Tachysurus vachellii: 132854416
Help
Entry
132854416 CDS
T09596
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvc00535
]
132854416 (cspg4ba)
04091 Lectins [BR:
tvc04091
]
132854416 (cspg4ba)
Proteoglycans [BR:
tvc00535
]
Cell surface proteoglycans
Others
132854416 (cspg4ba)
Lectins [BR:
tvc04091
]
C-Type lectins
Others
132854416 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TM_ErbB1
TMEM154
Jag_N
DUF3377
YajC
Motif
Other DBs
NCBI-GeneID:
132854416
NCBI-ProteinID:
XP_060738779
LinkDB
All DBs
Position
12:20699076..20723993
Genome browser
AA seq
2383 aa
AA seq
DB search
MKTLLSYGLLLFFVGVARGASFYGDGFVQLKVKDSTHSSINSLHIRFRTSSQRGVLFLAA
GQTDYLLLELSTGRLQAKLDLGSGEQILHSDKGNPLNDLAWHAVDLIHDQFNVTLTVDKH
FQTSKTLFGSQQQLDISDGLYIGGTGGLDKVYLPNDLTGFRGCLDEVLFNQNNLISSLRP
YSGIKNVYEVSLGCSPQFFANEEDAISFFSSRAYISLPPWSTQQEWTLECSVHTSAQEGI
IMYNSAREGGFVAMEIHNGLLVAVVGRDGMRMELRSLTFINDKKWHYVKLYFTSKSLQLT
IDGETVKSGMKSRSKPLQLKGFLFLGGVDDGTRSEVRKFGLSSVAGKRIKGGSFKGCFRD
IKVNGILTGLPNALVTKDVSVGCEPEKEPQVSTTDGSLVFESVTQLPSIDMSTLAKGLVA
GHGQNFLQLRDLVVPEGGRASLESKHIKVNLDFKKLGIRQSQIMFRIEEQPVHGQLRFDV
DQEQEGNTFSMLDLWHGRIMYIHGGSEDPHDYFMFSIFSSSRKVTPSYLKAEKLYRFNVT
VTATNDAPELSLPEGNLFVLLENSRKRLTTDVLKATDVDSSSTDLVYSVLGNLNADAGFL
ETEDNPGQAVNSFPHSALEAGKINYAHTGVKNSRIVLRVSDGEKISNTVVLRIMAVKLEY
SISNNTGVEVTQGEASLINNTQLAIQTNAVRQAVDIRYDVVEPPRFGELQKLHSNGEWKL
TDSFSQRVLEKDRLRYRSTFKDIQTANVTDNFTCKVTIASKATKELVFNIKTKWIHYTLE
RNEVLKMDKIRRVPIDSEHLFARTHGVDLTEDQIYFKLLSSPKKGLILLNNKKLSANSTF
SQMNITNMEVLYQLIDRPYENTSDKFEFQVFSKHSHSPSHVFRINIRADINSVYIKNNGL
SVSEGESKLITNNELFAETLGTKEIYYTLTEMPKHGKLARINLSNSTKQYDNLVSFTNQD
IIEERLMYVHDDSETTHDQFRFTASTSPLLKGLISEESGSKDGVFNITIQLVNDEKPVRI
VDKVFHVVKNGQRLLTLDDLCYHDADSDFSDGQLVYTRRGIPIGDLVLVNDTSHKLYQFY
QEDLEQKQVLFVHRGINSGRFVLFVSDGKHYISTLLDISAQEPYLKVANNTGLLVQKGQT
RTFSSANFSVVTNTDIREDREISFKIHDAPKHGALFIKDQRIDVFTQYELKNALLSYRHD
GSNILSEFFTVIVKAKGLHVEARINVKVYLESHQKPPVLHNNKILVVDEGKPVKIERSKL
EVTHEANLPSEIIFTVIVSPGYGYLRRFHNGKEQFQGIEQDPLLTFTQQDINSGNIQYVQ
ITPEQMNDSFVLEASNGVAELSGIIMSVEIIPHYIPIEVSNITLKEGASKALTEDIIRVT
SPHFSGLHFVYYVSEGPMHGHIENSRFPGTPTTYFTRKQVEQEFIYYVHDNSETFQDYFT
VIANATDLRKHSTPRTVYVQVTPVNDKPPVITANKALRVWVSSITEITPEDLHAEDDDTA
PEQLHYLTTQPSNGHLALKSAPIRPVMNFTQAHIDQGQLLFVHSGATAGGFNFQVNDGVN
FAPRQIFSVTARTLVVRMERSGPLKVFPGASSSISKEVLSAATNDNESNSNRTIVFTIVK
PPKFGKLVTVQADSSITEISSFTQELVDDGKVAYEQTVDSVGWAALDKFTFTVSSPPASL
EAQTFDIDISYENTGPERNTLLLKNTGGMVIEGDKVIIDKTMLDASNLLTKQPESRRNSY
DVWYQVKSLPQHGVIVVGERNLTKEKPYFSQFILNKYGITYQHDNSETIQDRFVFNAFLN
LKSKPAHRPEDDREVLEEMFNITVTPVNDQPPVLKTKAPSLKVVQGDTVALGPSNLNVED
LDNSPDDIQYSVISRPSNGFLSLAGSLNISVDSFSQAQINKGEVFFIQDGSPASGVFYFS
VTDGHHRPVYKLFNLEVLKIAISIVNKTDLILEQGQTTVVLNQSHLAAVTNGKNTTVQYK
ITAPPNYGKLLLDDEEVTLFNQDDLQAHRLSYHMVNLASSHDDFEFIAFTSEANLTDQIV
NITVKPLIRYAEGVKFSNGIRVKLKAAFLNVSELALISGSDPLFEILSPPTYGKILKAGM
EKKAEPVKTFFFSELQQEKLTIELNANLTEVQEVKDSLRFVLKAGNLQPANGEFVFSVVP
YDPALMTTTTAISLYTSTTASPSQTTVMISPLISKSPLIRPSDLVTKAVPKFKGRNRWGN
SNLNDSHATTRLKPTYSQEIVPVRNQPVRVESVSESSSSSNPMLIILPLLALLLVVIVVI
LALLLRRKQQKKKKHSNGSFASKSCPDSRHFQGHPQRTATVPLVTVTPLSPSNPGSPALM
RPQTGNPACEQSMTLCSFGNMDLDATQFCRTTNPTLQHNQYWV
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttactttcttacgggttgctgttgttttttgtcggagtggcccgaggagct
tccttttatggcgatggatttgtgcagttaaaggtgaaagattcgactcactcttcaatc
aactcgctccacatccgcttccgcacgtctagtcagagaggtgtgctcttcctggctgca
gggcaaactgattacctgctgctggaactcagcactggcagactgcaggcaaagttggat
cttggttctggcgagcagattctacactccgacaaaggcaacccactgaacgacttggct
tggcacgcagtagatcttattcatgaccaatttaacgtaaccctaactgtggacaagcat
ttccagaccagcaagacactttttggctcacagcaacaactggatataagcgatggttta
tatattggtgggacaggaggtttggataaggtctatctccctaatgatctcaccggcttc
cgtggttgccttgatgaagtgctgtttaatcagaacaacctcatttcatcacttagacca
tactctggcataaagaatgtctatgaggtttctcttggttgtagtccacagttctttgct
aatgaagaagacgcaatcagctttttcagttccagggcatacatctctcttcctccttgg
tccacacagcaagagtggactcttgaatgctcagtacatacatcagctcaagagggaatc
attatgtacaattctgctcgagaagggggctttgttgccatggagattcacaacggctta
cttgttgctgtggtgggcagagacgggatgagaatggagctgcgctctcttacttttatc
aacgacaagaagtggcactatgttaagctttacttcacttctaaaagcttgcagctgacc
atcgatggggagactgtgaagtctggcatgaaatccagatcaaaacccttgcaattgaaa
ggtttccttttcctcggtggtgtagatgatggcacacgctctgaagtcagaaagtttggc
ctgtcatcagtggcaggaaagcgcattaaaggtggctctttcaaaggatgctttagagat
attaaggtcaatggtattttaacaggtctcccaaatgctttggtaaccaaagacgtctca
gttggctgtgaaccagaaaaggaacctcaggttagcaccactgatgggagtctggttttt
gaatctgtcactcagttaccgtctatagatatgtccacgcttgcaaagggtctggttgcc
gggcatggacaaaattttttgcagcttagggaccttgttgtacccgagggcggtcgtgca
tcactggaatcaaaacacatcaaagtgaacctggatttcaagaagctcggcatccgtcag
tcgcagatcatgtttagaatcgaagagcagccggtgcacggtcagctaaggtttgatgtg
gaccaggagcaagaaggaaatacgttcagtatgttggatctgtggcatggcagaatcatg
tacatccatggaggttctgaagatccacatgactacttcatgttctccatcttctccagt
agcagaaaagtaacaccaagctacctcaaagcagagaagttgtacagattcaatgtgacc
gtaacagcaaccaatgatgcccctgaattgagtttgcctgagggaaatctatttgttctc
cttgagaactctaggaagagattaaccactgatgtgttgaaagccacagatgtagatagc
agctccaccgacttggtctactctgtattgggaaatcttaatgctgatgccgggtttttg
gaaactgaagataaccctggtcaggcagtcaattcattccctcattcagctctggaagct
ggaaaaatcaactatgcacacactggagtaaagaactcaaggatagtgttaagggttagt
gatggagagaagataagcaacacggtggtgctacgaattatggcagttaaattggaatac
agcatttcaaataacactggggtggaggtcactcaaggagaagcgtctctaataaacaac
acacagctagcaattcagacaaacgcagtaagacaagccgtagacatccgttacgacgtt
gttgagccgccacggtttggagagcttcagaaacttcattcaaacggagaatggaagttg
accgattctttttctcaacgcgttctggagaaagatcgtctgagataccgcagcaccttt
aaggatattcagacggctaatgtgaccgataacttcacgtgtaaggtcacgatcgcatca
aaggcaacaaaggaactggtgtttaatataaagaccaaatggatacattatacattggag
agaaatgaagtacttaaaatggacaaaatcaggagagttccaattgattcagagcatctc
tttgcaaggacacacggcgtggatctaactgaagatcagatttatttcaagcttctgtct
tccccaaagaaagggttgattttgctgaataataaaaagttaagtgctaattctacattt
agccaaatgaacatcactaacatggaagtgttgtatcaactgatcgatagaccgtacgag
aacacaagtgacaagtttgaatttcaagtattcagcaagcattctcattcacctagtcat
gtattcaggataaatatcagagcagatatcaacagcgtttacataaaaaacaacggactt
tcagtttctgaaggcgaaagcaaacttattacaaacaacgaactgtttgctgagactctg
ggtactaaagaaatctactacacactcacagagatgccaaaacatggcaaactagcgcgt
atcaatctgtccaactcaaccaagcaatatgacaatctggtgtcttttaccaaccaggat
attatagaagagcgcctcatgtacgtccatgatgacagcgaaacaactcacgatcagttc
agatttacagcttcgacaagtccgctgctaaagggtcttatcagtgaagagtcgggctcc
aaagacggtgtcttcaacatcactatacagttagtgaatgatgagaagcctgttcgaatt
gtagataaagtgttccatgtcgtcaaaaatggacaaaggctgttgacgctggatgacttg
tgctaccacgatgcagactcggacttcagtgacggtcagctagtttatacccgccgcggg
atccctataggcgatctagtgcttgtcaatgacacatctcataaactctaccagttctac
caagaggacctggaacagaagcaagtgttgtttgttcatcgtgggatcaactctggccgc
ttcgtgcttttcgtatcagatggcaagcactacatttcaaccttgttggatatcagtgct
caggaaccatacttaaaggttgccaacaatactggcttgttggtccaaaaaggtcagacc
agaacattcagcagcgctaattttagtgtggttacaaacacggatatcagagaagaccgc
gaaatcagttttaagatccatgacgccccaaaacatggtgccttgtttataaaagaccag
agaattgacgtttttacgcagtatgaactgaagaatgctttgttgtcatatcgccacgat
ggcagcaatattttgtctgaatttttcacggtcattgtcaaagcaaaagggttgcatgtg
gaagccaggatcaatgtaaaggtttacttggaaagccaccaaaagccacctgtcttacac
aacaacaaaatcttagtggtggacgaaggaaagccggtgaagattgaacgtagtaaactt
gaggttactcatgaagcaaatttgcccagtgaaataatcttcactgttatagtttctcca
ggttacggatatctgcgacgatttcataacggtaaagaacagttccaggggattgagcag
gaccctttattgacctttacacagcaagacattaacagtgggaatatccagtatgtccag
ataacgcccgaacagatgaacgactccttcgttctggaagccagcaacggggtagcagaa
ctgagtggcatcattatgtctgtagagatcattcctcactacatacctatcgaagtctcc
aatataacactgaaagaaggagcatccaaagcgctaacagaagacatcatacgagttacc
agtccgcatttctctgggctccactttgtgtactacgtgtcagagggaccaatgcatgga
cacatcgagaactctcgtttcccagggactcctacaacatattttaccagaaaacaggtg
gagcaggagtttatctactatgtccatgacaactctgagacattccaggactacttcact
gttatagccaatgccacggatctccgaaaacacagcactcccaggacagtgtatgtccaa
gtcacaccagtcaatgacaaacctccggttatcacggccaacaaagcgctcagggtttgg
gtcagctccataacagagatcactcctgaagatctgcatgcggaggatgacgatacagct
ccagagcagctacattacctcaccactcaacccagtaacgggcacctggctctgaaaagt
gctcccattagaccagtcatgaacttcactcaggctcacatagatcagggacaactactg
ttcgtgcacagcggagccacggctggagggtttaacttccaggtgaacgatggcgtgaac
tttgctccgaggcagatattcagcgtgacggctcgtacgcttgttgtccgtatggaaagg
agcggcccgctcaaggtgtttccaggcgcttcatcctccatttcaaaagaagtcctcagt
gcagcaaccaacgacaatgaaagcaattcaaaccgcaccattgttttcaccattgttaag
cccccgaaatttggaaagctggtgactgtgcaggcagacagttctatcactgagatttct
tccttcacacaggaactggtcgatgatggtaaagtggcatacgaacaaaccgtggactct
gtcggatgggcagcattagacaagttcacgttcaccgtgtcatcacctcctgcaagcctt
gaggctcagacctttgatatcgacatctcttacgaaaatacagggcctgaaagaaacact
cttcttcttaaaaacacaggaggtatggtaatagaaggagacaaagtcatcattgacaaa
acaatgctggatgcatcaaatctcctcaccaaacagccagagtctcgtcgcaactcctac
gatgtctggtaccaggtcaagtctttacctcagcatggtgtcatcgttgtgggtgaacgg
aatcttacaaaggaaaagccctatttctctcagtttattctgaacaaatatggaataacc
taccagcacgacaactccgagaccatacaagaccgctttgtcttcaacgctttccttaac
ctgaagagcaaacctgcacatcgtcctgaggatgaccgtgaagtgttagaggaaatgttt
aacattacagtcactccagtgaatgatcagccaccagtcctgaaaaccaaagctccaagc
ctcaaagtcgttcagggagacactgtggctcttggacccagcaacctgaatgtggaagac
cttgacaactctccagatgatatccagtactctgtgattagcagacctagcaacggcttc
ctttctctcgctggaagtctaaacatttctgtggatagcttttctcaagcccagatcaac
aagggtgaagtattctttatccaagatggcagccctgcatctggggtgttctatttcagt
gtcactgatggtcatcatcggccagtctacaaacttttcaacctagaggtgttgaagatc
gccatttcaattgtcaataaaacagatttgatattggaacaggggcaaacaacagtggtg
ctcaaccagtcacacctggctgcagtgactaatggaaaaaacactactgtccaatataaa
ataactgctcctcctaactatggtaaacttctcttggacgacgaagaagttacccttttt
aatcaggatgatttgcaagcacatagattaagttaccatatggtcaatcttgcatcctct
catgatgactttgagttcatcgccttcacctcagaggcaaacctgactgaccagatagtt
aacataacagttaagcctttaattaggtatgcagaaggtgtaaagttctcaaatggaatt
cgtgttaagctcaaggcggcctttctcaacgtctctgaacttgctctgattagtggtagt
gatccattgttcgaaattctgtccccaccaacgtatggcaagattttaaaggctggcatg
gagaaaaaagcagaacctgtaaagacatttttctttagtgaattacagcaggaaaaactt
accatcgaattaaatgccaatctaaccgaagttcaagaggtgaaagactcattaagattt
gtcctaaaagctggcaatcttcaacctgcaaacggggagttcgtctttagcgttgtgcca
tatgaccctgctctcatgacaacgacgacagctatctcactgtacacaagtactactgct
tcacccagccaaaccacagttatgatctctcctctcatttccaaatctccattaattcgg
ccatcagacctggtcaccaaggctgtgccaaagttcaagggccgtaatcgctggggtaac
tcaaacctcaatgactcacatgccacaactaggcttaaaccaacatatagtcaggaaatt
gttccagttaggaaccaaccagtgagggttgagtcagtgtctgagagtagctcctcttcc
aaccccatgctcatcatcctcccactgctcgctcttctgcttgtggtcattgtagtcata
ttggcattactactgaggcgaaagcagcagaaaaagaaaaaacattcgaatggttccttt
gcttctaaatcctgccctgatagtagacactttcaaggacatccacagaggactgcaacg
gttcctttagtaactgtaacccctctcagcccaagcaaccctggtagtcctgctctgatg
agaccccagacaggaaaccctgcctgtgagcagtctatgactctgtgctcctttggcaac
atggatcttgacgccactcagttttgcaggaccacaaaccccacattgcagcacaatcag
tactgggtgtga
DBGET
integrated database retrieval system
