacgaatttctcact
aagtcatggcgatatcctgaagagctctatggcatcggcaaatatggaaacgattcgtat
cgtatattctgtgtgggagaatggagacaggtcaccccaaaagaccacaagctgaacaag
tatcatgcatggctgtgggagaaccacaagaaattaggcatctga
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