Tachysurus vachellii: 132854386
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Entry
132854386 CDS
T09596
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
tvc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132854386 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132854386 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132854386 (vcp)
03009 Ribosome biogenesis [BR:
tvc03009
]
132854386 (vcp)
04131 Membrane trafficking [BR:
tvc04131
]
132854386 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132854386 (vcp)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132854386 (vcp)
Ribosome biogenesis [BR:
tvc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132854386 (vcp)
Membrane trafficking [BR:
tvc04131
]
SNARE
SNARE associated proteins
Others
132854386 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132854386 (vcp)
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132854386 (vcp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
IstB_IS21
NB-ARC
AAA_lid_PRS2_C
nSTAND_NTPase5
TsaE
AAA_24
ResIII
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
132854386
NCBI-ProteinID:
XP_060738726
LinkDB
All DBs
Position
12:21448086..21457962
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNINWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPIAKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
GGPSQGSAGGSGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcggagaatctaaaaacgatgacctttctactgctattctaaaacaaaag
aacagacccaacaggttgattgttgatgaatccatcaatgaagataacagtgtggtctcc
ctctctcaggccaagatggatgagcttcagcttttcaggggggacactgtgctgatgaag
ggcaagaaaaggagggagaccgtttgcatcgtactgtcagacgatagctgctctgatgag
aaagtgcgcatgaacagggtggtgcgcaataacctcagggttcgtctcggggatgtcatc
agcattcagccatgcccagatgtgaagtatgggaaacgcatccatgttctgcccattgat
gacacagtggagggaatcactggcaacttatttgaggtgtacctgaagccttacttccta
gaggcttaccgaccaatccgtaaaggtgatatcttcctggtcagaggaggcatgcgtgct
gttgagtttaaagtggtagagactgaccctagtccttactgtattgtggctccagacact
gtcattcactgtgaaggagaacctattaagcgtgaggacgaagaagaatccctgaatgaa
gtaggctatgatgacattggaggtgtgaggaagcagctggctcagatcaaagaaatggtg
gagctgccactcagacacccagcactcttcaaggccattggtgtgaaacctcctcgtggt
attcttctctacggaccccctggaactggaaaaactctgattgctcgtgctgttgcaaat
gaaactggagcattcttcttcctgatcaatggccctgaaattatgagcaaactggccggt
gagtccgagagcaacctgcgtaaagcttttgaagaagctgagaagaacgctcctgccatc
atcttcattgatgaattggatgctattgcacccaagagagagaagactcatggtgaagta
gagaggcgcatcgtgtctcagctgctcaccctgatggacggactgaagcagcgggctcac
gtcatcgtcatggctgccaccaacagacccaacagcatcgacccagctctaaggagattt
ggacgctttgacagagaggtggacattggcattcctgatgctacaggcagactggaaatc
ctgcagatccacaccaagaacatgaagctggctgatgatgttgacctggagcaggttgcc
aacgagacccatggtcatgttggtgctgatttggctgccctgtgctcagaggctgcactg
caggccatccgcaagaagatggacctcattgacttggaggacgagacaattgatgcagag
gtcatgaattccctggctgtcaccatggatgactttaggtgggccctgagccagagcaac
ccatcagccctgcgtgagactgtggttgaggtgcccaacatcaactgggaggacattggt
ggactggatgatgtcaagagagaactgcaggaactggtgcagtacccagtggagcatcca
gataaattcctgaagtttggaatgaccccatctaagggtgtgttgttctatgggccgcca
ggttgtggtaaaaccctcctggccaaggccattgcaaatgagtgccaggccaacttcatt
tccatcaaaggtcctgaactgctaaccatgtggtttggagaatctgaggctaatgttcga
gaaatctttgataaggctcgtcaagctgccccctgtgttctcttctttgatgagctggac
tccattgctaaagcccgtggtggaagcgttggtgatggtggtggagcagctgaccgtgtc
attaaccagatcctgaccgagatggatggcatgtccagcaagaagaacgtcttcatcatt
ggtgccaccaacaggccggatattattgaccctgccatcctcaggcctggccgcttggac
cagcttatctatatcccactgcccgatgagaaatcccgcatggccatcctcaaggctaac
ctcaggaagtcaccaatcgccaaggatgtagatctggactacctggccaagatgaccaac
ggcttctctggagctgacttgacagaaatttgccagagagcctgtaaactggctattcgt
gagtctatcgagaacgagatcaggagggaacgtgagaggcagacaaacccatcagccatg
gaggtggaggaggacgacccagtgcctgagatcaggaaggaccactttgaggaggcaatg
cgtttcgcccgtcgctctgtcagtgacaacgacattcgcaaatacgagatgtttgcacag
acactgcagcaaagcagaggcttcggcagcttcagattcccttccggtaatcagggagga
ggtggaccaagccaaggttctgcaggtggcagcggcgggaacgtctttaacgaggacaac
gacgatgacctttacggataa
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