Tachysurus vachellii: 132854040
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Entry
132854040 CDS
T09596
Symbol
ybx1
Name
(RefSeq) LOW QUALITY PROTEIN: Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132854040 (ybx1)
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132854040 (ybx1)
03041 Spliceosome [BR:
tvc03041
]
132854040 (ybx1)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
132854040 (ybx1)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
132854040 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
132854040 (ybx1)
Spliceosome [BR:
tvc03041
]
Common components
Common spliceosomal components
General mRNP proteins
132854040 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
132854040
NCBI-ProteinID:
XP_060738146
LinkDB
All DBs
Position
11:20408777..20414129
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AA seq
387 aa
AA seq
DB search
MMTNSSTNPEKELDVXSGISSSVFTKSVQFDRQRERKEESREPEGSSPHHRRPRLPSSTG
XKNTLESHRRLYQQETTMSSEAETQQPPQPADDVESPSSPAAAATAGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPDGVPVQGSKYAADRNRYRRYPRRRGPPRDYQDNYPSDGEGDKREAGDSAGEADQQ
QQRKPTFPGRRRYPPYYVRRRYGRRPPYSSAPTRGEMTEGGEGDEIQGGQDQGNKPVREN
YYRGYRPRFRPRGPPRPRPAREGEEDKENQGEGGQNQEPRQRRYRRNFNYRRRRPQSTKP
QDGKDGKAADASTDKSAAPEAEQGGNE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaactcctcaaccaatccagagaaagaattggatgttngctcaggaatatcc
tccagtgtctttactaagtccgtccagttcgatcggcaacgggagcggaaagaggaaagt
agagagcccgaaggcagtagcccccaccaccgccggcccaggttaccatctagcaccggg
nnaaagaacacactagagagccaccgccggctttaccaacaagaaaccaccatgagcagc
gaggccgaaacacagcagccaccgcagcctgccgacgacgtggagagtccatccagcccg
gcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaggtcctggggacagtg
aagtggttcaacgtaagaaacggctatggtttcatcaacaggaatgacacaaaagaagac
gtctttgtacaccagactgcgataaagaagaacaacccaaggaaataccttcgcagtgta
ggggatggagagactgtggagtttgatgtggttgaaggagaaaagggtgcagaggcagcc
aacgttactgggccagatggcgtgcccgttcagggtagcaaatatgcggccgacaggaac
cggtacagacgctacccacgtaggaggggccccccacgtgactaccaggacaactaccca
agtgatggagaaggagacaagagggaggcaggagacagtgccggtgaagctgatcagcag
cagcagcgcaagcccaccttccctggcaggaggcgctaccccccatactacgtgagaaga
cgctatggccgcagacctccctacagcagtgctccaaccagaggagagatgactgagggc
ggggaaggcgatgaaatccagggtggtcaagaccagggcaataaaccagtgagagagaat
tactacagaggctaccggccaaggttcagaccaagaggaccacctcgaccccggcctgca
cgggaaggggaagaagataaggagaaccagggtgagggtggtcagaatcaggagccccgg
cagcgccgctaccgccgcaacttcaactatcgccgcagacggcctcagtccaccaagccc
caggatggcaaggacggcaaggcagccgatgcatcaaccgataaatcagccgctcccgag
gccgaacagggcgggaatgagtag
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integrated database retrieval system
