Tachysurus vachellii: 132854513
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Entry
132854513 CDS
T09596
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132854513 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132854513 (sh3rf1)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132854513 (sh3rf1)
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132854513 (sh3rf1)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132854513 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
132854513
NCBI-ProteinID:
XP_060738955
LinkDB
All DBs
Position
12:complement(4661931..4704054)
Genome browser
AA seq
873 aa
AA seq
DB search
MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGV
DELPSNILLVRLLDGIKQRPWRAGTACTNGSAGGGVREHASTGPQPQRAQTKSTTVRGVP
QLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEVGGVHGFFPASFVQVIKPL
PQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDQNWAEGMLGDKIGIFPISYV
EFNSAARQLIELDKAPDDTAEGTSSSSSSSSSSNSSSGPQANGTQKASGEKKNSKKRHSF
TSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSSSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPPETSYASIPVDNLPPPPPPPPQSSSVGAASSLAAGQRPSP
TASDQSGRQRPTVYVAMFPYTPRKDDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTVASSSQPKVPLAMCSQAGRGVTVVSSSSSPIGVALAGIDPNKPLPVCTG
HTPSSPIPAAVVTAAHIPPGQHPKVLMHVTSQMTVNQARNAVRTAVCHNQDRPTAAVTPI
QSQNAMAFLTHLAVCPQPAPGSSSASNPASSRMGVAMGCAAASLTPPNISAASLEVDGMR
PTAMVSLPVAPGNTKPLGATAANQAPACKLDKREKKGLLKLLSNKKKLRPSPPSSPTLET
EQAAAADMPQGAMAPEQPLSNPTAAASGNHCRIGPCPMESDSPAPPSSSSSSSSSSNTET
ARRTGCQENSAPIAPPPRQPCSSLLSVQHDGRPIVCERYRVVVSYPPQSEAELELKEGDI
VFVHKKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcggccctgctggatctgcttgagtgcccggtgtgcctagaacggctggac
gccaccgctaaggtcctgccatgccagcatactttctgccgccgctgcctgcttggcatt
gtgggatcgcgtggcgagctgcggtgccctgaatgccgcacgcttgtggaaagcggcgtg
gacgagttgcccagtaacatcctcctcgtgaggctgcttgatggcatcaagcaacgaccc
tggcgagccggaacggcttgtaccaacggctcggctggcgggggggttcgagagcatgcc
agcacaggaccacagccccaaagagctcagaccaaaagcacaacggtcaggggagtaccc
caactcccctgcgccaaggccttgtacaactacgatggcaaggaacctggcgacctcaag
ttcagcaagggtgacatcatcatccttcgccggcaggttgacgagaactggtaccacggc
gaagtgggcggagtgcatggcttcttcccggccagcttcgtgcaggtgatcaagccactt
ccacagccgccgccccagtgcaaagccctgtatgactttgagctgaaggacaaagaggcg
gacaaggactgccttcccttctcgaaggacgacattctgacagtaattcgacgtgtggac
cagaactgggctgagggaatgctgggagataagattggcatcttccccatatcttatgta
gagtttaactcggccgcacgacagctcatcgagctcgacaaggcgccagacgacactgcc
gaaggcacttcctcctcatcctcttcctcctcctcctccaactcgtcctctggaccccaa
gccaacggcacccaaaaagcgtcgggggagaaaaagaacagcaagaagcgccactcgttc
acctcgctgaccatgtcccataagccgtgcctggcaccaccaccacagcgccactccatg
gagatcagcggacccgttctcattagctcctcgaacccgacagcagctgcacgcatcgga
gagctcagcggggggttgtcctccagcgccccctcgcaggttcacatttgcacaacagga
ctcatcgtcacgccacctccaagcagtcctgtaacgacggccacggtcttcacttttcct
ccagagaccagctacgcctccatcccagtggacaatttgcctcctcctccacctcctccc
ccacaatcctcctctgtgggtgcggcgtcgtcgctggccgcgggacagaggccgtccccc
actgcaagcgaccagagcggacgccagagaccaactgtgtatgttgcgatgttcccatac
acaccccgtaaggatgacgagctggagctaagaaagggcgagatgttcctggtgctggag
cgctgtcaggacggctggtttaaaggaacgtccatgcacaccggcaagatcggagttttt
cccggcaactacatgagtcctgttagcaggacggttgcgagcagcagtcagcccaaagtt
cctttagcgatgtgctcgcaggccggacgtggcgtcaccgttgtcagctcctcgtcctct
cccattggagtggctctggctggcattgaccccaacaagccccttcctgtttgcacaggc
cacaccccttcaagccccatccctgcagctgtagtcacggcagcccacattccacctggt
cagcatccgaaagtgctcatgcacgtgacgtcacagatgacggtgaaccaggcacgcaat
gctgtgaggactgccgtgtgccacaatcaggaccgccctactgcagccgtaacgccaatc
cagtcccagaacgccatggctttcctgactcaccttgctgtgtgtccgcagccagcacct
ggtagtagctccgcctccaaccctgcgtcaagcagaatgggagtggctatgggctgtgct
gccgcctcacttaccccacccaacatcagcgctgcttctctggaggtcgatggcatgaga
cccaccgccatggtgtcgctcccggtcgctcctggcaacaccaagcctctcggtgccaca
gcagcaaatcaggctcctgcttgtaaactagacaagagggagaagaaaggcctgttgaag
ctgttgtccaataaaaagaaactccgcccatctccaccctcatctccgactctggagacg
gagcaagccgctgctgccgacatgcctcaaggagccatggcacctgaacagcccttgtcc
aatccaacagcagcagccagtggaaaccactgcaggatcggaccctgtcccatggaatca
gactcacctgcacctccatcatcatcgtcatcatcatcatcatcatcaaatactgagact
gcacgcaggactggctgtcaggaaaactccgctcctattgcaccgccaccacggcagcca
tgctcctctctgctttctgtgcagcacgatggacggccaatagtgtgcgagaggtaccgt
gtggtggtgtcgtaccctccacagagcgaggccgagctggagctgaaggagggcgacatc
gtgttcgtgcacaagaagcgtgaggacggctggttcaaaggcacgctccagaggaacggc
aggacgggcctctttcccggcagctttgtcgacagcatctga
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