Tachysurus vachellii: 132854548
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Entry
132854548 CDS
T09596
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvc03016
]
132854548 (trmt13)
Enzymes [BR:
tvc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
132854548 (trmt13)
Transfer RNA biogenesis [BR:
tvc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132854548 (trmt13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
132854548
NCBI-ProteinID:
XP_060739012
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All DBs
Position
1:complement(31222755..31228642)
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AA seq
468 aa
AA seq
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MELSCILDWAKMAAVTSDGVSAPLPGRCGFYVVKKKRYCKMVVGKGKTFCGEHGNADSDS
ERKRIPCPLDPKHTVFEDSLSKHLKKCNSKEKPKPVYYVKDINAGSVTEEEIAIDEVSIA
ERSKEELYRLIQKLKTAVKGLNTEPDTSLLSHPALNEALNDPKNGNFAFKHLKQQASILG
NMEALELLGPERCYVEFGAGKGKLSHWIHVALQEAENVHFLLVERSSTRFKVDGKHKNTD
STFDRLQVDIQHLDLSRVPFLQEKQLPVIAVGKHLCGAATDLALRCLFERSAKDKDNEPP
TKRIKLQEGGEEVMQGSESSEEVVVSGLTVALCCHHRCEWRHYVGKDFFRERGLGATEFS
AFQRMSSWATCGMNRVKSSLNPEKSSHDIKYEEEGEEVEHEGSSENFPDHLNNAISAEER
ERVGRLCKMLIDHGRLHYLQQRGFKPSLRFYTSWDVSLENVLLTALPS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagctgcattttggattgggccaaaatggcggctgtcacttcagacggagtc
tcagctcctttacctggaagatgcggtttttacgtggttaaaaagaaacgttattgcaaa
atggtagttggaaaagggaaaacgttttgcggtgaacacggaaatgcggattcagacagc
gagagaaaacggatcccctgccctctggacccaaagcacactgtgtttgaggacagtttg
tcaaaacacctaaagaagtgtaattcgaaggaaaagcccaaacctgtctattatgtgaaa
gacatcaatgctgggtctgtaaccgaagaggaaattgccatagatgaggtgtccattgct
gagcgatctaaagaagagctatatcgtcttatacagaaattgaagactgcagtgaaagga
ttaaacacggagcctgacactagccttctctctcatccggctttaaacgaagctcttaat
gatcccaagaatgggaactttgcttttaaacaccttaagcagcaggcctcgatcttgggg
aatatggaggctctggagctgcttgggccagagaggtgttatgtggagtttggtgctgga
aaaggtaaactttcccactggattcatgttgcccttcaggaagcagaaaatgtccacttc
ctgttagtggagagatccagtactcgctttaaggtagatggcaaacacaaaaacacagac
tcaaccttcgacaggctgcaggttgacattcagcaccttgacttaagcagagttccgttt
ttacaagaaaagcaacttcctgtaattgcagtgggcaaacacttatgtggcgcagcaaca
gatttggctctgcggtgtttatttgagcgcagtgcaaaagacaaagacaatgagcctccc
actaaacgtataaaactgcaggaaggaggtgaggaggtgatgcagggttctgaaagcagt
gaggaggttgtagtatcggggctcactgttgcactctgctgccatcatcgctgtgaatgg
aggcattatgttggaaaggattttttcagagaacgaggtcttggagccaccgagttttct
gctttccagcgcatgtccagctgggctacatgtggcatgaacagagtcaaatcctcctta
aatcctgagaaatcctcacatgatatcaagtatgaagaagaaggagaagaggttgaacat
gaagggagttctgaaaactttcctgatcatctcaacaatgccatttcagcagaggagcgt
gaacgtgtcggacgcctgtgcaagatgctgatcgaccacggcaggctgcattacctccag
cagcgaggcttcaaacccagcctcagattttacaccagttgggacgtgtctttagagaat
gtgcttctgactgcacttcccagctaa
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