Tachysurus vachellii: 132854031
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Entry
132854031 CDS
T09596
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132854031 (smarcad1a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132854031 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
CUE
ERCC3_RAD25_C
DUF1810
HHH_3
Cac1_C
Motif
Other DBs
NCBI-GeneID:
132854031
NCBI-ProteinID:
XP_060738132
LinkDB
All DBs
Position
11:complement(13010763..13024772)
Genome browser
AA seq
991 aa
AA seq
DB search
MSLFNLERFRYQKEKTVENLSSSVSSPKAEHRRLVNNCRSDKENYPERRVKPDGRRGRGK
IPRHALEDVSSDDEACKKARVPTMHSSARNATGCEKQTDLEMEDKLTKLLEMFPQRNRRE
LLEVVNSTSTLEGAVAYCLVAYKDKDLSKTKGSTTHSDGDEMQPKKRRKTAEPDFESEEE
NHEPSREKQDALVHNLKKKFPQMDKVVLRDVLREHEWDYENALGSLLMFSFDSESSPEKI
KKTKSKQSSNSKPSKSRQESSEDGKQKPESSSLTRWLSAVSSKSPSRLQSLSTRSPSRGS
RTVSHKSERKEEKREPEPNKDSELDSDSELDSEDEDDASDEFDLEAVDHKFSSKVQEQIL
QFFQEASVDELNLISGCSLKKAQKIISLRPFNTWKDVNKQFYKDNGLSMDLVYSCKDVLK
ERQVLKQLMNKCASIAKNMTKDVTNVIENCMGSMKQPTNLNKKLKLQPYQLIGLKWLILL
HQHNLSGILADEMGLGKTIQAISFLAYLYQKGIKGPHLITVPSSTVDNWVRELALWCPSL
KVIVYYGSVEERKYLRHDILNNQVEFNVIVSTYNLTIGNENDRSLFRKLKLQYAVFDEGH
MLKNMNSLRYRHLMAIRAEQRLLLTGTPLQNNLLELISLLNFIMPSMFSSSTSQISKMFS
TKSSEEESSFHKERIAQAKLIMKPFILRRVKSEVLKELLPKVEKIKMCPMSDAQQQLYDD
LFRRLKKTVKTGEKRELSNVMMQLRKMANHPLLHRQYYTTEKLEAMSRAMLKEPTHFDAD
PELIQEDMEVMSDFELNNLCKEYSSISKFQLDKELILDSGKFSLLTKLLAKLKEKGDRAV
LFSQFTMMLDIVEVLLKHLGHQYVRLDGSTPMTERIGLIDKYNTDPEIFVFLLSTRAGGQ
GINLASANVVILHDIDCNPFNDKQAEDRCHRMGQRRTVQVIKLVSKDSIEACMLRVGQEK
LKLEQDMTTDDGEEGSMSEDVAELLKVSLGF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcaacctcgaacgattccgatatcaaaaagagaagacggttgaaaatctg
tcgtcgtcggtcagttcacccaaagcagagcaccgcagactggtgaataactgtaggtca
gataaggagaattacccagaacgcagagtgaaacccgatggcagacgaggaagagggaaa
atcccacgccatgcactggaggatgtgtcctctgatgatgaggcctgtaagaaggcaagg
gttcctacaatgcactcatcagcgaggaatgctacagggtgtgaaaagcagacagatctt
gagatggaagataaactgaccaagcttctggaaatgttccctcagaggaacagaagagaa
ttgctggaggtggtgaacagtaccagcacactggagggcgctgtagcgtattgtctggtg
gcctacaaagataaagatttgtccaagacaaaaggcagcaccacacacagtgatggtgat
gagatgcaaccaaagaagcggagaaaaaccgccgagccagattttgagtctgaagaggag
aaccatgagccgagcagagaaaagcaagatgctctggttcacaatttaaaaaagaaattt
ccgcaaatggataaagtggtgctgagagacgttctgagagagcatgagtgggattatgaa
aatgccttgggatcattgcttatgttttcattcgattccgagtctagccctgaaaagatc
aagaagacaaagtccaaacaatcaagcaattcaaagccttctaagagcagacaagagagc
agtgaagatgggaagcaaaaacctgaatcttctagtttgacacggtggctatcagctgta
tccagtaaatctccttcaagactacagtccctttccaccagatcaccgtcaagaggaagc
agaacagttagtcataagtctgaaagaaaagaagagaagagagaacctgaaccaaacaaa
gactcagaacttgatagtgactcggaacttgatagcgaggatgaggatgatgcttctgat
gaatttgacttagaagctgtggaccataaattttcttccaaggtccaggagcagatattg
cagttcttccaggaggcttcagtggatgaattgaatttgatatctggctgctcattgaaa
aaagcccagaaaataatttcacttagaccatttaacacatggaaagatgtgaataagcag
ttctataaggataatggcttgtctatggatttggtatatagctgtaaggatgtgctgaag
gaaagacaagtactgaaacagctcatgaacaagtgcgcaagcatagccaagaacatgacc
aaagacgtaaccaatgtcatagaaaattgcatgggctccatgaagcagccaaccaacctc
aacaagaagttgaaattacaaccatatcagctgataggcttgaagtggcttattctctta
caccagcacaatctcagtgggatcctggctgatgagatgggcttaggaaagacaattcag
gcaatttcatttttggcttatctttatcagaaggggattaaaggacctcacctaatcact
gtaccctcttccacagtggataactgggtaagagagctagcactgtggtgtcccagcctg
aaggtcattgtttattatggctctgtagaggaacgtaaatacctccgccatgatattctc
aacaatcaagtggaatttaatgtcattgtgtctacatataacttgactataggcaatgaa
aatgaccgcagtctcttccgcaagttgaagttgcagtatgctgtgtttgatgagggtcac
atgttgaaaaacatgaactcgctacgctaccgccatctcatggccatccgtgctgaacag
agattgttgctcactggaacacctttacaaaacaacctactagaactcatctctctgctc
aacttcattatgccctccatgttctctagcagcacttcacagatttccaagatgttctcc
acgaaatcgtcagaagaggaaagtagtttccataaagaaaggattgcccaagccaagctc
atcatgaagcccttcatcttgagacgagtcaagagtgaggtgctgaaagaactactgccc
aaggtggagaagatcaaaatgtgtcccatgagtgatgctcagcagcaactgtatgatgat
cttttccgaaggctcaagaagactgttaagactggagagaagcgagagctgagtaatgtg
atgatgcagttaagaaagatggccaaccatccactgttgcaccggcagtactatactaca
gagaagcttgaggccatgagccgagctatgctgaaggaaccaacacattttgatgcagac
cctgaattgatccaggaagacatggaggtgatgtcagactttgagctgaataatctttgt
aaggaatacagctctatttccaagtttcagctggataaagagctcattctggactctgga
aagttttccctgcttactaagttattagccaagctcaaggagaagggtgatagagcagtg
ctctttagccagttcaccatgatgctggacattgtggaggttctgctgaaacaccttggt
caccagtatgttcggctggatggctccactcctatgacagaaagaattggcctcatagac
aaatacaacacagaccctgaaatatttgtcttccttctgtcaactcgtgctggtggccag
gggatcaacctcgcttctgctaatgtagtaattcttcatgatatcgactgcaatcctttc
aatgacaaacaagcagaggaccgctgtcatcgaatggggcagcgcaggaccgtgcaagtt
ataaaactggttagtaaagattccatagaggcctgcatgcttcgtgtagggcaggagaaa
ctcaaacttgaacaagacatgactactgatgatggtgaagagggctccatgtcagaggat
gtggctgagctgttaaaagtatcacttggcttttga
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