Tachysurus vachellii: 132854114
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Entry
132854114 CDS
T09596
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tvc
Tachysurus vachellii
Pathway
tvc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132854114 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132854114 (msi1b)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132854114 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132854114
NCBI-ProteinID:
XP_060738271
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All DBs
Position
11:27037312..27056278
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AA seq
345 aa
AA seq
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MDSDGTQSSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFG
FVTFADQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIDD
VKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKA
QPKEVMSPAGSSRGRARVMPYGMDAFMLGIGMLGYPGFQAATYTGRSYASITPGYTYQFP
EFHLERTPLLTSPHPPELTAIPLTAYNPMAAAAAAAAVVRGSAPSRSAGFLSTSSPGPMA
ELYGTASQESTVSSYISAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacggcacacagagctcggattccccacacgacccctgtaaaatgttcatc
ggcggtttgagctggcagacaactcaagagggtctgaaggattatttctgtaaattcggt
gaagtgaaggagagcatggtgatgcgagatccggtcacgaagcgctccaggggctttggg
tttgtcacgtttgccgatcaggccggtgtggataaagttctggctcaaacccgacacgag
ctcgactctaaaacgatcgatccgaaagtggcgttccctcgtcgagctcagccgaagctg
gtgacgagaacgaagaagatctttgtgggaggattatcagtgaacaccaccatcgacgac
gtaaagcagtacttcgaccagttcgggaaggtggatgacgccatgttaatgttcgataaa
accaccaacagacacagaggttttggctttgtgacgtttgagaacgaggatgtggtggag
aaggtgtgtgagatccacttccatgagatcaacaataagatggtggagtgtaaaaaggct
cagcctaaggaagtgatgtcaccggcagggtcctccaggggcagagcgagggtcatgccc
tacggcatggacgccttcatgctgggaatcggcatgctgggttatccaggatttcaggca
gcaacctacaccggccgcagttatgcctcaatcactccaggatacacgtaccagttccca
gaattccacttagagaggacccccctcctgacttcaccccaccctcccgaactcacagct
atccctctgacagcgtataaccccatggcagcagcggcggctgcagcagctgtggttaga
ggctccgccccctctcgctcagctggctttctaagcaccagcagtcctggaccaatggca
gagctttatggaacagccagtcaggaatcaacagtgagcagttacatcagcgctgcaagc
cccgcccccagcaccggcttcagtcacagcctcgggggtcctctgatcgctacagcgttc
actaacggctatcactga
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